EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000013821 (Gene tree)
Gene ID: 516289
Gene Symbol: RIOK1
Alias: -
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 17158 bases
Position: chr23:47942974-47960131
Accession: 50051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000018366	RIO1	PF01163.22	1.2e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000018366	-	1707	-	ENSBTAP00000018366	568 (aa)	XP_002697645	E1B887

Gene Model

Click here to download ENSBTAG00000013821's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000013821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000013821	RIOK1	53	43.450	ENSBTAG00000010042	RIOK3	59	43.450

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000013821	RIOK1	100	88.732	ENSG00000124784	RIOK1	100	88.732	Homo_sapiens
ENSBTAG00000013821	RIOK1	57	67.593	ENSAPOG00000015632	riok1	99	67.593	Acanthochromis_polyacanthus
ENSBTAG00000013821	RIOK1	100	89.104	ENSAMEG00000017367	RIOK1	100	88.928	Ailuropoda_melanoleuca
ENSBTAG00000013821	RIOK1	88	70.942	ENSACIG00000003735	riok1	85	72.141	Amphilophus_citrinellus
ENSBTAG00000013821	RIOK1	99	65.901	ENSAOCG00000011818	riok1	100	64.818	Amphiprion_ocellaris
ENSBTAG00000013821	RIOK1	99	66.314	ENSAPEG00000001345	riok1	100	65.225	Amphiprion_percula
ENSBTAG00000013821	RIOK1	82	71.058	ENSATEG00000006594	riok1	99	71.058	Anabas_testudineus
ENSBTAG00000013821	RIOK1	84	80.793	ENSAPLG00000004196	RIOK1	100	82.463	Anas_platyrhynchos
ENSBTAG00000013821	RIOK1	100	75.088	ENSACAG00000000695	RIOK1	100	75.131	Anolis_carolinensis
ENSBTAG00000013821	RIOK1	100	77.465	ENSANAG00000023777	RIOK1	100	78.345	Aotus_nancymaae
ENSBTAG00000013821	RIOK1	99	66.075	ENSACLG00000015799	riok1	99	66.489	Astatotilapia_calliptera
ENSBTAG00000013821	RIOK1	99	66.667	ENSAMXG00000015286	riok1	83	75.000	Astyanax_mexicanus
ENSBTAG00000013821	RIOK1	81	48.268	WBGene00019698	riok-1	85	46.694	Caenorhabditis_elegans
ENSBTAG00000013821	RIOK1	100	87.500	ENSCJAG00000042960	RIOK1	100	87.852	Callithrix_jacchus
ENSBTAG00000013821	RIOK1	100	88.576	ENSCAFG00000009563	RIOK1	100	87.873	Canis_familiaris
ENSBTAG00000013821	RIOK1	96	86.496	ENSCAFG00020013233	RIOK1	98	85.766	Canis_lupus_dingo
ENSBTAG00000013821	RIOK1	100	96.479	ENSCHIG00000001534	RIOK1	100	96.479	Capra_hircus
ENSBTAG00000013821	RIOK1	66	87.798	ENSTSYG00000011368	RIOK1	100	91.131	Carlito_syrichta
ENSBTAG00000013821	RIOK1	79	88.667	ENSCAPG00000008489	RIOK1	100	88.362	Cavia_aperea
ENSBTAG00000013821	RIOK1	98	83.813	ENSCPOG00000009882	RIOK1	100	84.211	Cavia_porcellus
ENSBTAG00000013821	RIOK1	100	88.028	ENSCCAG00000024061	RIOK1	100	88.380	Cebus_capucinus
ENSBTAG00000013821	RIOK1	100	87.500	ENSCATG00000001548	RIOK1	100	87.852	Cercocebus_atys
ENSBTAG00000013821	RIOK1	100	86.819	ENSCLAG00000003522	RIOK1	100	87.522	Chinchilla_lanigera
ENSBTAG00000013821	RIOK1	94	86.842	ENSCSAG00000007396	RIOK1	98	87.218	Chlorocebus_sabaeus
ENSBTAG00000013821	RIOK1	85	77.673	ENSCHOG00000001873	RIOK1	85	77.673	Choloepus_hoffmanni
ENSBTAG00000013821	RIOK1	94	75.376	ENSCPBG00000008685	RIOK1	91	75.376	Chrysemys_picta_bellii
ENSBTAG00000013821	RIOK1	100	87.852	ENSCANG00000032919	RIOK1	100	88.204	Colobus_angolensis_palliatus
ENSBTAG00000013821	RIOK1	100	79.049	ENSCGRG00001018868	Riok1	100	79.049	Cricetulus_griseus_chok1gshd
ENSBTAG00000013821	RIOK1	100	79.049	ENSCGRG00000008015	Riok1	100	79.049	Cricetulus_griseus_crigri
ENSBTAG00000013821	RIOK1	88	50.000	ENSCSEG00000015014	riok1	84	50.932	Cynoglossus_semilaevis
ENSBTAG00000013821	RIOK1	57	65.951	ENSCVAG00000011291	riok1	99	65.951	Cyprinodon_variegatus
ENSBTAG00000013821	RIOK1	99	68.078	ENSDARG00000016399	riok1	100	68.617	Danio_rerio
ENSBTAG00000013821	RIOK1	100	85.340	ENSDNOG00000015813	RIOK1	100	85.689	Dasypus_novemcinctus
ENSBTAG00000013821	RIOK1	100	85.789	ENSDORG00000008530	Riok1	100	85.614	Dipodomys_ordii
ENSBTAG00000013821	RIOK1	77	53.348	FBgn0036187	RIOK1	82	52.642	Drosophila_melanogaster
ENSBTAG00000013821	RIOK1	100	83.627	ENSETEG00000020273	RIOK1	100	83.099	Echinops_telfairi
ENSBTAG00000013821	RIOK1	99	62.014	ENSEBUG00000013672	riok1	85	68.098	Eptatretus_burgeri
ENSBTAG00000013821	RIOK1	94	89.098	ENSEASG00005012032	RIOK1	94	89.098	Equus_asinus_asinus
ENSBTAG00000013821	RIOK1	100	89.085	ENSECAG00000009007	RIOK1	100	89.085	Equus_caballus
ENSBTAG00000013821	RIOK1	77	74.773	ENSEEUG00000007123	RIOK1	100	74.773	Erinaceus_europaeus
ENSBTAG00000013821	RIOK1	99	64.757	ENSELUG00000017029	riok1	99	66.904	Esox_lucius
ENSBTAG00000013821	RIOK1	100	87.937	ENSFCAG00000027290	RIOK1	100	87.762	Felis_catus
ENSBTAG00000013821	RIOK1	100	76.667	ENSFALG00000013244	RIOK1	100	76.708	Ficedula_albicollis
ENSBTAG00000013821	RIOK1	100	86.116	ENSFDAG00000019139	RIOK1	100	86.643	Fukomys_damarensis
ENSBTAG00000013821	RIOK1	66	77.719	ENSFHEG00000021419	riok1	83	77.719	Fundulus_heteroclitus
ENSBTAG00000013821	RIOK1	73	70.702	ENSGMOG00000018668	riok1	92	73.028	Gadus_morhua
ENSBTAG00000013821	RIOK1	58	74.848	ENSGALG00000012795	RIOK1	100	78.626	Gallus_gallus
ENSBTAG00000013821	RIOK1	90	58.095	ENSGAFG00000004091	riok1	79	62.762	Gambusia_affinis
ENSBTAG00000013821	RIOK1	97	63.884	ENSGACG00000002496	riok1	95	70.766	Gasterosteus_aculeatus
ENSBTAG00000013821	RIOK1	82	79.526	ENSGAGG00000002262	RIOK1	98	78.233	Gopherus_agassizii
ENSBTAG00000013821	RIOK1	100	73.592	ENSGGOG00000011037	RIOK1	100	73.592	Gorilla_gorilla
ENSBTAG00000013821	RIOK1	100	82.777	ENSHGLG00000008699	RIOK1	100	83.304	Heterocephalus_glaber_female
ENSBTAG00000013821	RIOK1	100	82.953	ENSHGLG00100008188	RIOK1	100	83.480	Heterocephalus_glaber_male
ENSBTAG00000013821	RIOK1	88	68.651	ENSHCOG00000013275	riok1	91	69.777	Hippocampus_comes
ENSBTAG00000013821	RIOK1	99	68.056	ENSIPUG00000003290	riok1	100	68.056	Ictalurus_punctatus
ENSBTAG00000013821	RIOK1	100	85.589	ENSSTOG00000009289	RIOK1	100	85.413	Ictidomys_tridecemlineatus
ENSBTAG00000013821	RIOK1	100	83.803	ENSJJAG00000015152	Riok1	100	83.803	Jaculus_jaculus
ENSBTAG00000013821	RIOK1	68	75.578	ENSKMAG00000019378	riok1	99	75.578	Kryptolebias_marmoratus
ENSBTAG00000013821	RIOK1	88	70.541	ENSLBEG00000016650	riok1	84	72.234	Labrus_bergylta
ENSBTAG00000013821	RIOK1	100	64.767	ENSLACG00000000300	RIOK1	100	65.398	Latimeria_chalumnae
ENSBTAG00000013821	RIOK1	99	70.641	ENSLOCG00000011728	riok1	99	70.723	Lepisosteus_oculatus
ENSBTAG00000013821	RIOK1	99	86.299	ENSLAFG00000005504	RIOK1	100	85.765	Loxodonta_africana
ENSBTAG00000013821	RIOK1	100	87.148	ENSMFAG00000029990	RIOK1	100	87.500	Macaca_fascicularis
ENSBTAG00000013821	RIOK1	100	86.972	ENSMMUG00000015577	RIOK1	100	87.324	Macaca_mulatta
ENSBTAG00000013821	RIOK1	100	83.803	ENSMNEG00000034396	RIOK1	99	88.362	Macaca_nemestrina
ENSBTAG00000013821	RIOK1	100	87.676	ENSMLEG00000026327	RIOK1	100	88.028	Mandrillus_leucophaeus
ENSBTAG00000013821	RIOK1	98	65.530	ENSMAMG00000019557	riok1	99	66.429	Mastacembelus_armatus
ENSBTAG00000013821	RIOK1	99	65.542	ENSMZEG00005019482	riok1	99	66.844	Maylandia_zebra
ENSBTAG00000013821	RIOK1	100	72.902	ENSMGAG00000003816	RIOK1	100	74.868	Meleagris_gallopavo
ENSBTAG00000013821	RIOK1	100	80.106	ENSMAUG00000012751	Riok1	100	79.754	Mesocricetus_auratus
ENSBTAG00000013821	RIOK1	100	88.204	ENSMICG00000044301	RIOK1	84	88.204	Microcebus_murinus
ENSBTAG00000013821	RIOK1	100	78.697	ENSMOCG00000017032	Riok1	100	78.697	Microtus_ochrogaster
ENSBTAG00000013821	RIOK1	84	62.745	ENSMMOG00000020598	riok1	87	63.137	Mola_mola
ENSBTAG00000013821	RIOK1	100	76.389	ENSMODG00000009964	RIOK1	100	75.648	Monodelphis_domestica
ENSBTAG00000013821	RIOK1	88	63.327	ENSMALG00000019982	riok1	89	65.618	Monopterus_albus
ENSBTAG00000013821	RIOK1	99	79.679	MGP_CAROLIEiJ_G0018439	Riok1	99	79.857	Mus_caroli
ENSBTAG00000013821	RIOK1	99	79.004	ENSMUSG00000021428	Riok1	99	79.181	Mus_musculus
ENSBTAG00000013821	RIOK1	99	78.966	MGP_PahariEiJ_G0019507	Riok1	99	79.323	Mus_pahari
ENSBTAG00000013821	RIOK1	99	79.144	MGP_SPRETEiJ_G0019319	Riok1	99	79.323	Mus_spretus
ENSBTAG00000013821	RIOK1	100	87.215	ENSMPUG00000000570	RIOK1	100	87.215	Mustela_putorius_furo
ENSBTAG00000013821	RIOK1	100	88.225	ENSMLUG00000015312	RIOK1	100	88.401	Myotis_lucifugus
ENSBTAG00000013821	RIOK1	100	86.444	ENSNGAG00000021734	Riok1	100	86.444	Nannospalax_galili
ENSBTAG00000013821	RIOK1	75	75.352	ENSNBRG00000017489	riok1	82	74.884	Neolamprologus_brichardi
ENSBTAG00000013821	RIOK1	100	78.873	ENSNLEG00000011621	RIOK1	100	78.873	Nomascus_leucogenys
ENSBTAG00000013821	RIOK1	84	52.521	ENSMEUG00000006679	-	84	53.361	Notamacropus_eugenii
ENSBTAG00000013821	RIOK1	65	84.636	ENSOPRG00000009524	RIOK1	100	84.636	Ochotona_princeps
ENSBTAG00000013821	RIOK1	71	74.314	ENSODEG00000005663	RIOK1	100	74.314	Octodon_degus
ENSBTAG00000013821	RIOK1	98	67.318	ENSONIG00000014010	riok1	98	67.254	Oreochromis_niloticus
ENSBTAG00000013821	RIOK1	82	84.698	ENSOANG00000012553	RIOK1	100	84.698	Ornithorhynchus_anatinus
ENSBTAG00000013821	RIOK1	100	84.710	ENSOCUG00000011824	RIOK1	100	84.710	Oryctolagus_cuniculus
ENSBTAG00000013821	RIOK1	98	67.500	ENSORLG00000008221	riok1	99	67.143	Oryzias_latipes
ENSBTAG00000013821	RIOK1	98	65.171	ENSORLG00020013838	riok1	70	65.591	Oryzias_latipes_hni
ENSBTAG00000013821	RIOK1	98	66.786	ENSORLG00015009817	riok1	98	67.143	Oryzias_latipes_hsok
ENSBTAG00000013821	RIOK1	98	66.068	ENSOMEG00000002758	riok1	88	66.905	Oryzias_melastigma
ENSBTAG00000013821	RIOK1	100	78.772	ENSOGAG00000010192	RIOK1	100	78.809	Otolemur_garnettii
ENSBTAG00000013821	RIOK1	100	96.655	ENSOARG00000017747	RIOK1	100	96.655	Ovis_aries
ENSBTAG00000013821	RIOK1	100	78.559	ENSPPAG00000016349	RIOK1	100	87.768	Pan_paniscus
ENSBTAG00000013821	RIOK1	100	87.762	ENSPPRG00000001932	RIOK1	100	86.888	Panthera_pardus
ENSBTAG00000013821	RIOK1	100	87.937	ENSPTIG00000018545	RIOK1	100	87.762	Panthera_tigris_altaica
ENSBTAG00000013821	RIOK1	100	88.556	ENSPTRG00000017700	RIOK1	100	88.556	Pan_troglodytes
ENSBTAG00000013821	RIOK1	100	87.676	ENSPANG00000016522	RIOK1	100	88.028	Papio_anubis
ENSBTAG00000013821	RIOK1	99	67.776	ENSPKIG00000006442	riok1	88	74.134	Paramormyrops_kingsleyae
ENSBTAG00000013821	RIOK1	100	77.641	ENSPSIG00000006488	RIOK1	99	78.207	Pelodiscus_sinensis
ENSBTAG00000013821	RIOK1	70	72.658	ENSPMGG00000017807	riok1	96	68.333	Periophthalmus_magnuspinnatus
ENSBTAG00000013821	RIOK1	100	80.282	ENSPEMG00000017844	Riok1	100	80.106	Peromyscus_maniculatus_bairdii
ENSBTAG00000013821	RIOK1	71	68.447	ENSPMAG00000006351	riok1	98	67.146	Petromyzon_marinus
ENSBTAG00000013821	RIOK1	94	76.394	ENSPCIG00000012653	RIOK1	94	76.735	Phascolarctos_cinereus
ENSBTAG00000013821	RIOK1	98	61.828	ENSPFOG00000011532	riok1	99	62.903	Poecilia_formosa
ENSBTAG00000013821	RIOK1	98	62.745	ENSPLAG00000001341	riok1	99	63.214	Poecilia_latipinna
ENSBTAG00000013821	RIOK1	98	61.828	ENSPMEG00000007710	riok1	99	63.082	Poecilia_mexicana
ENSBTAG00000013821	RIOK1	98	62.903	ENSPREG00000009237	riok1	99	63.441	Poecilia_reticulata
ENSBTAG00000013821	RIOK1	100	88.576	ENSPPYG00000016207	RIOK1	100	89.455	Pongo_abelii
ENSBTAG00000013821	RIOK1	100	72.007	ENSPCAG00000007892	RIOK1	100	71.831	Procavia_capensis
ENSBTAG00000013821	RIOK1	100	87.741	ENSPVAG00000014091	RIOK1	100	88.616	Pteropus_vampyrus
ENSBTAG00000013821	RIOK1	58	69.725	ENSPNYG00000004465	riok1	100	70.336	Pundamilia_nyererei
ENSBTAG00000013821	RIOK1	99	66.321	ENSPNAG00000015435	riok1	99	67.434	Pygocentrus_nattereri
ENSBTAG00000013821	RIOK1	99	80.036	ENSRNOG00000014049	Riok1	100	86.422	Rattus_norvegicus
ENSBTAG00000013821	RIOK1	100	87.324	ENSRBIG00000036685	RIOK1	100	87.676	Rhinopithecus_bieti
ENSBTAG00000013821	RIOK1	100	87.500	ENSRROG00000036611	RIOK1	100	87.852	Rhinopithecus_roxellana
ENSBTAG00000013821	RIOK1	59	42.120	YOR119C	RIO1	96	38.323	Saccharomyces_cerevisiae
ENSBTAG00000013821	RIOK1	100	88.732	ENSSBOG00000012588	RIOK1	100	88.732	Saimiri_boliviensis_boliviensis
ENSBTAG00000013821	RIOK1	85	78.980	ENSSHAG00000003091	RIOK1	93	78.528	Sarcophilus_harrisii
ENSBTAG00000013821	RIOK1	90	71.569	ENSSFOG00015001035	riok1	99	68.929	Scleropages_formosus
ENSBTAG00000013821	RIOK1	58	64.526	ENSSDUG00000007291	riok1	100	64.832	Seriola_dumerili
ENSBTAG00000013821	RIOK1	98	66.487	ENSSLDG00000017657	riok1	99	66.548	Seriola_lalandi_dorsalis
ENSBTAG00000013821	RIOK1	86	68.107	ENSSPUG00000007624	RIOK1	83	68.107	Sphenodon_punctatus
ENSBTAG00000013821	RIOK1	99	67.908	ENSSPAG00000022710	riok1	100	68.093	Stegastes_partitus
ENSBTAG00000013821	RIOK1	100	86.972	ENSSSCG00000001024	RIOK1	100	86.268	Sus_scrofa
ENSBTAG00000013821	RIOK1	100	76.307	ENSTGUG00000002331	RIOK1	100	76.708	Taeniopygia_guttata
ENSBTAG00000013821	RIOK1	52	62.081	ENSTRUG00000001575	-	100	62.081	Takifugu_rubripes
ENSBTAG00000013821	RIOK1	73	63.484	ENSTRUG00000002854	riok1	94	65.026	Takifugu_rubripes
ENSBTAG00000013821	RIOK1	99	60.417	ENSTNIG00000003078	riok1	99	60.633	Tetraodon_nigroviridis
ENSBTAG00000013821	RIOK1	100	83.099	ENSTBEG00000016730	RIOK1	100	82.746	Tupaia_belangeri
ENSBTAG00000013821	RIOK1	73	100.000	ENSTTRG00000017335	RIOK1	87	100.000	Tursiops_truncatus
ENSBTAG00000013821	RIOK1	94	88.555	ENSUAMG00000003721	RIOK1	96	88.555	Ursus_americanus
ENSBTAG00000013821	RIOK1	100	88.928	ENSUMAG00000018461	RIOK1	100	89.455	Ursus_maritimus
ENSBTAG00000013821	RIOK1	70	86.254	ENSVPAG00000010813	-	73	86.254	Vicugna_pacos
ENSBTAG00000013821	RIOK1	100	88.225	ENSVVUG00000005018	RIOK1	100	87.522	Vulpes_vulpes
ENSBTAG00000013821	RIOK1	88	73.547	ENSXETG00000020436	riok1	86	74.897	Xenopus_tropicalis
ENSBTAG00000013821	RIOK1	84	65.336	ENSXCOG00000000245	riok1	100	67.017	Xiphophorus_couchianus
ENSBTAG00000013821	RIOK1	70	74.436	ENSXMAG00000014572	riok1	82	71.132	Xiphophorus_maculatus