EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000013947 (Gene tree)
Gene ID: 359714
Gene Symbol: APTX
Alias: -
Full Name: Bos taurus aprataxin (APTX)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 15737 bases
Position: chr8:74749188-74764924
Accession: NM_182654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000018534	DcpS_C	PF11969.8	2.3e-34	1	1
ENSBTAP00000042890	DcpS_C	PF11969.8	2.4e-34	1	1
ENSBTAP00000066152	DcpS_C	PF11969.8	2.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000076513	-	1080	-	ENSBTAP00000066152	359 (aa)	-	-
ENSBTAT00000018534	-	1668	-	ENSBTAP00000018534	347 (aa)	-	Q5EA08
ENSBTAT00000045509	-	1201	-	ENSBTAP00000042890	356 (aa)	-	F1MVI2

Gene Model

Click here to download ENSBTAG00000013947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000013947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000013947	APTX	99	89.244	ENSG00000137074	APTX	100	89.181	Homo_sapiens
ENSBTAG00000013947	APTX	98	58.944	ENSAPOG00000008785	aptx	100	58.944	Acanthochromis_polyacanthus
ENSBTAG00000013947	APTX	99	88.953	ENSAMEG00000007648	APTX	97	88.953	Ailuropoda_melanoleuca
ENSBTAG00000013947	APTX	98	53.488	ENSACIG00000002035	aptx	100	53.488	Amphilophus_citrinellus
ENSBTAG00000013947	APTX	98	59.824	ENSAOCG00000000634	aptx	100	59.824	Amphiprion_ocellaris
ENSBTAG00000013947	APTX	98	59.824	ENSAPEG00000017253	aptx	100	59.824	Amphiprion_percula
ENSBTAG00000013947	APTX	98	56.598	ENSATEG00000017383	aptx	100	56.598	Anabas_testudineus
ENSBTAG00000013947	APTX	89	60.248	ENSAPLG00000015645	APTX	99	61.342	Anas_platyrhynchos
ENSBTAG00000013947	APTX	99	60.807	ENSACAG00000003581	APTX	96	60.807	Anolis_carolinensis
ENSBTAG00000013947	APTX	99	88.663	ENSANAG00000030160	APTX	100	86.486	Aotus_nancymaae
ENSBTAG00000013947	APTX	98	59.292	ENSACLG00000018887	aptx	100	59.292	Astatotilapia_calliptera
ENSBTAG00000013947	APTX	98	58.187	ENSAMXG00000039899	aptx	99	58.187	Astyanax_mexicanus
ENSBTAG00000013947	APTX	99	87.209	ENSCJAG00000007940	APTX	100	87.172	Callithrix_jacchus
ENSBTAG00000013947	APTX	99	88.953	ENSCAFG00000001812	APTX	100	88.889	Canis_familiaris
ENSBTAG00000013947	APTX	99	88.889	ENSCAFG00020015598	APTX	100	88.889	Canis_lupus_dingo
ENSBTAG00000013947	APTX	99	97.368	ENSCHIG00000012896	APTX	100	97.368	Capra_hircus
ENSBTAG00000013947	APTX	99	87.135	ENSTSYG00000003041	APTX	100	87.135	Carlito_syrichta
ENSBTAG00000013947	APTX	60	92.683	ENSCAPG00000013470	APTX	100	92.683	Cavia_aperea
ENSBTAG00000013947	APTX	98	85.924	ENSCPOG00000005975	APTX	100	92.391	Cavia_porcellus
ENSBTAG00000013947	APTX	99	87.755	ENSCCAG00000036783	APTX	100	87.755	Cebus_capucinus
ENSBTAG00000013947	APTX	99	89.244	ENSCATG00000042639	APTX	100	87.288	Cercocebus_atys
ENSBTAG00000013947	APTX	99	85.380	ENSCLAG00000012185	APTX	100	90.761	Chinchilla_lanigera
ENSBTAG00000013947	APTX	99	89.535	ENSCSAG00000009885	APTX	99	88.732	Chlorocebus_sabaeus
ENSBTAG00000013947	APTX	99	64.972	ENSCPBG00000023973	APTX	98	63.912	Chrysemys_picta_bellii
ENSBTAG00000013947	APTX	96	38.440	ENSCING00000008741	-	98	36.997	Ciona_intestinalis
ENSBTAG00000013947	APTX	96	40.496	ENSCSAVG00000008038	-	97	40.111	Ciona_savignyi
ENSBTAG00000013947	APTX	99	88.921	ENSCANG00000037253	APTX	100	88.889	Colobus_angolensis_palliatus
ENSBTAG00000013947	APTX	98	83.871	ENSCGRG00001000705	Aptx	99	91.111	Cricetulus_griseus_chok1gshd
ENSBTAG00000013947	APTX	98	83.871	ENSCGRG00000014159	Aptx	99	91.111	Cricetulus_griseus_crigri
ENSBTAG00000013947	APTX	97	57.692	ENSCSEG00000009549	aptx	99	57.692	Cynoglossus_semilaevis
ENSBTAG00000013947	APTX	98	57.227	ENSCVAG00000011942	aptx	99	57.227	Cyprinodon_variegatus
ENSBTAG00000013947	APTX	97	56.509	ENSDARG00000027143	aptx	99	57.396	Danio_rerio
ENSBTAG00000013947	APTX	99	88.663	ENSDNOG00000018498	APTX	99	86.761	Dasypus_novemcinctus
ENSBTAG00000013947	APTX	99	83.815	ENSDORG00000002139	Aptx	100	90.761	Dipodomys_ordii
ENSBTAG00000013947	APTX	52	40.449	FBgn0038704	CG5316	87	47.541	Drosophila_melanogaster
ENSBTAG00000013947	APTX	80	85.612	ENSETEG00000012459	APTX	78	85.612	Echinops_telfairi
ENSBTAG00000013947	APTX	98	46.832	ENSEBUG00000013914	aptx	97	47.934	Eptatretus_burgeri
ENSBTAG00000013947	APTX	98	88.235	ENSEASG00005004566	APTX	99	88.235	Equus_asinus_asinus
ENSBTAG00000013947	APTX	99	87.719	ENSECAG00000012674	APTX	92	87.719	Equus_caballus
ENSBTAG00000013947	APTX	84	83.562	ENSEEUG00000010693	APTX	100	82.680	Erinaceus_europaeus
ENSBTAG00000013947	APTX	99	88.889	ENSFCAG00000008728	APTX	100	88.889	Felis_catus
ENSBTAG00000013947	APTX	98	63.037	ENSFALG00000001230	APTX	100	63.037	Ficedula_albicollis
ENSBTAG00000013947	APTX	99	83.041	ENSFDAG00000013752	APTX	100	90.217	Fukomys_damarensis
ENSBTAG00000013947	APTX	81	54.514	ENSFHEG00000021328	aptx	73	54.514	Fundulus_heteroclitus
ENSBTAG00000013947	APTX	97	56.047	ENSGMOG00000012505	aptx	99	56.047	Gadus_morhua
ENSBTAG00000013947	APTX	98	60.795	ENSGALG00000001954	APTX	100	60.795	Gallus_gallus
ENSBTAG00000013947	APTX	98	57.771	ENSGAFG00000005086	aptx	100	57.771	Gambusia_affinis
ENSBTAG00000013947	APTX	98	57.353	ENSGACG00000017887	aptx	99	57.353	Gasterosteus_aculeatus
ENSBTAG00000013947	APTX	98	65.169	ENSGAGG00000013230	APTX	100	64.543	Gopherus_agassizii
ENSBTAG00000013947	APTX	85	87.755	ENSGGOG00000014232	APTX	99	80.592	Gorilla_gorilla
ENSBTAG00000013947	APTX	98	59.292	ENSHBUG00000021058	aptx	100	59.292	Haplochromis_burtoni
ENSBTAG00000013947	APTX	99	83.333	ENSHGLG00000015093	APTX	100	89.130	Heterocephalus_glaber_female
ENSBTAG00000013947	APTX	99	84.503	ENSHGLG00100013482	APTX	100	89.130	Heterocephalus_glaber_male
ENSBTAG00000013947	APTX	98	58.407	ENSHCOG00000018216	aptx	96	58.407	Hippocampus_comes
ENSBTAG00000013947	APTX	98	59.767	ENSIPUG00000017548	aptx	99	59.767	Ictalurus_punctatus
ENSBTAG00000013947	APTX	98	85.924	ENSSTOG00000005185	APTX	100	90.761	Ictidomys_tridecemlineatus
ENSBTAG00000013947	APTX	98	78.006	ENSJJAG00000015653	Aptx	100	78.006	Jaculus_jaculus
ENSBTAG00000013947	APTX	98	58.358	ENSKMAG00000000117	aptx	100	58.358	Kryptolebias_marmoratus
ENSBTAG00000013947	APTX	98	58.551	ENSLBEG00000015353	aptx	99	58.551	Labrus_bergylta
ENSBTAG00000013947	APTX	98	51.261	ENSLBEG00000021489	APTX	99	51.261	Labrus_bergylta
ENSBTAG00000013947	APTX	98	59.384	ENSLACG00000003376	APTX	99	60.452	Latimeria_chalumnae
ENSBTAG00000013947	APTX	99	61.690	ENSLOCG00000011556	aptx	99	61.690	Lepisosteus_oculatus
ENSBTAG00000013947	APTX	99	88.663	ENSLAFG00000005665	APTX	100	88.663	Loxodonta_africana
ENSBTAG00000013947	APTX	99	89.766	ENSMFAG00000043141	APTX	100	87.819	Macaca_fascicularis
ENSBTAG00000013947	APTX	99	89.535	ENSMMUG00000007724	APTX	100	87.571	Macaca_mulatta
ENSBTAG00000013947	APTX	99	89.181	ENSMNEG00000042341	APTX	100	89.181	Macaca_nemestrina
ENSBTAG00000013947	APTX	99	89.181	ENSMLEG00000035137	APTX	100	89.181	Mandrillus_leucophaeus
ENSBTAG00000013947	APTX	98	56.140	ENSMAMG00000018377	aptx	100	56.140	Mastacembelus_armatus
ENSBTAG00000013947	APTX	98	58.997	ENSMZEG00005022621	aptx	100	58.997	Maylandia_zebra
ENSBTAG00000013947	APTX	52	74.033	ENSMGAG00000005736	APTX	100	74.033	Meleagris_gallopavo
ENSBTAG00000013947	APTX	98	83.186	ENSMAUG00000006039	Aptx	99	89.617	Mesocricetus_auratus
ENSBTAG00000013947	APTX	99	88.986	ENSMICG00000006603	APTX	98	88.986	Microcebus_murinus
ENSBTAG00000013947	APTX	98	82.006	ENSMOCG00000000869	Aptx	99	90.556	Microtus_ochrogaster
ENSBTAG00000013947	APTX	98	60.588	ENSMMOG00000007028	aptx	99	60.588	Mola_mola
ENSBTAG00000013947	APTX	99	62.784	ENSMODG00000003365	APTX	100	62.784	Monodelphis_domestica
ENSBTAG00000013947	APTX	98	52.507	ENSMALG00000003828	aptx	99	52.507	Monopterus_albus
ENSBTAG00000013947	APTX	80	90.164	MGP_CAROLIEiJ_G0025897	-	99	90.164	Mus_caroli
ENSBTAG00000013947	APTX	98	83.529	ENSMUSG00000028411	Aptx	99	91.803	Mus_musculus
ENSBTAG00000013947	APTX	98	82.647	MGP_PahariEiJ_G0024020	Aptx	99	82.647	Mus_pahari
ENSBTAG00000013947	APTX	98	83.529	MGP_SPRETEiJ_G0026846	Aptx	97	83.529	Mus_spretus
ENSBTAG00000013947	APTX	99	88.596	ENSMPUG00000004290	APTX	100	88.596	Mustela_putorius_furo
ENSBTAG00000013947	APTX	99	90.698	ENSMLUG00000016081	APTX	97	89.714	Myotis_lucifugus
ENSBTAG00000013947	APTX	99	82.799	ENSNGAG00000016314	Aptx	100	89.130	Nannospalax_galili
ENSBTAG00000013947	APTX	98	58.702	ENSNBRG00000014199	aptx	100	58.702	Neolamprologus_brichardi
ENSBTAG00000013947	APTX	99	89.213	ENSNLEG00000032184	APTX	100	89.181	Nomascus_leucogenys
ENSBTAG00000013947	APTX	99	63.006	ENSMEUG00000004153	APTX	99	63.006	Notamacropus_eugenii
ENSBTAG00000013947	APTX	84	79.661	ENSOPRG00000012403	APTX	99	78.105	Ochotona_princeps
ENSBTAG00000013947	APTX	99	86.297	ENSODEG00000015832	-	100	90.217	Octodon_degus
ENSBTAG00000013947	APTX	98	68.915	ENSODEG00000000097	-	100	70.381	Octodon_degus
ENSBTAG00000013947	APTX	98	58.358	ENSONIG00000014541	aptx	83	58.358	Oreochromis_niloticus
ENSBTAG00000013947	APTX	84	62.745	ENSOANG00000009878	APTX	98	62.745	Ornithorhynchus_anatinus
ENSBTAG00000013947	APTX	81	92.350	ENSOCUG00000025059	-	95	92.350	Oryctolagus_cuniculus
ENSBTAG00000013947	APTX	98	87.353	ENSOCUG00000000738	-	99	86.942	Oryctolagus_cuniculus
ENSBTAG00000013947	APTX	98	56.571	ENSORLG00000006237	aptx	100	56.571	Oryzias_latipes
ENSBTAG00000013947	APTX	98	57.143	ENSORLG00020021478	aptx	100	57.143	Oryzias_latipes_hni
ENSBTAG00000013947	APTX	98	57.895	ENSORLG00015021873	aptx	100	57.895	Oryzias_latipes_hsok
ENSBTAG00000013947	APTX	100	49.724	ENSOMEG00000007875	aptx	97	49.724	Oryzias_melastigma
ENSBTAG00000013947	APTX	99	85.797	ENSOGAG00000005388	APTX	99	84.463	Otolemur_garnettii
ENSBTAG00000013947	APTX	99	97.965	ENSOARG00000009598	APTX	97	97.965	Ovis_aries
ENSBTAG00000013947	APTX	99	89.213	ENSPPAG00000030295	APTX	100	87.288	Pan_paniscus
ENSBTAG00000013947	APTX	99	89.181	ENSPPRG00000017524	APTX	100	89.181	Panthera_pardus
ENSBTAG00000013947	APTX	99	89.181	ENSPTIG00000020000	APTX	100	89.181	Panthera_tigris_altaica
ENSBTAG00000013947	APTX	99	89.213	ENSPTRG00000020850	APTX	100	89.181	Pan_troglodytes
ENSBTAG00000013947	APTX	99	89.244	ENSPANG00000025301	APTX	100	87.288	Papio_anubis
ENSBTAG00000013947	APTX	97	59.654	ENSPKIG00000013601	aptx	99	59.654	Paramormyrops_kingsleyae
ENSBTAG00000013947	APTX	100	66.379	ENSPSIG00000010521	APTX	99	65.915	Pelodiscus_sinensis
ENSBTAG00000013947	APTX	97	55.977	ENSPMGG00000018649	aptx	99	55.977	Periophthalmus_magnuspinnatus
ENSBTAG00000013947	APTX	98	83.824	ENSPEMG00000007747	Aptx	99	89.617	Peromyscus_maniculatus_bairdii
ENSBTAG00000013947	APTX	98	46.398	ENSPMAG00000008417	aptx	99	45.763	Petromyzon_marinus
ENSBTAG00000013947	APTX	98	67.806	ENSPCIG00000029852	APTX	100	67.806	Phascolarctos_cinereus
ENSBTAG00000013947	APTX	98	57.434	ENSPFOG00000004992	aptx	100	57.434	Poecilia_formosa
ENSBTAG00000013947	APTX	98	57.726	ENSPFOG00000005131	-	99	57.726	Poecilia_formosa
ENSBTAG00000013947	APTX	98	57.726	ENSPLAG00000007906	aptx	100	57.726	Poecilia_latipinna
ENSBTAG00000013947	APTX	98	57.726	ENSPLAG00000007960	APTX	100	57.726	Poecilia_latipinna
ENSBTAG00000013947	APTX	98	58.017	ENSPMEG00000018504	aptx	100	58.017	Poecilia_mexicana
ENSBTAG00000013947	APTX	98	57.726	ENSPMEG00000019789	APTX	100	57.726	Poecilia_mexicana
ENSBTAG00000013947	APTX	98	53.079	ENSPREG00000004375	aptx	100	53.079	Poecilia_reticulata
ENSBTAG00000013947	APTX	99	89.826	ENSPPYG00000019142	APTX	99	88.732	Pongo_abelii
ENSBTAG00000013947	APTX	99	73.761	ENSPCAG00000010014	APTX	100	73.761	Procavia_capensis
ENSBTAG00000013947	APTX	99	90.643	ENSPCOG00000016780	APTX	100	90.643	Propithecus_coquereli
ENSBTAG00000013947	APTX	99	88.338	ENSPVAG00000011468	APTX	100	86.798	Pteropus_vampyrus
ENSBTAG00000013947	APTX	98	59.292	ENSPNYG00000007675	aptx	100	59.292	Pundamilia_nyererei
ENSBTAG00000013947	APTX	97	55.294	ENSPNAG00000015984	aptx	99	55.294	Pygocentrus_nattereri
ENSBTAG00000013947	APTX	98	79.706	ENSRNOG00000006582	Aptx	99	79.706	Rattus_norvegicus
ENSBTAG00000013947	APTX	99	88.663	ENSRBIG00000042913	APTX	100	88.596	Rhinopithecus_bieti
ENSBTAG00000013947	APTX	99	88.630	ENSRROG00000035395	APTX	100	88.596	Rhinopithecus_roxellana
ENSBTAG00000013947	APTX	99	88.889	ENSSBOG00000025215	APTX	100	88.889	Saimiri_boliviensis_boliviensis
ENSBTAG00000013947	APTX	99	67.251	ENSSHAG00000012205	APTX	96	67.251	Sarcophilus_harrisii
ENSBTAG00000013947	APTX	97	63.714	ENSSFOG00015009267	aptx	99	63.714	Scleropages_formosus
ENSBTAG00000013947	APTX	98	58.651	ENSSMAG00000008839	aptx	100	58.651	Scophthalmus_maximus
ENSBTAG00000013947	APTX	98	59.238	ENSSDUG00000001989	aptx	100	59.238	Seriola_dumerili
ENSBTAG00000013947	APTX	98	58.944	ENSSLDG00000004915	aptx	100	58.944	Seriola_lalandi_dorsalis
ENSBTAG00000013947	APTX	99	64.903	ENSSPUG00000008994	APTX	87	65.084	Sphenodon_punctatus
ENSBTAG00000013947	APTX	98	59.531	ENSSPAG00000020373	aptx	100	59.531	Stegastes_partitus
ENSBTAG00000013947	APTX	99	90.643	ENSSSCG00000011001	APTX	100	90.643	Sus_scrofa
ENSBTAG00000013947	APTX	99	61.671	ENSTGUG00000001441	APTX	100	61.671	Taeniopygia_guttata
ENSBTAG00000013947	APTX	98	57.817	ENSTRUG00000009794	aptx	99	57.817	Takifugu_rubripes
ENSBTAG00000013947	APTX	97	58.112	ENSTNIG00000010570	aptx	98	58.112	Tetraodon_nigroviridis
ENSBTAG00000013947	APTX	99	81.214	ENSTBEG00000008504	APTX	99	80.682	Tupaia_belangeri
ENSBTAG00000013947	APTX	93	86.747	ENSTTRG00000007384	APTX	100	86.747	Tursiops_truncatus
ENSBTAG00000013947	APTX	99	89.181	ENSUAMG00000003700	APTX	99	88.406	Ursus_americanus
ENSBTAG00000013947	APTX	99	88.418	ENSUMAG00000005837	APTX	99	89.412	Ursus_maritimus
ENSBTAG00000013947	APTX	78	89.362	ENSVPAG00000001297	APTX	80	89.362	Vicugna_pacos
ENSBTAG00000013947	APTX	99	88.889	ENSVVUG00000021130	APTX	100	88.889	Vulpes_vulpes
ENSBTAG00000013947	APTX	98	59.885	ENSXETG00000024143	aptx	99	59.078	Xenopus_tropicalis
ENSBTAG00000013947	APTX	98	56.022	ENSXCOG00000005020	aptx	100	56.022	Xiphophorus_couchianus
ENSBTAG00000013947	APTX	98	58.065	ENSXMAG00000022086	aptx	97	58.065	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0090305	nucleic acid phosphodiester bond hydrolysis	-	IEA	Process
GO:0120108	DNA-3'-diphospho-5'-guanosine diphosphatase	-	IEA	Function