EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSBTAG00000014129 (Gene tree)
Gene ID
539150
Gene Symbol
RAB5B
Alias
-
Full Name
Bos taurus RAB5B%2C member RAS oncogene family (RAB5B)%2C mRNA.
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Minus strand
Length
15586 bases
Position
chr5:57321765-57337350
Accession
NM_001206191
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000018777MMR_HSR1PF01926.230.0001811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000018777-3312XM_005206651ENSBTAP00000018777215 (aa)XP_005206708F1MNI4
Gene Model
Click here to download ENSBTAG00000014129's gene model file
Pathways
Pathway IDPathway NameSource
bta04014Ras signaling pathwayKEGG
bta04144EndocytosisKEGG
bta04145PhagosomeKEGG
bta04962Vasopressin-regulated water reabsorptionKEGG
bta05146AmoebiasisKEGG
bta05152TuberculosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000014129's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSBTAG00000014129RAB5B8030.994ENSBTAG00000024233-7631.579
ENSBTAG00000014129RAB5B9335.610ENSBTAG00000010923RAB9A9935.610
ENSBTAG00000014129RAB5B7835.882ENSBTAG00000019779RAB39B8035.882
ENSBTAG00000014129RAB5B7842.442ENSBTAG00000010193RAB7A8342.442
ENSBTAG00000014129RAB5B5530.159ENSBTAG00000002869ARL4A6030.159
ENSBTAG00000014129RAB5B8938.342ENSBTAG00000017604RAB139538.342
ENSBTAG00000014129RAB5B6230.986ENSBTAG00000012902ARL8B7330.986
ENSBTAG00000014129RAB5B8134.463ENSBTAG00000017277RAB365434.463
ENSBTAG00000014129RAB5B7837.126ENSBTAG00000004876RABL2B7237.126
ENSBTAG00000014129RAB5B9043.367ENSBTAG00000016720RAB1A9843.367
ENSBTAG00000014129RAB5B8233.333ENSBTAG00000031861RHEB9333.333
ENSBTAG00000014129RAB5B6230.282ENSBTAG00000006574ARL8A7330.282
ENSBTAG00000014129RAB5B9441.860ENSBTAG00000002475RAB11B9641.860
ENSBTAG00000014129RAB5B8339.130ENSBTAG00000003208RAB33B7939.344
ENSBTAG00000014129RAB5B8245.198ENSBTAG00000046485RAB1B5945.198
ENSBTAG00000014129RAB5B7745.181ENSBTAG00000000025RAB6A8045.181
ENSBTAG00000014129RAB5B9047.938ENSBTAG00000018053RAB22A9847.938
ENSBTAG00000014129RAB5B7438.125ENSBTAG00000005362RAB236738.125
ENSBTAG00000014129RAB5B9042.000ENSBTAG00000018914RAB259342.000
ENSBTAG00000014129RAB5B9037.949ENSBTAG00000022044RAB359637.949
ENSBTAG00000014129RAB5B7842.857ENSBTAG00000002417RAB308342.857
ENSBTAG00000014129RAB5B10081.860ENSBTAG00000046385RAB5A10081.860
ENSBTAG00000014129RAB5B7745.783ENSBTAG00000000905RAB6B8045.783
ENSBTAG00000014129RAB5B8042.222ENSBTAG00000009871RAB188339.901
ENSBTAG00000014129RAB5B8237.853ENSBTAG00000003474RAB158337.853
ENSBTAG00000014129RAB5B8940.500ENSBTAG00000050873-9340.500
ENSBTAG00000014129RAB5B9785.646ENSBTAG00000006982RAB5C9785.646
ENSBTAG00000014129RAB5B7538.554ENSBTAG00000034712RAB33A7038.554
ENSBTAG00000014129RAB5B8132.222ENSBTAG00000046644HRAS9432.222
ENSBTAG00000014129RAB5B8535.326ENSBTAG00000010356RAB127535.326
ENSBTAG00000014129RAB5B7530.337ENSBTAG00000046129RAB346230.337
ENSBTAG00000014129RAB5B7632.727ENSBTAG00000009778KRAS9031.579
ENSBTAG00000014129RAB5B7547.205ENSBTAG00000018959RAB11A7547.205
ENSBTAG00000014129RAB5B8331.111ENSBTAG00000046797NRAS9431.111
ENSBTAG00000014129RAB5B7831.765ENSBTAG00000002174RERG8431.765
ENSBTAG00000014129RAB5B7044.667ENSBTAG00000048711-7744.218
ENSBTAG00000014129RAB5B7144.079ENSBTAG00000000948RAB2A8044.079
ENSBTAG00000014129RAB5B9035.323ENSBTAG00000019820RAB9B9735.323
ENSBTAG00000014129RAB5B9040.722ENSBTAG00000044207RAB2B8740.722
ENSBTAG00000014129RAB5B7544.720ENSBTAG00000017803RAB147544.720
ENSBTAG00000014129RAB5B9145.408ENSBTAG00000046533RAB319845.408
ENSBTAG00000014129RAB5B7534.503ENSBTAG00000021525-7834.503
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000014129RAB5B10099.535ENSG00000111540RAB5B100100.000Homo_sapiens
ENSBTAG00000014129RAB5B10098.157ENSAMEG00000003196RAB5B10098.157Ailuropoda_melanoleuca
ENSBTAG00000014129RAB5B10096.279ENSACAG00000005380RAB5B10096.279Anolis_carolinensis
ENSBTAG00000014129RAB5B10099.535ENSANAG00000033215RAB5B9599.535Aotus_nancymaae
ENSBTAG00000014129RAB5B10099.535ENSCJAG00000041780RAB5B9599.535Callithrix_jacchus
ENSBTAG00000014129RAB5B10099.535ENSCAFG00000000087RAB5B10099.535Canis_familiaris
ENSBTAG00000014129RAB5B10099.535ENSCAFG00020026094RAB5B10099.535Canis_lupus_dingo
ENSBTAG00000014129RAB5B9799.519ENSCHIG00000010333RAB5B9699.519Capra_hircus
ENSBTAG00000014129RAB5B10099.070ENSTSYG00000009576RAB5B10099.070Carlito_syrichta
ENSBTAG00000014129RAB5B10099.535ENSCPOG00000034818RAB5B10099.535Cavia_porcellus
ENSBTAG00000014129RAB5B10098.605ENSCCAG00000019480RAB5B10098.605Cebus_capucinus
ENSBTAG00000014129RAB5B8399.441ENSCATG00000034978RAB5B9899.441Cercocebus_atys
ENSBTAG00000014129RAB5B10098.605ENSCSAG00000005277RAB5B10098.605Chlorocebus_sabaeus
ENSBTAG00000014129RAB5B10096.279ENSCPBG00000012712RAB5B10096.279Chrysemys_picta_bellii
ENSBTAG00000014129RAB5B10099.535ENSCGRG00001000428Rab5b10099.535Cricetulus_griseus_chok1gshd
ENSBTAG00000014129RAB5B10099.535ENSCGRG00000009508-10099.535Cricetulus_griseus_crigri
ENSBTAG00000014129RAB5B10099.535ENSDORG00000025063Rab5b10099.535Dipodomys_ordii
ENSBTAG00000014129RAB5B10099.070ENSECAG00000023306RAB5B10099.070Equus_caballus
ENSBTAG00000014129RAB5B10098.605ENSEEUG00000006745RAB5B10098.605Erinaceus_europaeus
ENSBTAG00000014129RAB5B10099.535ENSFDAG00000008326RAB5B10099.535Fukomys_damarensis
ENSBTAG00000014129RAB5B10098.605ENSHGLG00000005995RAB5B10098.605Heterocephalus_glaber_female
ENSBTAG00000014129RAB5B10098.605ENSHGLG00100012955RAB5B10098.605Heterocephalus_glaber_male
ENSBTAG00000014129RAB5B10098.140ENSSTOG00000010536RAB5B10098.140Ictidomys_tridecemlineatus
ENSBTAG00000014129RAB5B10099.070ENSJJAG00000019506Rab5b10099.070Jaculus_jaculus
ENSBTAG00000014129RAB5B10098.618ENSLAFG00000018009RAB5B9598.618Loxodonta_africana
ENSBTAG00000014129RAB5B10098.605ENSMFAG00000029992RAB5B10098.605Macaca_fascicularis
ENSBTAG00000014129RAB5B10098.605ENSMMUG00000031853RAB5B10098.605Macaca_mulatta
ENSBTAG00000014129RAB5B10098.605ENSMNEG00000005338RAB5B10098.605Macaca_nemestrina
ENSBTAG00000014129RAB5B10098.605ENSMLEG00000034462RAB5B10098.605Mandrillus_leucophaeus
ENSBTAG00000014129RAB5B10099.535ENSMAUG00000011613Rab5b10099.535Mesocricetus_auratus
ENSBTAG00000014129RAB5B10099.070ENSMICG00000011086RAB5B10099.070Microcebus_murinus
ENSBTAG00000014129RAB5B10099.535ENSMUSG00000000711Rab5b10099.535Mus_musculus
ENSBTAG00000014129RAB5B10099.535MGP_PahariEiJ_G0031135Rab5b10099.535Mus_pahari
ENSBTAG00000014129RAB5B10099.070MGP_SPRETEiJ_G0016774Rab5b10099.070Mus_spretus
ENSBTAG00000014129RAB5B9998.148ENSMPUG00000000946RAB5B8998.148Mustela_putorius_furo
ENSBTAG00000014129RAB5B10099.535ENSNLEG00000017570-10099.535Nomascus_leucogenys
ENSBTAG00000014129RAB5B10099.535ENSOPRG00000007883RAB5B10099.535Ochotona_princeps
ENSBTAG00000014129RAB5B10099.070ENSODEG00000003860RAB5B10099.070Octodon_degus
ENSBTAG00000014129RAB5B10099.535ENSOCUG00000013895RAB5B9599.535Oryctolagus_cuniculus
ENSBTAG00000014129RAB5B10099.535ENSOARG00000010651RAB5B9599.535Ovis_aries
ENSBTAG00000014129RAB5B10099.535ENSPPAG00000035431RAB5B10099.535Pan_paniscus
ENSBTAG00000014129RAB5B10099.535ENSPTRG00000005071RAB5B9799.043Pan_troglodytes
ENSBTAG00000014129RAB5B9997.664ENSPANG00000021075RAB5B9797.664Papio_anubis
ENSBTAG00000014129RAB5B10099.535ENSPCOG00000016461RAB5B10099.535Propithecus_coquereli
ENSBTAG00000014129RAB5B10098.605ENSRNOG00000006130Rab5b10098.605Rattus_norvegicus
ENSBTAG00000014129RAB5B10098.605ENSRBIG00000013165RAB5B10098.605Rhinopithecus_bieti
ENSBTAG00000014129RAB5B10098.605ENSRROG00000037973RAB5B10098.605Rhinopithecus_roxellana
ENSBTAG00000014129RAB5B10083.256ENSSBOG00000035419RAB5B10083.256Saimiri_boliviensis_boliviensis
ENSBTAG00000014129RAB5B10098.140ENSSHAG00000007727RAB5B10098.140Sarcophilus_harrisii
ENSBTAG00000014129RAB5B10099.535ENSSARG00000006237RAB5B10099.535Sorex_araneus
ENSBTAG00000014129RAB5B10096.279ENSSPUG00000014873RAB5B10096.279Sphenodon_punctatus
ENSBTAG00000014129RAB5B10099.535ENSTTRG00000015001RAB5B10099.535Tursiops_truncatus
ENSBTAG00000014129RAB5B10099.070ENSUAMG00000014651RAB5B10099.070Ursus_americanus
ENSBTAG00000014129RAB5B10099.070ENSUMAG00000016263RAB5B10099.070Ursus_maritimus
ENSBTAG00000014129RAB5B68100.000ENSVVUG00000022054RAB5B81100.000Vulpes_vulpes

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us