EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000014320 (Gene tree)
Gene ID: 617136
Gene Symbol: SRFBP1
Alias: -
Full Name: Bos taurus serum response factor binding protein 1 (SRFBP1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 60479 bases
Position: chr7:31794298-31854776
Accession: NM_001105449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000063913	BUD22	PF09073.10	2.5e-11	1	1
ENSBTAP00000049639	BUD22	PF09073.10	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000053358	-	1254	-	ENSBTAP00000049639	417 (aa)	-	F1MB94
ENSBTAT00000087503	-	1445	-	ENSBTAP00000063913	428 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000014320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000014320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000014320	SRFBP1	100	76.690	ENSG00000151304	SRFBP1	100	76.457	Homo_sapiens
ENSBTAG00000014320	SRFBP1	78	58.000	ENSAPOG00000021469	-	84	37.860	Acanthochromis_polyacanthus
ENSBTAG00000014320	SRFBP1	99	81.340	ENSAMEG00000018050	SRFBP1	99	80.471	Ailuropoda_melanoleuca
ENSBTAG00000014320	SRFBP1	75	69.444	ENSAOCG00000002182	-	83	38.193	Amphiprion_ocellaris
ENSBTAG00000014320	SRFBP1	75	69.444	ENSAPEG00000003041	-	84	38.398	Amphiprion_percula
ENSBTAG00000014320	SRFBP1	99	44.719	ENSACAG00000003779	SRFBP1	99	42.174	Anolis_carolinensis
ENSBTAG00000014320	SRFBP1	100	74.592	ENSANAG00000022485	SRFBP1	100	74.359	Aotus_nancymaae
ENSBTAG00000014320	SRFBP1	99	36.345	ENSACLG00000013909	-	88	36.310	Astatotilapia_calliptera
ENSBTAG00000014320	SRFBP1	100	75.291	ENSCJAG00000017177	SRFBP1	100	74.825	Callithrix_jacchus
ENSBTAG00000014320	SRFBP1	100	80.186	ENSCAFG00000000512	SRFBP1	100	80.186	Canis_familiaris
ENSBTAG00000014320	SRFBP1	100	80.186	ENSCAFG00020009389	SRFBP1	100	80.186	Canis_lupus_dingo
ENSBTAG00000014320	SRFBP1	99	73.317	ENSTSYG00000008630	-	98	73.381	Carlito_syrichta
ENSBTAG00000014320	SRFBP1	99	52.885	ENSTSYG00000006869	-	99	52.885	Carlito_syrichta
ENSBTAG00000014320	SRFBP1	100	71.296	ENSCPOG00000004695	SRFBP1	100	70.602	Cavia_porcellus
ENSBTAG00000014320	SRFBP1	100	75.058	ENSCCAG00000032237	-	100	74.126	Cebus_capucinus
ENSBTAG00000014320	SRFBP1	100	76.224	ENSCATG00000040904	SRFBP1	100	76.224	Cercocebus_atys
ENSBTAG00000014320	SRFBP1	100	70.302	ENSCLAG00000003630	SRFBP1	100	69.838	Chinchilla_lanigera
ENSBTAG00000014320	SRFBP1	100	73.893	ENSCSAG00000014636	SRFBP1	100	75.991	Chlorocebus_sabaeus
ENSBTAG00000014320	SRFBP1	100	75.524	ENSCANG00000041298	SRFBP1	100	75.524	Colobus_angolensis_palliatus
ENSBTAG00000014320	SRFBP1	100	69.070	ENSCGRG00001000718	Srfbp1	98	69.070	Cricetulus_griseus_chok1gshd
ENSBTAG00000014320	SRFBP1	99	68.193	ENSCGRG00000010837	Srfbp1	100	68.193	Cricetulus_griseus_crigri
ENSBTAG00000014320	SRFBP1	79	61.983	ENSCSEG00000011789	-	78	61.983	Cynoglossus_semilaevis
ENSBTAG00000014320	SRFBP1	99	40.984	ENSCVAG00000013010	-	97	40.749	Cyprinodon_variegatus
ENSBTAG00000014320	SRFBP1	75	51.948	ENSDARG00000075323	srfbp1	62	51.948	Danio_rerio
ENSBTAG00000014320	SRFBP1	81	73.451	ENSDNOG00000017733	SRFBP1	100	73.451	Dasypus_novemcinctus
ENSBTAG00000014320	SRFBP1	81	63.018	ENSETEG00000012408	SRFBP1	100	62.722	Echinops_telfairi
ENSBTAG00000014320	SRFBP1	100	81.818	ENSEASG00005012421	SRFBP1	100	81.818	Equus_asinus_asinus
ENSBTAG00000014320	SRFBP1	100	81.075	ENSECAG00000015330	SRFBP1	100	81.075	Equus_caballus
ENSBTAG00000014320	SRFBP1	100	69.464	ENSEEUG00000011514	SRFBP1	100	69.464	Erinaceus_europaeus
ENSBTAG00000014320	SRFBP1	99	38.330	ENSELUG00000018381	-	97	38.065	Esox_lucius
ENSBTAG00000014320	SRFBP1	100	80.841	ENSFCAG00000035118	SRFBP1	100	80.841	Felis_catus
ENSBTAG00000014320	SRFBP1	99	42.009	ENSFALG00000007595	SRFBP1	100	39.091	Ficedula_albicollis
ENSBTAG00000014320	SRFBP1	100	69.053	ENSFDAG00000005102	SRFBP1	100	68.056	Fukomys_damarensis
ENSBTAG00000014320	SRFBP1	76	64.286	ENSFHEG00000000477	-	85	35.524	Fundulus_heteroclitus
ENSBTAG00000014320	SRFBP1	99	45.103	ENSGALG00000005316	SRFBP1	99	45.909	Gallus_gallus
ENSBTAG00000014320	SRFBP1	76	64.286	ENSGAFG00000018777	-	63	57.812	Gambusia_affinis
ENSBTAG00000014320	SRFBP1	99	41.020	ENSGACG00000009055	-	83	41.531	Gasterosteus_aculeatus
ENSBTAG00000014320	SRFBP1	99	45.349	ENSGAGG00000024915	SRFBP1	99	44.186	Gopherus_agassizii
ENSBTAG00000014320	SRFBP1	100	77.389	ENSGGOG00000007725	SRFBP1	100	76.457	Gorilla_gorilla
ENSBTAG00000014320	SRFBP1	86	58.871	ENSIPUG00000014640	srfbp1	87	58.871	Ictalurus_punctatus
ENSBTAG00000014320	SRFBP1	100	73.023	ENSSTOG00000029184	SRFBP1	98	72.326	Ictidomys_tridecemlineatus
ENSBTAG00000014320	SRFBP1	99	62.981	ENSJJAG00000013229	Srfbp1	100	63.680	Jaculus_jaculus
ENSBTAG00000014320	SRFBP1	81	35.475	ENSLACG00000004456	SRFBP1	100	36.034	Latimeria_chalumnae
ENSBTAG00000014320	SRFBP1	100	78.140	ENSLAFG00000015303	SRFBP1	98	78.140	Loxodonta_africana
ENSBTAG00000014320	SRFBP1	100	75.991	ENSMFAG00000031263	SRFBP1	100	75.991	Macaca_fascicularis
ENSBTAG00000014320	SRFBP1	100	75.991	ENSMMUG00000021009	SRFBP1	100	75.991	Macaca_mulatta
ENSBTAG00000014320	SRFBP1	100	75.991	ENSMNEG00000040870	SRFBP1	100	75.991	Macaca_nemestrina
ENSBTAG00000014320	SRFBP1	88	80.000	ENSMAMG00000004632	-	68	69.444	Mastacembelus_armatus
ENSBTAG00000014320	SRFBP1	99	36.864	ENSMZEG00005000432	-	88	36.419	Maylandia_zebra
ENSBTAG00000014320	SRFBP1	99	67.386	ENSMAUG00000009431	Srfbp1	95	67.386	Mesocricetus_auratus
ENSBTAG00000014320	SRFBP1	100	76.923	ENSMICG00000042923	SRFBP1	100	76.690	Microcebus_murinus
ENSBTAG00000014320	SRFBP1	99	66.822	ENSMOCG00000006206	Srfbp1	97	66.822	Microtus_ochrogaster
ENSBTAG00000014320	SRFBP1	66	40.909	ENSMMOG00000021202	-	97	36.207	Mola_mola
ENSBTAG00000014320	SRFBP1	100	57.373	ENSMODG00000013487	-	99	56.452	Monodelphis_domestica
ENSBTAG00000014320	SRFBP1	100	65.035	MGP_CAROLIEiJ_G0022271	Srfbp1	98	62.387	Mus_caroli
ENSBTAG00000014320	SRFBP1	100	63.889	ENSMUSG00000024528	Srfbp1	98	63.889	Mus_musculus
ENSBTAG00000014320	SRFBP1	100	64.352	MGP_PahariEiJ_G0019004	Srfbp1	98	64.352	Mus_pahari
ENSBTAG00000014320	SRFBP1	100	64.583	MGP_SPRETEiJ_G0023184	Srfbp1	98	64.269	Mus_spretus
ENSBTAG00000014320	SRFBP1	99	81.598	ENSMPUG00000013031	SRFBP1	100	81.114	Mustela_putorius_furo
ENSBTAG00000014320	SRFBP1	99	77.163	ENSMLUG00000009984	SRFBP1	100	76.056	Myotis_lucifugus
ENSBTAG00000014320	SRFBP1	99	67.943	ENSNGAG00000013229	Srfbp1	99	66.197	Nannospalax_galili
ENSBTAG00000014320	SRFBP1	99	39.111	ENSNBRG00000001146	-	99	39.729	Neolamprologus_brichardi
ENSBTAG00000014320	SRFBP1	100	77.570	ENSNLEG00000011949	SRFBP1	100	77.570	Nomascus_leucogenys
ENSBTAG00000014320	SRFBP1	56	62.712	ENSMEUG00000009383	-	55	62.712	Notamacropus_eugenii
ENSBTAG00000014320	SRFBP1	69	73.636	ENSOPRG00000003881	-	77	73.636	Ochotona_princeps
ENSBTAG00000014320	SRFBP1	99	69.712	ENSODEG00000007258	SRFBP1	100	69.471	Octodon_degus
ENSBTAG00000014320	SRFBP1	87	47.120	ENSOANG00000010042	-	98	47.120	Ornithorhynchus_anatinus
ENSBTAG00000014320	SRFBP1	100	73.131	ENSOCUG00000009556	SRFBP1	100	71.495	Oryctolagus_cuniculus
ENSBTAG00000014320	SRFBP1	99	74.101	ENSOGAG00000032423	SRFBP1	100	72.897	Otolemur_garnettii
ENSBTAG00000014320	SRFBP1	100	76.457	ENSPPAG00000035848	SRFBP1	100	75.524	Pan_paniscus
ENSBTAG00000014320	SRFBP1	100	81.308	ENSPPRG00000001695	SRFBP1	100	81.308	Panthera_pardus
ENSBTAG00000014320	SRFBP1	100	80.841	ENSPTIG00000012305	SRFBP1	100	80.841	Panthera_tigris_altaica
ENSBTAG00000014320	SRFBP1	100	76.923	ENSPTRG00000017172	SRFBP1	100	75.991	Pan_troglodytes
ENSBTAG00000014320	SRFBP1	100	77.103	ENSPANG00000003799	SRFBP1	100	77.103	Papio_anubis
ENSBTAG00000014320	SRFBP1	99	47.072	ENSPSIG00000010650	SRFBP1	99	46.171	Pelodiscus_sinensis
ENSBTAG00000014320	SRFBP1	99	38.914	ENSPMGG00000001675	-	99	38.307	Periophthalmus_magnuspinnatus
ENSBTAG00000014320	SRFBP1	100	58.796	ENSPCIG00000028532	SRFBP1	94	58.796	Phascolarctos_cinereus
ENSBTAG00000014320	SRFBP1	99	40.798	ENSPFOG00000005272	-	87	41.020	Poecilia_formosa
ENSBTAG00000014320	SRFBP1	76	65.854	ENSPLAG00000018282	-	63	57.724	Poecilia_latipinna
ENSBTAG00000014320	SRFBP1	76	65.854	ENSPMEG00000020184	-	63	57.724	Poecilia_mexicana
ENSBTAG00000014320	SRFBP1	99	41.553	ENSPREG00000017248	-	98	41.591	Poecilia_reticulata
ENSBTAG00000014320	SRFBP1	100	77.389	ENSPPYG00000015714	SRFBP1	100	76.923	Pongo_abelii
ENSBTAG00000014320	SRFBP1	100	77.622	ENSPCOG00000027331	SRFBP1	100	77.389	Propithecus_coquereli
ENSBTAG00000014320	SRFBP1	57	88.732	ENSPVAG00000017512	-	58	87.662	Pteropus_vampyrus
ENSBTAG00000014320	SRFBP1	74	72.727	ENSPNYG00000010355	-	99	40.045	Pundamilia_nyererei
ENSBTAG00000014320	SRFBP1	70	51.908	ENSPNAG00000029666	srfbp1	65	51.908	Pygocentrus_nattereri
ENSBTAG00000014320	SRFBP1	100	63.972	ENSRNOG00000014808	Srfbp1	98	63.972	Rattus_norvegicus
ENSBTAG00000014320	SRFBP1	99	73.923	ENSRBIG00000031064	SRFBP1	99	73.684	Rhinopithecus_bieti
ENSBTAG00000014320	SRFBP1	100	77.389	ENSRROG00000026932	SRFBP1	100	77.156	Rhinopithecus_roxellana
ENSBTAG00000014320	SRFBP1	100	75.758	ENSSBOG00000015464	-	99	75.524	Saimiri_boliviensis_boliviensis
ENSBTAG00000014320	SRFBP1	100	57.639	ENSSHAG00000016003	SRFBP1	99	57.870	Sarcophilus_harrisii
ENSBTAG00000014320	SRFBP1	99	40.795	ENSSFOG00015001274	srfbp1	99	40.795	Scleropages_formosus
ENSBTAG00000014320	SRFBP1	99	35.490	ENSSMAG00000020630	-	85	35.547	Scophthalmus_maximus
ENSBTAG00000014320	SRFBP1	91	61.905	ENSSDUG00000001828	-	59	62.295	Seriola_dumerili
ENSBTAG00000014320	SRFBP1	100	75.116	ENSSARG00000010669	SRFBP1	100	74.884	Sorex_araneus
ENSBTAG00000014320	SRFBP1	99	43.349	ENSSPUG00000009204	SRFBP1	99	42.890	Sphenodon_punctatus
ENSBTAG00000014320	SRFBP1	78	57.692	ENSSPAG00000010728	-	70	57.692	Stegastes_partitus
ENSBTAG00000014320	SRFBP1	100	83.411	ENSSSCG00000022656	SRFBP1	100	83.411	Sus_scrofa
ENSBTAG00000014320	SRFBP1	99	40.406	ENSTNIG00000009267	-	97	39.509	Tetraodon_nigroviridis
ENSBTAG00000014320	SRFBP1	83	87.727	ENSTTRG00000007726	SRFBP1	83	87.727	Tursiops_truncatus
ENSBTAG00000014320	SRFBP1	99	83.293	ENSUAMG00000016707	SRFBP1	100	83.293	Ursus_americanus
ENSBTAG00000014320	SRFBP1	100	77.218	ENSUMAG00000018340	SRFBP1	100	75.952	Ursus_maritimus
ENSBTAG00000014320	SRFBP1	100	82.944	ENSVPAG00000005714	SRFBP1	100	82.944	Vicugna_pacos
ENSBTAG00000014320	SRFBP1	100	79.953	ENSVVUG00000019178	SRFBP1	100	79.953	Vulpes_vulpes
ENSBTAG00000014320	SRFBP1	99	40.868	ENSXETG00000004681	srfbp1	97	40.868	Xenopus_tropicalis
ENSBTAG00000014320	SRFBP1	99	38.632	ENSXCOG00000003410	-	73	57.143	Xiphophorus_couchianus
ENSBTAG00000014320	SRFBP1	74	67.647	ENSXMAG00000026251	-	63	57.031	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component