EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000014675 (Gene tree)
Gene ID: 514705
Gene Symbol: PTCD2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 32160 bases
Position: chr20:9254757-9286916
Accession: 33490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000019535	MRP-S27	PF10037.9	5.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000019535	-	2338	-	ENSBTAP00000019535	384 (aa)	-	Q3SZ55

Gene Model

Click here to download ENSBTAG00000014675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000014675's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000014675	PTCD2	100	81.510	ENSG00000049883	PTCD2	100	81.313	Homo_sapiens
ENSBTAG00000014675	PTCD2	91	47.701	ENSAPOG00000020682	ptcd2	91	47.701	Acanthochromis_polyacanthus
ENSBTAG00000014675	PTCD2	100	80.469	ENSAMEG00000007194	PTCD2	99	80.469	Ailuropoda_melanoleuca
ENSBTAG00000014675	PTCD2	90	42.407	ENSACIG00000002053	ptcd2	100	42.407	Amphilophus_citrinellus
ENSBTAG00000014675	PTCD2	91	46.839	ENSAOCG00000006616	ptcd2	89	46.839	Amphiprion_ocellaris
ENSBTAG00000014675	PTCD2	91	46.857	ENSAPEG00000022926	ptcd2	89	46.857	Amphiprion_percula
ENSBTAG00000014675	PTCD2	92	58.924	ENSACAG00000009747	PTCD2	90	58.924	Anolis_carolinensis
ENSBTAG00000014675	PTCD2	100	82.552	ENSANAG00000029353	PTCD2	99	82.552	Aotus_nancymaae
ENSBTAG00000014675	PTCD2	94	44.598	ENSACLG00000027742	ptcd2	91	44.598	Astatotilapia_calliptera
ENSBTAG00000014675	PTCD2	85	44.512	ENSAMXG00000029404	ptcd2	88	44.512	Astyanax_mexicanus
ENSBTAG00000014675	PTCD2	100	82.031	ENSCJAG00000016364	PTCD2	99	82.031	Callithrix_jacchus
ENSBTAG00000014675	PTCD2	100	78.906	ENSCAFG00000007982	PTCD2	90	78.906	Canis_familiaris
ENSBTAG00000014675	PTCD2	90	81.792	ENSCAFG00020019147	PTCD2	97	81.792	Canis_lupus_dingo
ENSBTAG00000014675	PTCD2	100	95.052	ENSCHIG00000017118	PTCD2	100	95.052	Capra_hircus
ENSBTAG00000014675	PTCD2	100	74.740	ENSCPOG00000040168	PTCD2	100	74.740	Cavia_porcellus
ENSBTAG00000014675	PTCD2	83	76.875	ENSCCAG00000021996	-	98	76.875	Cebus_capucinus
ENSBTAG00000014675	PTCD2	100	81.250	ENSCCAG00000029389	-	99	81.250	Cebus_capucinus
ENSBTAG00000014675	PTCD2	100	80.208	ENSCATG00000019069	PTCD2	100	80.208	Cercocebus_atys
ENSBTAG00000014675	PTCD2	100	75.781	ENSCLAG00000000072	PTCD2	100	75.781	Chinchilla_lanigera
ENSBTAG00000014675	PTCD2	100	81.510	ENSCSAG00000015623	PTCD2	100	81.510	Chlorocebus_sabaeus
ENSBTAG00000014675	PTCD2	90	59.483	ENSCHOG00000010634	PTCD2	100	59.483	Choloepus_hoffmanni
ENSBTAG00000014675	PTCD2	99	54.308	ENSCPBG00000000216	PTCD2	98	54.308	Chrysemys_picta_bellii
ENSBTAG00000014675	PTCD2	100	80.208	ENSCANG00000035636	PTCD2	99	80.208	Colobus_angolensis_palliatus
ENSBTAG00000014675	PTCD2	100	73.177	ENSCGRG00001015289	Ptcd2	84	73.177	Cricetulus_griseus_chok1gshd
ENSBTAG00000014675	PTCD2	100	73.177	ENSCGRG00000006193	Ptcd2	84	73.177	Cricetulus_griseus_crigri
ENSBTAG00000014675	PTCD2	91	45.402	ENSCVAG00000001285	ptcd2	89	45.402	Cyprinodon_variegatus
ENSBTAG00000014675	PTCD2	98	44.297	ENSDARG00000035391	ptcd2	97	44.297	Danio_rerio
ENSBTAG00000014675	PTCD2	100	75.521	ENSDNOG00000008719	PTCD2	100	75.521	Dasypus_novemcinctus
ENSBTAG00000014675	PTCD2	100	76.804	ENSDORG00000004921	Ptcd2	100	76.804	Dipodomys_ordii
ENSBTAG00000014675	PTCD2	100	67.532	ENSETEG00000016542	PTCD2	99	67.532	Echinops_telfairi
ENSBTAG00000014675	PTCD2	100	82.031	ENSEASG00005018038	PTCD2	100	82.031	Equus_asinus_asinus
ENSBTAG00000014675	PTCD2	100	81.771	ENSECAG00000007022	PTCD2	98	81.771	Equus_caballus
ENSBTAG00000014675	PTCD2	100	76.042	ENSEEUG00000014031	PTCD2	99	76.042	Erinaceus_europaeus
ENSBTAG00000014675	PTCD2	95	48.930	ENSELUG00000003584	ptcd2	97	48.930	Esox_lucius
ENSBTAG00000014675	PTCD2	100	75.521	ENSFCAG00000045432	PTCD2	82	75.521	Felis_catus
ENSBTAG00000014675	PTCD2	85	51.376	ENSFALG00000010299	PTCD2	99	51.376	Ficedula_albicollis
ENSBTAG00000014675	PTCD2	100	75.521	ENSFDAG00000018461	PTCD2	100	75.521	Fukomys_damarensis
ENSBTAG00000014675	PTCD2	91	49.003	ENSGMOG00000003637	ptcd2	91	49.003	Gadus_morhua
ENSBTAG00000014675	PTCD2	92	49.008	ENSGALG00000038260	PTCD2	100	47.532	Gallus_gallus
ENSBTAG00000014675	PTCD2	96	57.682	ENSGAGG00000021952	PTCD2	95	57.682	Gopherus_agassizii
ENSBTAG00000014675	PTCD2	100	81.510	ENSGGOG00000010695	PTCD2	99	81.510	Gorilla_gorilla
ENSBTAG00000014675	PTCD2	94	44.598	ENSHBUG00000009191	ptcd2	91	44.598	Haplochromis_burtoni
ENSBTAG00000014675	PTCD2	100	75.781	ENSHGLG00000001234	PTCD2	100	75.781	Heterocephalus_glaber_female
ENSBTAG00000014675	PTCD2	100	76.042	ENSHGLG00100015419	PTCD2	100	76.042	Heterocephalus_glaber_male
ENSBTAG00000014675	PTCD2	94	46.685	ENSHCOG00000001703	ptcd2	92	46.685	Hippocampus_comes
ENSBTAG00000014675	PTCD2	85	45.732	ENSIPUG00000006080	ptcd2	91	45.845	Ictalurus_punctatus
ENSBTAG00000014675	PTCD2	97	79.625	ENSSTOG00000006596	PTCD2	97	79.625	Ictidomys_tridecemlineatus
ENSBTAG00000014675	PTCD2	100	76.042	ENSJJAG00000024388	Ptcd2	100	76.042	Jaculus_jaculus
ENSBTAG00000014675	PTCD2	91	43.466	ENSKMAG00000009329	ptcd2	91	43.466	Kryptolebias_marmoratus
ENSBTAG00000014675	PTCD2	90	47.110	ENSLBEG00000024871	ptcd2	88	47.110	Labrus_bergylta
ENSBTAG00000014675	PTCD2	97	54.692	ENSLOCG00000011122	ptcd2	94	55.833	Lepisosteus_oculatus
ENSBTAG00000014675	PTCD2	81	80.064	ENSLAFG00000004115	PTCD2	99	80.064	Loxodonta_africana
ENSBTAG00000014675	PTCD2	100	80.208	ENSMFAG00000031516	PTCD2	99	80.208	Macaca_fascicularis
ENSBTAG00000014675	PTCD2	100	79.948	ENSMNEG00000007537	PTCD2	100	79.948	Macaca_nemestrina
ENSBTAG00000014675	PTCD2	100	80.208	ENSMLEG00000031093	PTCD2	99	80.208	Mandrillus_leucophaeus
ENSBTAG00000014675	PTCD2	96	47.011	ENSMAMG00000018529	ptcd2	94	47.011	Mastacembelus_armatus
ENSBTAG00000014675	PTCD2	94	44.598	ENSMZEG00005003625	ptcd2	91	44.598	Maylandia_zebra
ENSBTAG00000014675	PTCD2	91	49.713	ENSMGAG00000005033	PTCD2	100	49.713	Meleagris_gallopavo
ENSBTAG00000014675	PTCD2	100	57.031	ENSMAUG00000020253	Ptcd2	100	57.031	Mesocricetus_auratus
ENSBTAG00000014675	PTCD2	100	79.427	ENSMICG00000004535	PTCD2	99	79.427	Microcebus_murinus
ENSBTAG00000014675	PTCD2	100	73.438	ENSMOCG00000019985	Ptcd2	100	73.438	Microtus_ochrogaster
ENSBTAG00000014675	PTCD2	100	56.250	ENSMODG00000001695	PTCD2	100	56.250	Monodelphis_domestica
ENSBTAG00000014675	PTCD2	94	46.814	ENSMALG00000022372	ptcd2	92	46.814	Monopterus_albus
ENSBTAG00000014675	PTCD2	100	71.354	MGP_CAROLIEiJ_G0018829	Ptcd2	100	71.354	Mus_caroli
ENSBTAG00000014675	PTCD2	100	70.833	ENSMUSG00000021650	Ptcd2	100	70.833	Mus_musculus
ENSBTAG00000014675	PTCD2	100	73.438	MGP_PahariEiJ_G0015904	Ptcd2	100	73.438	Mus_pahari
ENSBTAG00000014675	PTCD2	100	71.354	MGP_SPRETEiJ_G0019711	Ptcd2	100	71.354	Mus_spretus
ENSBTAG00000014675	PTCD2	100	82.552	ENSMPUG00000014401	PTCD2	100	82.552	Mustela_putorius_furo
ENSBTAG00000014675	PTCD2	100	80.990	ENSMLUG00000007374	PTCD2	99	80.990	Myotis_lucifugus
ENSBTAG00000014675	PTCD2	100	74.219	ENSNGAG00000005027	Ptcd2	100	74.219	Nannospalax_galili
ENSBTAG00000014675	PTCD2	94	44.875	ENSNBRG00000008174	ptcd2	92	44.875	Neolamprologus_brichardi
ENSBTAG00000014675	PTCD2	86	45.455	ENSNBRG00000000092	-	100	45.455	Neolamprologus_brichardi
ENSBTAG00000014675	PTCD2	100	80.729	ENSNLEG00000004516	PTCD2	99	80.729	Nomascus_leucogenys
ENSBTAG00000014675	PTCD2	78	53.000	ENSMEUG00000014012	-	82	52.077	Notamacropus_eugenii
ENSBTAG00000014675	PTCD2	98	72.149	ENSOPRG00000007290	PTCD2	97	72.149	Ochotona_princeps
ENSBTAG00000014675	PTCD2	100	77.083	ENSODEG00000016417	PTCD2	100	77.083	Octodon_degus
ENSBTAG00000014675	PTCD2	75	47.751	ENSONIG00000011269	ptcd2	85	47.751	Oreochromis_niloticus
ENSBTAG00000014675	PTCD2	95	79.121	ENSOCUG00000007970	PTCD2	99	77.749	Oryctolagus_cuniculus
ENSBTAG00000014675	PTCD2	90	47.110	ENSORLG00000003851	ptcd2	88	47.110	Oryzias_latipes
ENSBTAG00000014675	PTCD2	90	46.532	ENSORLG00020009823	ptcd2	90	46.532	Oryzias_latipes_hni
ENSBTAG00000014675	PTCD2	91	45.869	ENSORLG00015016777	ptcd2	100	45.869	Oryzias_latipes_hsok
ENSBTAG00000014675	PTCD2	90	45.665	ENSOMEG00000012396	ptcd2	84	45.665	Oryzias_melastigma
ENSBTAG00000014675	PTCD2	100	73.958	ENSOGAG00000008390	PTCD2	99	73.958	Otolemur_garnettii
ENSBTAG00000014675	PTCD2	100	95.052	ENSOARG00000005087	PTCD2	99	95.052	Ovis_aries
ENSBTAG00000014675	PTCD2	100	81.510	ENSPPAG00000028480	PTCD2	99	81.510	Pan_paniscus
ENSBTAG00000014675	PTCD2	100	80.990	ENSPTRG00000016968	PTCD2	99	80.990	Pan_troglodytes
ENSBTAG00000014675	PTCD2	90	82.609	ENSPANG00000006611	PTCD2	89	82.609	Papio_anubis
ENSBTAG00000014675	PTCD2	92	48.596	ENSPKIG00000019896	ptcd2	93	48.596	Paramormyrops_kingsleyae
ENSBTAG00000014675	PTCD2	83	59.306	ENSPSIG00000014559	PTCD2	98	59.306	Pelodiscus_sinensis
ENSBTAG00000014675	PTCD2	100	73.834	ENSPEMG00000000884	Ptcd2	100	73.834	Peromyscus_maniculatus_bairdii
ENSBTAG00000014675	PTCD2	100	59.635	ENSPCIG00000029047	PTCD2	100	59.635	Phascolarctos_cinereus
ENSBTAG00000014675	PTCD2	93	42.897	ENSPLAG00000010456	ptcd2	96	42.895	Poecilia_latipinna
ENSBTAG00000014675	PTCD2	91	44.828	ENSPREG00000021797	ptcd2	88	44.828	Poecilia_reticulata
ENSBTAG00000014675	PTCD2	100	70.052	ENSPPYG00000015543	PTCD2	99	70.052	Pongo_abelii
ENSBTAG00000014675	PTCD2	81	66.129	ENSPCAG00000006806	PTCD2	98	66.129	Procavia_capensis
ENSBTAG00000014675	PTCD2	100	81.510	ENSPVAG00000010935	PTCD2	99	81.510	Pteropus_vampyrus
ENSBTAG00000014675	PTCD2	94	44.598	ENSPNYG00000003122	ptcd2	91	44.598	Pundamilia_nyererei
ENSBTAG00000014675	PTCD2	97	47.074	ENSPNAG00000021490	ptcd2	97	47.340	Pygocentrus_nattereri
ENSBTAG00000014675	PTCD2	100	73.698	ENSRNOG00000028403	Ptcd2	100	73.698	Rattus_norvegicus
ENSBTAG00000014675	PTCD2	100	75.521	ENSRBIG00000032929	PTCD2	99	75.521	Rhinopithecus_bieti
ENSBTAG00000014675	PTCD2	100	80.469	ENSRROG00000000080	PTCD2	100	80.469	Rhinopithecus_roxellana
ENSBTAG00000014675	PTCD2	100	79.688	ENSSBOG00000018911	PTCD2	100	79.688	Saimiri_boliviensis_boliviensis
ENSBTAG00000014675	PTCD2	100	60.938	ENSSHAG00000003833	PTCD2	99	60.938	Sarcophilus_harrisii
ENSBTAG00000014675	PTCD2	97	45.161	ENSSFOG00015015415	ptcd2	96	45.161	Scleropages_formosus
ENSBTAG00000014675	PTCD2	90	44.092	ENSSMAG00000010350	ptcd2	90	44.092	Scophthalmus_maximus
ENSBTAG00000014675	PTCD2	90	48.415	ENSSDUG00000008142	ptcd2	87	48.415	Seriola_dumerili
ENSBTAG00000014675	PTCD2	90	48.703	ENSSLDG00000015284	ptcd2	91	48.703	Seriola_lalandi_dorsalis
ENSBTAG00000014675	PTCD2	81	70.645	ENSSARG00000004983	PTCD2	99	70.645	Sorex_araneus
ENSBTAG00000014675	PTCD2	96	53.639	ENSSPUG00000000176	PTCD2	93	53.639	Sphenodon_punctatus
ENSBTAG00000014675	PTCD2	91	47.414	ENSSPAG00000008591	ptcd2	89	47.414	Stegastes_partitus
ENSBTAG00000014675	PTCD2	100	84.896	ENSSSCG00000016975	PTCD2	90	84.896	Sus_scrofa
ENSBTAG00000014675	PTCD2	90	51.156	ENSTGUG00000005705	PTCD2	99	51.156	Taeniopygia_guttata
ENSBTAG00000014675	PTCD2	100	77.604	ENSTBEG00000016559	PTCD2	99	77.604	Tupaia_belangeri
ENSBTAG00000014675	PTCD2	100	88.021	ENSTTRG00000011851	PTCD2	99	88.021	Tursiops_truncatus
ENSBTAG00000014675	PTCD2	100	80.990	ENSUAMG00000007583	PTCD2	90	80.990	Ursus_americanus
ENSBTAG00000014675	PTCD2	100	80.990	ENSUMAG00000007666	PTCD2	100	80.990	Ursus_maritimus
ENSBTAG00000014675	PTCD2	100	84.896	ENSVPAG00000009597	PTCD2	99	84.896	Vicugna_pacos
ENSBTAG00000014675	PTCD2	97	80.108	ENSVVUG00000007299	-	97	80.108	Vulpes_vulpes
ENSBTAG00000014675	PTCD2	97	50.802	ENSXETG00000031652	PTCD2	97	50.802	Xenopus_tropicalis
ENSBTAG00000014675	PTCD2	93	42.897	ENSXMAG00000005940	ptcd2	87	42.632	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001822	kidney development	-	IEA	Process
GO:0001889	liver development	-	IEA	Process
GO:0005739	mitochondrion	-	ISS	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0007005	mitochondrion organization	-	IEA	Process
GO:0048747	muscle fiber development	-	IEA	Process
GO:0050684	regulation of mRNA processing	-	ISS	Process
GO:0055010	ventricular cardiac muscle tissue morphogenesis	-	IEA	Process