EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSBTAG00000014766 (Gene tree)
Gene ID
615796
Gene Symbol
SRSF1
Alias
-
Full Name
Bos taurus serine and arginine rich splicing factor 1 (SRSF1)%2C mRNA.
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Minus strand
Length
3728 bases
Position
chr19:8806081-8809808
Accession
NM_001076394
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000046374RRM_1PF00076.221.8e-3312
ENSBTAP00000046374RRM_1PF00076.221.8e-3322
ENSBTAP00000059261RRM_1PF00076.221.9e-3312
ENSBTAP00000059261RRM_1PF00076.221.9e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000068855-762-ENSBTAP00000059261253 (aa)-UPI00002010B7
ENSBTAT00000049486-2752-ENSBTAP00000046374248 (aa)-Q0VCY7
Gene Model
Click here to download ENSBTAG00000014766's gene model file
Pathways
Pathway IDPathway NameSource
bta03040SpliceosomeKEGG
bta04657IL-17 signaling pathwayKEGG
bta05168Herpes simplex virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000014766's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSBTAG00000014766SRSF17842.584ENSBTAG00000008527SRSF65741.148
ENSBTAG00000014766SRSF17769.792ENSBTAG00000005584-8269.792
ENSBTAG00000014766SRSF16546.988ENSBTAG00000011596SRSF55945.509
ENSBTAG00000014766SRSF17769.271ENSBTAG00000012792SRSF98269.271
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000014766SRSF1100100.000ENSG00000136450SRSF1100100.000Homo_sapiens
ENSBTAG00000014766SRSF17991.133ENSAPOG00000008542-10086.220Acanthochromis_polyacanthus
ENSBTAG00000014766SRSF17891.710ENSAPOG00000002748-9884.362Acanthochromis_polyacanthus
ENSBTAG00000014766SRSF110097.177ENSAMEG00000002635SRSF110097.177Ailuropoda_melanoleuca
ENSBTAG00000014766SRSF18886.099ENSACIG00000008091srsf1a9878.926Amphilophus_citrinellus
ENSBTAG00000014766SRSF18886.547ENSAOCG00000010671-9885.185Amphiprion_ocellaris
ENSBTAG00000014766SRSF17991.133ENSAOCG00000000337-10086.508Amphiprion_ocellaris
ENSBTAG00000014766SRSF18886.547ENSAPEG00000009915-9885.185Amphiprion_percula
ENSBTAG00000014766SRSF17991.133ENSAPEG00000023352-9986.561Amphiprion_percula
ENSBTAG00000014766SRSF18287.192ENSATEG00000021567-10084.959Anabas_testudineus
ENSBTAG00000014766SRSF17892.228ENSATEG00000022403-9884.898Anabas_testudineus
ENSBTAG00000014766SRSF110098.387ENSACAG00000005542-10098.387Anolis_carolinensis
ENSBTAG00000014766SRSF18173.500ENSANAG00000025417-9976.016Aotus_nancymaae
ENSBTAG00000014766SRSF1100100.000ENSANAG00000020583-100100.000Aotus_nancymaae
ENSBTAG00000014766SRSF15478.065ENSAMXG00000024373-9477.778Astyanax_mexicanus
ENSBTAG00000014766SRSF19491.632ENSAMXG00000035996srsf1a9893.145Astyanax_mexicanus
ENSBTAG00000014766SRSF1100100.000ENSCJAG00000041713-100100.000Callithrix_jacchus
ENSBTAG00000014766SRSF17991.837ENSCJAG00000008111-8891.371Callithrix_jacchus
ENSBTAG00000014766SRSF1100100.000ENSCAFG00000017430SRSF1100100.000Canis_familiaris
ENSBTAG00000014766SRSF1100100.000ENSCAFG00020025632-100100.000Canis_lupus_dingo
ENSBTAG00000014766SRSF1100100.000ENSCHIG00000010787SRSF1100100.000Capra_hircus
ENSBTAG00000014766SRSF1100100.000ENSTSYG00000013899-100100.000Carlito_syrichta
ENSBTAG00000014766SRSF1100100.000ENSCPOG00000032681-100100.000Cavia_porcellus
ENSBTAG00000014766SRSF1100100.000ENSCCAG00000029484-100100.000Cebus_capucinus
ENSBTAG00000014766SRSF1100100.000ENSCATG00000042294-100100.000Cercocebus_atys
ENSBTAG00000014766SRSF1100100.000ENSCLAG00000014707-100100.000Chinchilla_lanigera
ENSBTAG00000014766SRSF110099.209ENSCSAG00000005642-10099.209Chlorocebus_sabaeus
ENSBTAG00000014766SRSF1100100.000ENSCHOG00000001899SRSF1100100.000Choloepus_hoffmanni
ENSBTAG00000014766SRSF110098.814ENSCPBG00000009851-10098.814Chrysemys_picta_bellii
ENSBTAG00000014766SRSF1100100.000ENSCANG00000029726-100100.000Colobus_angolensis_palliatus
ENSBTAG00000014766SRSF1100100.000ENSCGRG00001000670Srsf1100100.000Cricetulus_griseus_chok1gshd
ENSBTAG00000014766SRSF1100100.000ENSCGRG00000005590Srsf1100100.000Cricetulus_griseus_crigri
ENSBTAG00000014766SRSF17983.962ENSCSEG00000009973-10080.303Cynoglossus_semilaevis
ENSBTAG00000014766SRSF17891.327ENSCSEG00000014272-9884.553Cynoglossus_semilaevis
ENSBTAG00000014766SRSF17892.228ENSCVAG00000018617-9885.185Cyprinodon_variegatus
ENSBTAG00000014766SRSF17889.744ENSCVAG00000005458-9886.179Cyprinodon_variegatus
ENSBTAG00000014766SRSF19996.735ENSDARG00000017843srsf1b9996.735Danio_rerio
ENSBTAG00000014766SRSF17889.706ENSDARG00000057691srsf1a9892.095Danio_rerio
ENSBTAG00000014766SRSF1100100.000ENSDNOG00000011737-100100.000Dasypus_novemcinctus
ENSBTAG00000014766SRSF1100100.000ENSDORG00000015082Srsf1100100.000Dipodomys_ordii
ENSBTAG00000014766SRSF17498.913ENSETEG00000005349-6398.913Echinops_telfairi
ENSBTAG00000014766SRSF1100100.000ENSEASG00005002922-100100.000Equus_asinus_asinus
ENSBTAG00000014766SRSF1100100.000ENSECAG00000016654SRSF1100100.000Equus_caballus
ENSBTAG00000014766SRSF174100.000ENSEEUG00000009255-63100.000Erinaceus_europaeus
ENSBTAG00000014766SRSF17893.299ENSELUG00000021646srsf1a9879.839Esox_lucius
ENSBTAG00000014766SRSF1100100.000ENSFCAG00000002250-100100.000Felis_catus
ENSBTAG00000014766SRSF110082.213ENSFALG00000005062-10082.213Ficedula_albicollis
ENSBTAG00000014766SRSF1100100.000ENSFDAG00000010646-100100.000Fukomys_damarensis
ENSBTAG00000014766SRSF18886.547ENSFHEG00000003174srsf1a9885.185Fundulus_heteroclitus
ENSBTAG00000014766SRSF18089.394ENSGMOG00000014787-9982.645Gadus_morhua
ENSBTAG00000014766SRSF110098.790ENSGALG00000005525SRSF110098.790Gallus_gallus
ENSBTAG00000014766SRSF17986.802ENSGACG00000020621srsf1b10074.390Gasterosteus_aculeatus
ENSBTAG00000014766SRSF110098.814ENSGAGG00000022965-10098.814Gopherus_agassizii
ENSBTAG00000014766SRSF1100100.000ENSGGOG00000004386SRSF1100100.000Gorilla_gorilla
ENSBTAG00000014766SRSF18886.099ENSHBUG00000016788srsf1a9884.774Haplochromis_burtoni
ENSBTAG00000014766SRSF187100.000ENSHGLG00000000600-100100.000Heterocephalus_glaber_female
ENSBTAG00000014766SRSF187100.000ENSHGLG00000000669-100100.000Heterocephalus_glaber_female
ENSBTAG00000014766SRSF1100100.000ENSHGLG00100016906-100100.000Heterocephalus_glaber_male
ENSBTAG00000014766SRSF17887.310ENSHCOG00000018918srsf1a9781.928Hippocampus_comes
ENSBTAG00000014766SRSF110095.968ENSIPUG00000008750srsf1b10095.968Ictalurus_punctatus
ENSBTAG00000014766SRSF19491.213ENSIPUG00000017039srsf1a9893.145Ictalurus_punctatus
ENSBTAG00000014766SRSF1100100.000ENSSTOG00000000243-100100.000Ictidomys_tridecemlineatus
ENSBTAG00000014766SRSF15192.126ENSJJAG00000014464-9588.189Jaculus_jaculus
ENSBTAG00000014766SRSF1100100.000ENSJJAG00000000102-100100.000Jaculus_jaculus
ENSBTAG00000014766SRSF17892.228ENSKMAG00000019232srsf1a9883.951Kryptolebias_marmoratus
ENSBTAG00000014766SRSF17984.500ENSLBEG00000015294-9883.133Labrus_bergylta
ENSBTAG00000014766SRSF18885.650ENSLBEG00000020864-9884.362Labrus_bergylta
ENSBTAG00000014766SRSF17894.845ENSLACG00000014160srsf1a9293.878Latimeria_chalumnae
ENSBTAG00000014766SRSF110097.177ENSLOCG00000005994srsf1a10097.177Lepisosteus_oculatus
ENSBTAG00000014766SRSF1100100.000ENSLAFG00000025743SRSF1100100.000Loxodonta_africana
ENSBTAG00000014766SRSF1100100.000ENSMFAG00000040003-100100.000Macaca_fascicularis
ENSBTAG00000014766SRSF1100100.000ENSMMUG00000004725SRSF1100100.000Macaca_mulatta
ENSBTAG00000014766SRSF110097.233ENSMMUG00000003260-10097.233Macaca_mulatta
ENSBTAG00000014766SRSF1100100.000ENSMNEG00000027680-100100.000Macaca_nemestrina
ENSBTAG00000014766SRSF110096.838ENSMNEG00000015983-10096.838Macaca_nemestrina
ENSBTAG00000014766SRSF110094.466ENSMLEG00000015243-10094.466Mandrillus_leucophaeus
ENSBTAG00000014766SRSF1100100.000ENSMLEG00000040509SRSF1100100.000Mandrillus_leucophaeus
ENSBTAG00000014766SRSF17990.355ENSMAMG00000019687-10085.081Mastacembelus_armatus
ENSBTAG00000014766SRSF17994.924ENSMAMG00000019691-10088.211Mastacembelus_armatus
ENSBTAG00000014766SRSF17892.228ENSMAMG00000018454-9885.185Mastacembelus_armatus
ENSBTAG00000014766SRSF1100100.000ENSMAUG00000021845Srsf1100100.000Mesocricetus_auratus
ENSBTAG00000014766SRSF1100100.000ENSMICG00000013639-100100.000Microcebus_murinus
ENSBTAG00000014766SRSF1100100.000ENSMOCG00000001996Srsf1100100.000Microtus_ochrogaster
ENSBTAG00000014766SRSF18885.202ENSMMOG00000014354srsf1a9878.099Mola_mola
ENSBTAG00000014766SRSF17498.919ENSMODG00000014781-6398.919Monodelphis_domestica
ENSBTAG00000014766SRSF17891.710ENSMALG00000017129-7588.601Monopterus_albus
ENSBTAG00000014766SRSF18277.941ENSMALG00000007763-7979.695Monopterus_albus
ENSBTAG00000014766SRSF1100100.000MGP_CAROLIEiJ_G0016943Srsf1100100.000Mus_caroli
ENSBTAG00000014766SRSF1100100.000ENSMUSG00000018379Srsf1100100.000Mus_musculus
ENSBTAG00000014766SRSF1100100.000MGP_PahariEiJ_G0018074Srsf1100100.000Mus_pahari
ENSBTAG00000014766SRSF1100100.000MGP_SPRETEiJ_G0017790Srsf1100100.000Mus_spretus
ENSBTAG00000014766SRSF1100100.000ENSMPUG00000015369SRSF1100100.000Mustela_putorius_furo
ENSBTAG00000014766SRSF1100100.000ENSMLUG00000011040SRSF1100100.000Myotis_lucifugus
ENSBTAG00000014766SRSF18290.640ENSMLUG00000023995-10090.323Myotis_lucifugus
ENSBTAG00000014766SRSF1100100.000ENSNGAG00000011395Srsf1100100.000Nannospalax_galili
ENSBTAG00000014766SRSF110079.839ENSNBRG00000008041srsf1b8082.741Neolamprologus_brichardi
ENSBTAG00000014766SRSF1100100.000ENSNLEG00000008088-100100.000Nomascus_leucogenys
ENSBTAG00000014766SRSF15198.425ENSMEUG00000002783-10098.425Notamacropus_eugenii
ENSBTAG00000014766SRSF174100.000ENSOPRG00000001234-100100.000Ochotona_princeps
ENSBTAG00000014766SRSF110099.597ENSODEG00000011481-10099.597Octodon_degus
ENSBTAG00000014766SRSF19690.717ENSONIG00000004860-8190.863Oreochromis_niloticus
ENSBTAG00000014766SRSF17891.710ENSONIG00000013160-9884.774Oreochromis_niloticus
ENSBTAG00000014766SRSF110070.238ENSOCUG00000010894-7771.795Oryctolagus_cuniculus
ENSBTAG00000014766SRSF17892.228ENSORLG00000004580srsf1a9885.185Oryzias_latipes
ENSBTAG00000014766SRSF18886.547ENSORLG00020009456srsf1a9885.185Oryzias_latipes_hni
ENSBTAG00000014766SRSF18886.547ENSORLG00015014384srsf1a9884.774Oryzias_latipes_hsok
ENSBTAG00000014766SRSF17190.341ENSOMEG00000004106srsf1a9282.743Oryzias_melastigma
ENSBTAG00000014766SRSF1100100.000ENSOGAG00000025950-100100.000Otolemur_garnettii
ENSBTAG00000014766SRSF110095.161ENSOARG00000008323SRSF110095.161Ovis_aries
ENSBTAG00000014766SRSF1100100.000ENSPPAG00000043403-100100.000Pan_paniscus
ENSBTAG00000014766SRSF1100100.000ENSPPRG00000004238-100100.000Panthera_pardus
ENSBTAG00000014766SRSF1100100.000ENSPTRG00000049077SRSF1100100.000Pan_troglodytes
ENSBTAG00000014766SRSF110077.075ENSPANG00000030275-10076.680Papio_anubis
ENSBTAG00000014766SRSF1100100.000ENSPANG00000022305-100100.000Papio_anubis
ENSBTAG00000014766SRSF19995.102ENSPKIG00000007204srsf1a9995.102Paramormyrops_kingsleyae
ENSBTAG00000014766SRSF110095.968ENSPKIG00000012857srsf1b10095.968Paramormyrops_kingsleyae
ENSBTAG00000014766SRSF17990.955ENSPSIG00000009000-10092.000Pelodiscus_sinensis
ENSBTAG00000014766SRSF18883.857ENSPMGG00000013112-9985.654Periophthalmus_magnuspinnatus
ENSBTAG00000014766SRSF19684.937ENSPMGG00000005467-9985.470Periophthalmus_magnuspinnatus
ENSBTAG00000014766SRSF1100100.000ENSPEMG00000021416Srsf1100100.000Peromyscus_maniculatus_bairdii
ENSBTAG00000014766SRSF110099.197ENSPCIG00000006076-10099.197Phascolarctos_cinereus
ENSBTAG00000014766SRSF17989.899ENSPFOG00000018325-8685.714Poecilia_formosa
ENSBTAG00000014766SRSF17989.899ENSPLAG00000008416srsf1b9885.714Poecilia_latipinna
ENSBTAG00000014766SRSF15089.431ENSPMEG00000020607-9887.805Poecilia_mexicana
ENSBTAG00000014766SRSF17989.899ENSPMEG00000002388-9885.714Poecilia_mexicana
ENSBTAG00000014766SRSF15089.431ENSPMEG00000014312-9887.805Poecilia_mexicana
ENSBTAG00000014766SRSF17892.228ENSPREG00000009667srsf1a9885.185Poecilia_reticulata
ENSBTAG00000014766SRSF1100100.000ENSPPYG00000008240SRSF1100100.000Pongo_abelii
ENSBTAG00000014766SRSF1100100.000ENSPCAG00000005199SRSF1100100.000Procavia_capensis
ENSBTAG00000014766SRSF18076.733ENSPCOG00000025736-9576.531Propithecus_coquereli
ENSBTAG00000014766SRSF1100100.000ENSPCOG00000023654-100100.000Propithecus_coquereli
ENSBTAG00000014766SRSF175100.000ENSPVAG00000000519-75100.000Pteropus_vampyrus
ENSBTAG00000014766SRSF19493.162ENSPNAG00000022241srsf1a9890.947Pygocentrus_nattereri
ENSBTAG00000014766SRSF110094.355ENSPNAG00000014601srsf1b10094.355Pygocentrus_nattereri
ENSBTAG00000014766SRSF1100100.000ENSRNOG00000050323Srsf1100100.000Rattus_norvegicus
ENSBTAG00000014766SRSF1100100.000ENSRBIG00000034445-100100.000Rhinopithecus_bieti
ENSBTAG00000014766SRSF1100100.000ENSRROG00000041506-100100.000Rhinopithecus_roxellana
ENSBTAG00000014766SRSF1100100.000ENSSBOG00000025377-100100.000Saimiri_boliviensis_boliviensis
ENSBTAG00000014766SRSF110099.197ENSSHAG00000002552-10099.197Sarcophilus_harrisii
ENSBTAG00000014766SRSF19996.356ENSSFOG00015004800srsf1a9996.356Scleropages_formosus
ENSBTAG00000014766SRSF17890.674ENSSMAG00000007018-9883.128Scophthalmus_maximus
ENSBTAG00000014766SRSF19487.083ENSSMAG00000009719-10086.275Scophthalmus_maximus
ENSBTAG00000014766SRSF110076.494ENSSDUG00000003929-9977.510Seriola_dumerili
ENSBTAG00000014766SRSF18885.650ENSSDUG00000011303-9884.362Seriola_dumerili
ENSBTAG00000014766SRSF19576.695ENSSLDG00000016895-9976.113Seriola_lalandi_dorsalis
ENSBTAG00000014766SRSF17891.192ENSSLDG00000010543-9884.362Seriola_lalandi_dorsalis
ENSBTAG00000014766SRSF17983.838ENSSLDG00000016868-9982.661Seriola_lalandi_dorsalis
ENSBTAG00000014766SRSF174100.000ENSSARG00000010949-63100.000Sorex_araneus
ENSBTAG00000014766SRSF110098.814ENSSPUG00000000804-10098.814Sphenodon_punctatus
ENSBTAG00000014766SRSF17988.038ENSSPAG00000014152-9984.556Stegastes_partitus
ENSBTAG00000014766SRSF17892.746ENSSPAG00000022562-9885.597Stegastes_partitus
ENSBTAG00000014766SRSF1100100.000ENSSSCG00000017626-100100.000Sus_scrofa
ENSBTAG00000014766SRSF17498.370ENSTGUG00000008416-10098.370Taeniopygia_guttata
ENSBTAG00000014766SRSF17891.192ENSTRUG00000003691srsf1a9884.362Takifugu_rubripes
ENSBTAG00000014766SRSF17891.192ENSTNIG00000016223srsf1a9884.362Tetraodon_nigroviridis
ENSBTAG00000014766SRSF17498.370ENSTBEG00000015378-6398.370Tupaia_belangeri
ENSBTAG00000014766SRSF174100.000ENSTTRG00000007310SRSF1100100.000Tursiops_truncatus
ENSBTAG00000014766SRSF1100100.000ENSUAMG00000009858SRSF1100100.000Ursus_americanus
ENSBTAG00000014766SRSF1100100.000ENSUMAG00000000455-100100.000Ursus_maritimus
ENSBTAG00000014766SRSF110099.597ENSVPAG00000010094SRSF110099.597Vicugna_pacos
ENSBTAG00000014766SRSF1100100.000ENSVVUG00000011882-100100.000Vulpes_vulpes
ENSBTAG00000014766SRSF110095.968ENSXETG00000008954srsf110091.386Xenopus_tropicalis
ENSBTAG00000014766SRSF17892.228ENSXMAG00000011766srsf1a9885.185Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000395mRNA 5'-splice site recognition-ISSProcess
GO:0003723RNA binding-ISSFunction
GO:0005654nucleoplasm-ISSComponent
GO:0005681spliceosomal complex-IEAComponent
GO:0005737cytoplasm-IEAComponent
GO:0051028mRNA transport-IEAProcess

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