EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000015166 (Gene tree)
Gene ID: 615807
Gene Symbol: PNLDC1
Alias: -
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 25706 bases
Position: chr9:96065261-96090966
Accession: 33082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000020180	CAF1	PF04857.20	4.8e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000020180	-	6184	XM_002690375	ENSBTAP00000020180	529 (aa)	XP_002690421	F1MX01

Gene Model

Click here to download ENSBTAG00000015166's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000015166's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000015166	PNLDC1	99	86.042	ENSG00000146453	PNLDC1	99	85.851	Homo_sapiens
ENSBTAG00000015166	PNLDC1	96	90.354	ENSAMEG00000015371	PNLDC1	96	90.354	Ailuropoda_melanoleuca
ENSBTAG00000015166	PNLDC1	97	58.077	ENSAPLG00000007014	PNLDC1	97	58.627	Anas_platyrhynchos
ENSBTAG00000015166	PNLDC1	96	58.974	ENSACAG00000013667	PNLDC1	95	58.974	Anolis_carolinensis
ENSBTAG00000015166	PNLDC1	96	86.561	ENSANAG00000034713	PNLDC1	95	87.885	Aotus_nancymaae
ENSBTAG00000015166	PNLDC1	96	86.561	ENSCJAG00000011865	PNLDC1	99	86.706	Callithrix_jacchus
ENSBTAG00000015166	PNLDC1	96	92.292	ENSCAFG00000000740	PNLDC1	95	92.292	Canis_familiaris
ENSBTAG00000015166	PNLDC1	96	89.921	ENSCAFG00020017742	PNLDC1	95	89.921	Canis_lupus_dingo
ENSBTAG00000015166	PNLDC1	96	95.455	ENSCHIG00000003141	PNLDC1	99	91.871	Capra_hircus
ENSBTAG00000015166	PNLDC1	96	86.166	ENSTSYG00000005606	PNLDC1	95	86.166	Carlito_syrichta
ENSBTAG00000015166	PNLDC1	87	67.756	ENSCAPG00000011893	PNLDC1	88	67.756	Cavia_aperea
ENSBTAG00000015166	PNLDC1	96	81.102	ENSCPOG00000019565	PNLDC1	95	81.349	Cavia_porcellus
ENSBTAG00000015166	PNLDC1	96	86.957	ENSCCAG00000026232	PNLDC1	95	86.957	Cebus_capucinus
ENSBTAG00000015166	PNLDC1	96	86.561	ENSCATG00000033196	PNLDC1	95	86.561	Cercocebus_atys
ENSBTAG00000015166	PNLDC1	95	85.288	ENSCLAG00000003228	PNLDC1	95	85.288	Chinchilla_lanigera
ENSBTAG00000015166	PNLDC1	99	85.905	ENSCSAG00000012478	PNLDC1	99	85.714	Chlorocebus_sabaeus
ENSBTAG00000015166	PNLDC1	92	67.967	ENSCPBG00000004050	PNLDC1	95	67.967	Chrysemys_picta_bellii
ENSBTAG00000015166	PNLDC1	97	86.693	ENSCANG00000043076	PNLDC1	98	86.785	Colobus_angolensis_palliatus
ENSBTAG00000015166	PNLDC1	95	82.903	ENSCGRG00001007470	-	95	82.903	Cricetulus_griseus_chok1gshd
ENSBTAG00000015166	PNLDC1	95	65.805	ENSCGRG00001011981	-	93	65.805	Cricetulus_griseus_chok1gshd
ENSBTAG00000015166	PNLDC1	95	68.526	ENSCGRG00000003103	-	93	68.526	Cricetulus_griseus_crigri
ENSBTAG00000015166	PNLDC1	95	82.903	ENSCGRG00000010221	-	95	82.903	Cricetulus_griseus_crigri
ENSBTAG00000015166	PNLDC1	95	87.723	ENSDNOG00000013709	PNLDC1	95	87.723	Dasypus_novemcinctus
ENSBTAG00000015166	PNLDC1	96	79.568	ENSDORG00000011517	Pnldc1	92	88.235	Dipodomys_ordii
ENSBTAG00000015166	PNLDC1	92	77.710	ENSETEG00000007587	PNLDC1	98	77.823	Echinops_telfairi
ENSBTAG00000015166	PNLDC1	96	80.732	ENSEASG00005019029	PNLDC1	95	80.732	Equus_asinus_asinus
ENSBTAG00000015166	PNLDC1	96	91.107	ENSECAG00000012898	PNLDC1	95	91.107	Equus_caballus
ENSBTAG00000015166	PNLDC1	68	81.250	ENSEEUG00000005717	-	86	81.250	Erinaceus_europaeus
ENSBTAG00000015166	PNLDC1	95	92.445	ENSFCAG00000002848	PNLDC1	95	92.445	Felis_catus
ENSBTAG00000015166	PNLDC1	95	57.030	ENSFALG00000012081	PNLDC1	99	57.030	Ficedula_albicollis
ENSBTAG00000015166	PNLDC1	95	85.149	ENSFDAG00000021334	PNLDC1	95	85.149	Fukomys_damarensis
ENSBTAG00000015166	PNLDC1	74	61.111	ENSGALG00000011624	PNLDC1	77	61.111	Gallus_gallus
ENSBTAG00000015166	PNLDC1	95	67.525	ENSGAGG00000015276	PNLDC1	100	68.595	Gopherus_agassizii
ENSBTAG00000015166	PNLDC1	96	86.957	ENSGGOG00000014077	PNLDC1	95	86.957	Gorilla_gorilla
ENSBTAG00000015166	PNLDC1	95	87.078	ENSHGLG00000006889	PNLDC1	95	87.078	Heterocephalus_glaber_female
ENSBTAG00000015166	PNLDC1	95	87.078	ENSHGLG00100018275	PNLDC1	95	87.078	Heterocephalus_glaber_male
ENSBTAG00000015166	PNLDC1	95	89.662	ENSSTOG00000005595	PNLDC1	95	89.662	Ictidomys_tridecemlineatus
ENSBTAG00000015166	PNLDC1	95	79.762	ENSJJAG00000009937	Pnldc1	95	79.762	Jaculus_jaculus
ENSBTAG00000015166	PNLDC1	55	86.942	ENSLAFG00000030189	PNLDC1	85	86.942	Loxodonta_africana
ENSBTAG00000015166	PNLDC1	96	87.549	ENSMFAG00000041296	PNLDC1	95	87.549	Macaca_fascicularis
ENSBTAG00000015166	PNLDC1	97	86.705	ENSMMUG00000004181	PNLDC1	98	86.602	Macaca_mulatta
ENSBTAG00000015166	PNLDC1	96	87.549	ENSMNEG00000034271	PNLDC1	95	87.549	Macaca_nemestrina
ENSBTAG00000015166	PNLDC1	96	83.597	ENSMLEG00000044059	PNLDC1	95	83.597	Mandrillus_leucophaeus
ENSBTAG00000015166	PNLDC1	98	58.046	ENSMGAG00000012470	PNLDC1	97	58.777	Meleagris_gallopavo
ENSBTAG00000015166	PNLDC1	95	67.061	ENSMAUG00000012298	Pnldc1	95	67.061	Mesocricetus_auratus
ENSBTAG00000015166	PNLDC1	96	88.340	ENSMICG00000008021	PNLDC1	95	88.340	Microcebus_murinus
ENSBTAG00000015166	PNLDC1	95	86.337	ENSMOCG00000014287	Pnldc1	95	86.337	Microtus_ochrogaster
ENSBTAG00000015166	PNLDC1	95	77.778	ENSMODG00000007420	PNLDC1	94	77.778	Monodelphis_domestica
ENSBTAG00000015166	PNLDC1	95	86.879	MGP_CAROLIEiJ_G0021045	Pnldc1	95	86.879	Mus_caroli
ENSBTAG00000015166	PNLDC1	95	86.879	ENSMUSG00000073460	Pnldc1	95	86.879	Mus_musculus
ENSBTAG00000015166	PNLDC1	95	87.103	MGP_PahariEiJ_G0023361	Pnldc1	95	87.103	Mus_pahari
ENSBTAG00000015166	PNLDC1	95	86.653	MGP_SPRETEiJ_G0021975	Pnldc1	95	86.653	Mus_spretus
ENSBTAG00000015166	PNLDC1	96	90.711	ENSMPUG00000004920	PNLDC1	95	90.711	Mustela_putorius_furo
ENSBTAG00000015166	PNLDC1	95	87.723	ENSMLUG00000000747	PNLDC1	95	87.723	Myotis_lucifugus
ENSBTAG00000015166	PNLDC1	95	87.078	ENSNGAG00000017714	Pnldc1	95	87.078	Nannospalax_galili
ENSBTAG00000015166	PNLDC1	97	86.888	ENSNLEG00000011282	PNLDC1	98	86.785	Nomascus_leucogenys
ENSBTAG00000015166	PNLDC1	54	68.750	ENSMEUG00000014042	-	100	68.750	Notamacropus_eugenii
ENSBTAG00000015166	PNLDC1	60	64.062	ENSMEUG00000011926	-	64	64.062	Notamacropus_eugenii
ENSBTAG00000015166	PNLDC1	71	82.574	ENSOPRG00000003813	PNLDC1	70	82.574	Ochotona_princeps
ENSBTAG00000015166	PNLDC1	95	84.692	ENSODEG00000008047	PNLDC1	95	84.692	Octodon_degus
ENSBTAG00000015166	PNLDC1	94	58.000	ENSOANG00000012199	PNLDC1	94	58.964	Ornithorhynchus_anatinus
ENSBTAG00000015166	PNLDC1	95	86.255	ENSOCUG00000013867	PNLDC1	95	86.255	Oryctolagus_cuniculus
ENSBTAG00000015166	PNLDC1	95	87.674	ENSOGAG00000007331	PNLDC1	95	87.674	Otolemur_garnettii
ENSBTAG00000015166	PNLDC1	96	95.455	ENSOARG00000004585	PNLDC1	95	95.455	Ovis_aries
ENSBTAG00000015166	PNLDC1	96	86.561	ENSPPAG00000026651	PNLDC1	95	86.561	Pan_paniscus
ENSBTAG00000015166	PNLDC1	95	92.048	ENSPPRG00000012854	PNLDC1	95	92.048	Panthera_pardus
ENSBTAG00000015166	PNLDC1	95	89.621	ENSPTIG00000011501	PNLDC1	94	89.621	Panthera_tigris_altaica
ENSBTAG00000015166	PNLDC1	99	85.468	ENSPTRG00000018762	PNLDC1	99	85.277	Pan_troglodytes
ENSBTAG00000015166	PNLDC1	96	87.549	ENSPANG00000022009	PNLDC1	95	87.549	Papio_anubis
ENSBTAG00000015166	PNLDC1	95	87.078	ENSPEMG00000016301	Pnldc1	95	87.078	Peromyscus_maniculatus_bairdii
ENSBTAG00000015166	PNLDC1	83	78.815	ENSPCIG00000023412	PNLDC1	100	78.815	Phascolarctos_cinereus
ENSBTAG00000015166	PNLDC1	96	80.671	ENSPPYG00000017148	PNLDC1	95	80.671	Pongo_abelii
ENSBTAG00000015166	PNLDC1	95	75.944	ENSPCAG00000014169	PNLDC1	95	75.944	Procavia_capensis
ENSBTAG00000015166	PNLDC1	96	87.352	ENSPCOG00000025722	PNLDC1	95	87.352	Propithecus_coquereli
ENSBTAG00000015166	PNLDC1	68	96.122	ENSPVAG00000005325	PNLDC1	68	96.122	Pteropus_vampyrus
ENSBTAG00000015166	PNLDC1	95	86.680	ENSRNOG00000023140	Pnldc1	99	85.535	Rattus_norvegicus
ENSBTAG00000015166	PNLDC1	96	87.154	ENSRBIG00000033806	PNLDC1	95	87.154	Rhinopithecus_bieti
ENSBTAG00000015166	PNLDC1	97	87.280	ENSRROG00000043919	PNLDC1	98	87.377	Rhinopithecus_roxellana
ENSBTAG00000015166	PNLDC1	96	86.957	ENSSBOG00000019135	PNLDC1	95	86.957	Saimiri_boliviensis_boliviensis
ENSBTAG00000015166	PNLDC1	96	77.075	ENSSHAG00000015192	PNLDC1	97	77.075	Sarcophilus_harrisii
ENSBTAG00000015166	PNLDC1	54	68.182	ENSSPUG00000004627	PNLDC1	99	67.857	Sphenodon_punctatus
ENSBTAG00000015166	PNLDC1	96	90.551	ENSSSCG00000004046	PNLDC1	98	90.675	Sus_scrofa
ENSBTAG00000015166	PNLDC1	92	58.111	ENSTGUG00000011418	PNLDC1	99	58.111	Taeniopygia_guttata
ENSBTAG00000015166	PNLDC1	98	77.369	ENSTBEG00000009131	PNLDC1	99	77.176	Tupaia_belangeri
ENSBTAG00000015166	PNLDC1	68	85.873	ENSTTRG00000010409	PNLDC1	68	85.635	Tursiops_truncatus
ENSBTAG00000015166	PNLDC1	96	76.209	ENSUAMG00000015783	PNLDC1	95	76.209	Ursus_americanus
ENSBTAG00000015166	PNLDC1	95	82.583	ENSUMAG00000011903	PNLDC1	100	82.583	Ursus_maritimus
ENSBTAG00000015166	PNLDC1	92	93.634	ENSVVUG00000006586	PNLDC1	99	92.593	Vulpes_vulpes