EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000015473 (Gene tree)
Gene ID: 286839
Gene Symbol: RPS27A
Alias: -
Full Name: ribosomal protein S27a
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 2299 bases
Position: chr11:37970354-37972652
Accession: 34135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000033015	Ribosomal_S27	PF01599.19	8.5e-28	1	1
ENSBTAP00000061054	Ribosomal_S27	PF01599.19	1.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000075075	-	634	-	ENSBTAP00000061054	194 (aa)	-	-
ENSBTAT00000033091	-	625	-	ENSBTAP00000033015	156 (aa)	XP_005212615	P62992

Gene Model

Click here to download ENSBTAG00000015473's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000015473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000015473	RPS27A	90	87.943	ENSBTAG00000055144	-	99	87.943

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000015473	RPS27A	63	61.386	ENSAMEG00000004505	-	96	60.396	Ailuropoda_melanoleuca
ENSBTAG00000015473	RPS27A	78	100.000	ENSCAPG00000014837	-	100	100.000	Cavia_aperea
ENSBTAG00000015473	RPS27A	94	89.726	ENSCATG00000040456	-	99	89.726	Cercocebus_atys
ENSBTAG00000015473	RPS27A	100	99.359	ENSCPBG00000020897	-	100	99.359	Chrysemys_picta_bellii
ENSBTAG00000015473	RPS27A	60	100.000	ENSCANG00000033266	-	100	100.000	Colobus_angolensis_palliatus
ENSBTAG00000015473	RPS27A	94	90.476	ENSMFAG00000004349	-	99	90.476	Macaca_fascicularis
ENSBTAG00000015473	RPS27A	100	85.256	ENSMMUG00000004807	-	100	85.256	Macaca_mulatta
ENSBTAG00000015473	RPS27A	87	86.029	ENSMOCG00000012967	-	99	74.194	Microtus_ochrogaster
ENSBTAG00000015473	RPS27A	93	91.724	ENSRNOG00000032132	AABR07037998.1	94	91.724	Rattus_norvegicus
ENSBTAG00000015473	RPS27A	96	68.667	ENSSARG00000004533	-	100	68.667	Sorex_araneus
ENSBTAG00000015473	RPS27A	99	50.867	ENSSSCG00000037861	-	99	49.133	Sus_scrofa
ENSBTAG00000015473	RPS27A	100	100.000	ENSUMAG00000016807	-	100	100.000	Ursus_maritimus
ENSBTAG00000015473	RPS27A	100	91.667	ENSXETG00000004519	rps27a	100	91.667	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0006412	translation	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function