EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000015563 (Gene tree)
Gene ID: 538860
Gene Symbol: PDE12
Alias: -
Full Name: Bos taurus phosphodiesterase 12 (PDE12)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 3710 bases
Position: chr22:43636012-43639721
Accession: NM_001076133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000020675	Exo_endo_phos	PF03372.23	1.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000020675	-	2185	-	ENSBTAP00000020675	609 (aa)	-	Q08DF7

Gene Model

Click here to download ENSBTAG00000015563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000015563's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000015563	PDE12	100	91.626	ENSG00000174840	PDE12	100	91.626	Homo_sapiens
ENSBTAG00000015563	PDE12	98	57.002	ENSAPOG00000018806	pde12	98	56.837	Acanthochromis_polyacanthus
ENSBTAG00000015563	PDE12	100	91.954	ENSAMEG00000011802	PDE12	100	92.348	Ailuropoda_melanoleuca
ENSBTAG00000015563	PDE12	98	59.068	ENSACIG00000014918	pde12	98	58.569	Amphilophus_citrinellus
ENSBTAG00000015563	PDE12	98	57.596	ENSAOCG00000016376	pde12	98	57.429	Amphiprion_ocellaris
ENSBTAG00000015563	PDE12	94	58.722	ENSAPEG00000000756	pde12	94	58.549	Amphiprion_percula
ENSBTAG00000015563	PDE12	97	57.770	ENSATEG00000003072	pde12	97	58.131	Anabas_testudineus
ENSBTAG00000015563	PDE12	100	62.136	ENSACAG00000003067	PDE12	100	63.209	Anolis_carolinensis
ENSBTAG00000015563	PDE12	100	90.476	ENSANAG00000011815	PDE12	100	91.133	Aotus_nancymaae
ENSBTAG00000015563	PDE12	96	57.966	ENSACLG00000010127	pde12	96	58.793	Astatotilapia_calliptera
ENSBTAG00000015563	PDE12	94	59.487	ENSAMXG00000020765	pde12	95	59.145	Astyanax_mexicanus
ENSBTAG00000015563	PDE12	52	30.149	WBGene00011268	pde-12	52	30.149	Caenorhabditis_elegans
ENSBTAG00000015563	PDE12	100	90.640	ENSCJAG00000019905	PDE12	100	90.640	Callithrix_jacchus
ENSBTAG00000015563	PDE12	100	91.396	ENSCAFG00000007792	PDE12	100	92.532	Canis_familiaris
ENSBTAG00000015563	PDE12	100	91.558	ENSCAFG00020006692	PDE12	100	92.695	Canis_lupus_dingo
ENSBTAG00000015563	PDE12	100	98.691	ENSCHIG00000014202	PDE12	100	98.691	Capra_hircus
ENSBTAG00000015563	PDE12	100	91.790	ENSTSYG00000025750	PDE12	100	91.790	Carlito_syrichta
ENSBTAG00000015563	PDE12	100	88.013	ENSCPOG00000001620	PDE12	100	88.013	Cavia_porcellus
ENSBTAG00000015563	PDE12	100	78.325	ENSCCAG00000031290	PDE12	100	78.325	Cebus_capucinus
ENSBTAG00000015563	PDE12	100	91.297	ENSCATG00000044539	PDE12	100	91.297	Cercocebus_atys
ENSBTAG00000015563	PDE12	100	86.535	ENSCLAG00000004864	PDE12	100	86.535	Chinchilla_lanigera
ENSBTAG00000015563	PDE12	100	90.476	ENSCSAG00000012275	PDE12	100	91.133	Chlorocebus_sabaeus
ENSBTAG00000015563	PDE12	89	94.795	ENSCHOG00000002188	-	89	94.795	Choloepus_hoffmanni
ENSBTAG00000015563	PDE12	68	92.978	ENSCHOG00000012173	-	100	92.736	Choloepus_hoffmanni
ENSBTAG00000015563	PDE12	96	73.559	ENSCPBG00000012353	PDE12	92	74.271	Chrysemys_picta_bellii
ENSBTAG00000015563	PDE12	93	35.972	ENSCING00000006903	-	99	39.669	Ciona_intestinalis
ENSBTAG00000015563	PDE12	100	91.297	ENSCANG00000038723	PDE12	100	91.297	Colobus_angolensis_palliatus
ENSBTAG00000015563	PDE12	100	89.655	ENSCGRG00001021836	Pde12	100	89.655	Cricetulus_griseus_chok1gshd
ENSBTAG00000015563	PDE12	100	88.506	ENSCGRG00000012319	Pde12	100	88.998	Cricetulus_griseus_crigri
ENSBTAG00000015563	PDE12	94	58.003	ENSCSEG00000018538	pde12	99	57.831	Cynoglossus_semilaevis
ENSBTAG00000015563	PDE12	95	49.225	ENSCVAG00000003624	pde12	94	49.741	Cyprinodon_variegatus
ENSBTAG00000015563	PDE12	94	57.192	ENSDARG00000030964	pde12	93	57.192	Danio_rerio
ENSBTAG00000015563	PDE12	100	88.006	ENSDNOG00000048413	PDE12	100	87.520	Dasypus_novemcinctus
ENSBTAG00000015563	PDE12	100	90.969	ENSDORG00000004313	Pde12	100	90.969	Dipodomys_ordii
ENSBTAG00000015563	PDE12	94	33.221	FBgn0051759	CG31759	99	33.221	Drosophila_melanogaster
ENSBTAG00000015563	PDE12	64	50.000	ENSEBUG00000004803	pde12	71	50.000	Eptatretus_burgeri
ENSBTAG00000015563	PDE12	100	94.417	ENSEASG00005000644	PDE12	100	94.417	Equus_asinus_asinus
ENSBTAG00000015563	PDE12	100	94.417	ENSECAG00000005326	PDE12	100	94.417	Equus_caballus
ENSBTAG00000015563	PDE12	64	94.220	ENSEEUG00000010406	-	62	94.220	Erinaceus_europaeus
ENSBTAG00000015563	PDE12	94	60.659	ENSELUG00000014391	pde12	92	61.352	Esox_lucius
ENSBTAG00000015563	PDE12	100	92.447	ENSFCAG00000031696	PDE12	100	92.447	Felis_catus
ENSBTAG00000015563	PDE12	79	74.948	ENSFALG00000008401	PDE12	99	74.948	Ficedula_albicollis
ENSBTAG00000015563	PDE12	100	90.148	ENSFDAG00000021278	PDE12	100	90.148	Fukomys_damarensis
ENSBTAG00000015563	PDE12	94	55.672	ENSFHEG00000018967	pde12	90	56.370	Fundulus_heteroclitus
ENSBTAG00000015563	PDE12	94	55.536	ENSGMOG00000018041	pde12	98	55.536	Gadus_morhua
ENSBTAG00000015563	PDE12	98	68.264	ENSGALG00000052355	PDE12	99	67.928	Gallus_gallus
ENSBTAG00000015563	PDE12	96	56.250	ENSGAFG00000002045	pde12	96	55.763	Gambusia_affinis
ENSBTAG00000015563	PDE12	99	56.393	ENSGACG00000003914	pde12	99	56.770	Gasterosteus_aculeatus
ENSBTAG00000015563	PDE12	95	73.973	ENSGAGG00000010266	PDE12	92	74.355	Gopherus_agassizii
ENSBTAG00000015563	PDE12	100	91.626	ENSGGOG00000003312	PDE12	100	91.626	Gorilla_gorilla
ENSBTAG00000015563	PDE12	96	58.376	ENSHBUG00000023370	pde12	96	58.376	Haplochromis_burtoni
ENSBTAG00000015563	PDE12	100	89.491	ENSHGLG00000005661	PDE12	100	89.491	Heterocephalus_glaber_female
ENSBTAG00000015563	PDE12	100	89.655	ENSHGLG00100001136	PDE12	100	89.655	Heterocephalus_glaber_male
ENSBTAG00000015563	PDE12	95	56.803	ENSHCOG00000013749	pde12	95	57.313	Hippocampus_comes
ENSBTAG00000015563	PDE12	94	61.005	ENSIPUG00000007123	Pde12	94	60.659	Ictalurus_punctatus
ENSBTAG00000015563	PDE12	100	91.626	ENSSTOG00000007861	PDE12	100	91.626	Ictidomys_tridecemlineatus
ENSBTAG00000015563	PDE12	100	87.196	ENSJJAG00000006038	Pde12	100	88.331	Jaculus_jaculus
ENSBTAG00000015563	PDE12	100	58.117	ENSKMAG00000018523	pde12	99	57.980	Kryptolebias_marmoratus
ENSBTAG00000015563	PDE12	94	58.520	ENSLBEG00000009762	PDE12	94	59.036	Labrus_bergylta
ENSBTAG00000015563	PDE12	94	56.261	ENSLBEG00000026775	pde12	94	56.627	Labrus_bergylta
ENSBTAG00000015563	PDE12	95	67.414	ENSLACG00000015492	PDE12	95	67.753	Latimeria_chalumnae
ENSBTAG00000015563	PDE12	95	64.767	ENSLOCG00000013277	pde12	93	64.594	Lepisosteus_oculatus
ENSBTAG00000015563	PDE12	92	91.474	ENSLAFG00000002821	PDE12	100	91.829	Loxodonta_africana
ENSBTAG00000015563	PDE12	100	91.461	ENSMFAG00000030966	PDE12	100	91.461	Macaca_fascicularis
ENSBTAG00000015563	PDE12	100	91.461	ENSMMUG00000004052	PDE12	100	91.461	Macaca_mulatta
ENSBTAG00000015563	PDE12	100	91.461	ENSMNEG00000030068	PDE12	100	91.461	Macaca_nemestrina
ENSBTAG00000015563	PDE12	100	91.461	ENSMLEG00000036137	PDE12	100	91.461	Mandrillus_leucophaeus
ENSBTAG00000015563	PDE12	96	59.898	ENSMAMG00000014415	pde12	96	59.391	Mastacembelus_armatus
ENSBTAG00000015563	PDE12	96	58.376	ENSMZEG00005016132	pde12	96	59.208	Maylandia_zebra
ENSBTAG00000015563	PDE12	94	56.131	ENSMZEG00005028202	-	98	56.131	Maylandia_zebra
ENSBTAG00000015563	PDE12	52	80.251	ENSMGAG00000006449	PDE12	99	80.251	Meleagris_gallopavo
ENSBTAG00000015563	PDE12	100	80.750	ENSMAUG00000000442	Pde12	100	79.935	Mesocricetus_auratus
ENSBTAG00000015563	PDE12	100	90.805	ENSMICG00000005723	PDE12	100	90.805	Microcebus_murinus
ENSBTAG00000015563	PDE12	100	88.834	ENSMOCG00000020734	Pde12	100	88.998	Microtus_ochrogaster
ENSBTAG00000015563	PDE12	95	59.380	ENSMMOG00000013636	pde12	95	58.966	Mola_mola
ENSBTAG00000015563	PDE12	100	74.797	ENSMODG00000000155	PDE12	100	75.122	Monodelphis_domestica
ENSBTAG00000015563	PDE12	96	56.514	ENSMALG00000022647	pde12	96	57.022	Monopterus_albus
ENSBTAG00000015563	PDE12	100	89.163	MGP_CAROLIEiJ_G0019032	Pde12	100	89.163	Mus_caroli
ENSBTAG00000015563	PDE12	100	88.998	ENSMUSG00000043702	Pde12	100	88.998	Mus_musculus
ENSBTAG00000015563	PDE12	100	88.342	MGP_PahariEiJ_G0030049	Pde12	100	88.342	Mus_pahari
ENSBTAG00000015563	PDE12	100	89.163	MGP_SPRETEiJ_G0019916	Pde12	100	89.163	Mus_spretus
ENSBTAG00000015563	PDE12	100	92.775	ENSMPUG00000016869	PDE12	100	92.775	Mustela_putorius_furo
ENSBTAG00000015563	PDE12	100	92.118	ENSMLUG00000026487	PDE12	100	92.118	Myotis_lucifugus
ENSBTAG00000015563	PDE12	100	87.028	ENSNGAG00000001228	Pde12	100	87.028	Nannospalax_galili
ENSBTAG00000015563	PDE12	96	53.559	ENSNBRG00000015769	pde12	66	53.559	Neolamprologus_brichardi
ENSBTAG00000015563	PDE12	100	83.850	ENSNLEG00000034833	-	100	83.850	Nomascus_leucogenys
ENSBTAG00000015563	PDE12	100	91.790	ENSNLEG00000007269	-	100	91.790	Nomascus_leucogenys
ENSBTAG00000015563	PDE12	100	73.650	ENSMEUG00000006786	PDE12	100	74.837	Notamacropus_eugenii
ENSBTAG00000015563	PDE12	100	88.599	ENSOPRG00000015273	PDE12	100	88.599	Ochotona_princeps
ENSBTAG00000015563	PDE12	100	90.312	ENSODEG00000006268	PDE12	100	90.312	Octodon_degus
ENSBTAG00000015563	PDE12	94	59.413	ENSONIG00000004293	pde12	100	59.036	Oreochromis_niloticus
ENSBTAG00000015563	PDE12	90	78.766	ENSOANG00000012885	PDE12	99	78.766	Ornithorhynchus_anatinus
ENSBTAG00000015563	PDE12	100	92.951	ENSOCUG00000000823	PDE12	100	93.115	Oryctolagus_cuniculus
ENSBTAG00000015563	PDE12	96	56.441	ENSORLG00000017444	pde12	96	56.684	Oryzias_latipes
ENSBTAG00000015563	PDE12	96	56.441	ENSORLG00020010469	pde12	96	56.176	Oryzias_latipes_hni
ENSBTAG00000015563	PDE12	96	56.102	ENSORLG00015004093	pde12	96	56.610	Oryzias_latipes_hsok
ENSBTAG00000015563	PDE12	97	55.611	ENSOMEG00000020900	pde12	97	55.779	Oryzias_melastigma
ENSBTAG00000015563	PDE12	100	91.626	ENSOGAG00000024093	PDE12	100	91.626	Otolemur_garnettii
ENSBTAG00000015563	PDE12	90	98.734	ENSOARG00000013642	PDE12	100	98.734	Ovis_aries
ENSBTAG00000015563	PDE12	100	91.133	ENSPPAG00000034712	PDE12	100	91.133	Pan_paniscus
ENSBTAG00000015563	PDE12	100	92.447	ENSPPRG00000011738	PDE12	100	92.447	Panthera_pardus
ENSBTAG00000015563	PDE12	83	90.998	ENSPTIG00000019166	PDE12	97	90.998	Panthera_tigris_altaica
ENSBTAG00000015563	PDE12	100	91.297	ENSPTRG00000030221	PDE12	100	91.297	Pan_troglodytes
ENSBTAG00000015563	PDE12	100	91.297	ENSPANG00000007324	PDE12	100	91.297	Papio_anubis
ENSBTAG00000015563	PDE12	100	59.083	ENSPKIG00000025354	pde12	98	58.756	Paramormyrops_kingsleyae
ENSBTAG00000015563	PDE12	95	75.000	ENSPSIG00000004926	PDE12	92	75.387	Pelodiscus_sinensis
ENSBTAG00000015563	PDE12	96	54.730	ENSPMGG00000006742	pde12	99	55.254	Periophthalmus_magnuspinnatus
ENSBTAG00000015563	PDE12	86	90.887	ENSPEMG00000007259	Pde12	99	90.887	Peromyscus_maniculatus_bairdii
ENSBTAG00000015563	PDE12	98	57.833	ENSPFOG00000011864	pde12	97	57.262	Poecilia_formosa
ENSBTAG00000015563	PDE12	72	62.387	ENSPLAG00000023871	pde12	81	62.022	Poecilia_latipinna
ENSBTAG00000015563	PDE12	98	57.333	ENSPMEG00000005674	pde12	98	57.072	Poecilia_mexicana
ENSBTAG00000015563	PDE12	98	57.333	ENSPREG00000022831	pde12	98	57.571	Poecilia_reticulata
ENSBTAG00000015563	PDE12	100	90.640	ENSPPYG00000013769	PDE12	100	91.297	Pongo_abelii
ENSBTAG00000015563	PDE12	100	90.805	ENSPCOG00000026004	PDE12	100	90.805	Propithecus_coquereli
ENSBTAG00000015563	PDE12	100	92.775	ENSPVAG00000008885	PDE12	100	92.775	Pteropus_vampyrus
ENSBTAG00000015563	PDE12	96	58.545	ENSPNYG00000013258	pde12	96	58.545	Pundamilia_nyererei
ENSBTAG00000015563	PDE12	94	62.565	ENSPNAG00000029032	pde12	95	62.912	Pygocentrus_nattereri
ENSBTAG00000015563	PDE12	100	89.327	ENSRNOG00000059442	Pde12	100	89.327	Rattus_norvegicus
ENSBTAG00000015563	PDE12	100	91.133	ENSRBIG00000040704	PDE12	100	91.133	Rhinopithecus_bieti
ENSBTAG00000015563	PDE12	100	91.133	ENSRROG00000031279	PDE12	100	91.133	Rhinopithecus_roxellana
ENSBTAG00000015563	PDE12	100	89.984	ENSSBOG00000023974	PDE12	100	90.476	Saimiri_boliviensis_boliviensis
ENSBTAG00000015563	PDE12	79	63.284	ENSSFOG00015003468	pde12	88	63.284	Scleropages_formosus
ENSBTAG00000015563	PDE12	95	56.724	ENSSMAG00000003258	pde12	95	57.265	Scophthalmus_maximus
ENSBTAG00000015563	PDE12	95	59.655	ENSSDUG00000020470	pde12	95	59.310	Seriola_dumerili
ENSBTAG00000015563	PDE12	95	59.655	ENSSLDG00000019833	pde12	94	59.483	Seriola_lalandi_dorsalis
ENSBTAG00000015563	PDE12	100	90.000	ENSSARG00000007201	PDE12	100	90.000	Sorex_araneus
ENSBTAG00000015563	PDE12	97	58.655	ENSSPAG00000014980	pde12	97	58.487	Stegastes_partitus
ENSBTAG00000015563	PDE12	52	83.912	ENSSSCG00000034476	-	74	83.912	Sus_scrofa
ENSBTAG00000015563	PDE12	100	94.417	ENSSSCG00000011465	-	100	94.417	Sus_scrofa
ENSBTAG00000015563	PDE12	60	81.081	ENSTGUG00000007290	PDE12	100	81.081	Taeniopygia_guttata
ENSBTAG00000015563	PDE12	96	57.868	ENSTRUG00000005159	pde12	96	57.191	Takifugu_rubripes
ENSBTAG00000015563	PDE12	96	57.360	ENSTNIG00000017497	pde12	96	57.191	Tetraodon_nigroviridis
ENSBTAG00000015563	PDE12	80	94.737	ENSTBEG00000008202	PDE12	80	94.737	Tupaia_belangeri
ENSBTAG00000015563	PDE12	100	95.402	ENSTTRG00000014707	PDE12	100	95.402	Tursiops_truncatus
ENSBTAG00000015563	PDE12	76	79.050	ENSUAMG00000008368	-	98	79.050	Ursus_americanus
ENSBTAG00000015563	PDE12	100	93.103	ENSUAMG00000020634	-	100	93.103	Ursus_americanus
ENSBTAG00000015563	PDE12	72	93.349	ENSUMAG00000021906	PDE12	100	93.349	Ursus_maritimus
ENSBTAG00000015563	PDE12	100	91.040	ENSVVUG00000020335	PDE12	100	91.200	Vulpes_vulpes
ENSBTAG00000015563	PDE12	95	55.363	ENSXETG00000008653	pde12	97	55.363	Xenopus_tropicalis
ENSBTAG00000015563	PDE12	95	57.659	ENSXCOG00000000407	pde12	97	57.315	Xiphophorus_couchianus
ENSBTAG00000015563	PDE12	98	56.833	ENSXMAG00000013370	pde12	98	56.355	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	-	IEA	Process
GO:0000958	mitochondrial mRNA catabolic process	-	IEA	Process
GO:0004527	exonuclease activity	15231837.	IMP	Function
GO:0004535	poly(A)-specific ribonuclease activity	-	IEA	Function
GO:0005759	mitochondrial matrix	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0035457	cellular response to interferon-alpha	-	IEA	Process
GO:0044528	regulation of mitochondrial mRNA stability	-	IEA	Process
GO:0045070	positive regulation of viral genome replication	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0060548	negative regulation of cell death	-	IEA	Process
GO:0071346	cellular response to interferon-gamma	-	IEA	Process
GO:0071359	cellular response to dsRNA	-	IEA	Process
GO:0090324	negative regulation of oxidative phosphorylation	-	IEA	Process
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	-	IEA	Process