EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000015572 (Gene tree)
Gene ID: 613858
Gene Symbol: YTHDC1
Alias: -
Full Name: Bos taurus YTH domain containing 1 (YTHDC1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 38368 bases
Position: chr6:84101528-84139895
Accession: NM_001046520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000020694	YTH	PF04146.15	1e-39	1	1
ENSBTAP00000067072	YTH	PF04146.15	1.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000020694	-	3452	XM_005208045	ENSBTAP00000020694	728 (aa)	XP_005208102	F1MIW9
ENSBTAT00000075735	-	2064	-	ENSBTAP00000067072	687 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000015572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000015572's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000015572	YTHDC1	100	97.257	ENSG00000083896	YTHDC1	100	97.257	Homo_sapiens
ENSBTAG00000015572	YTHDC1	57	59.518	ENSAPOG00000013997	ythdc1	57	62.500	Acanthochromis_polyacanthus
ENSBTAG00000015572	YTHDC1	100	97.808	ENSAMEG00000005688	YTHDC1	100	97.808	Ailuropoda_melanoleuca
ENSBTAG00000015572	YTHDC1	71	58.273	ENSACIG00000019728	ythdc1	80	59.330	Amphilophus_citrinellus
ENSBTAG00000015572	YTHDC1	57	61.239	ENSAOCG00000000239	ythdc1	59	66.059	Amphiprion_ocellaris
ENSBTAG00000015572	YTHDC1	91	84.060	ENSAPLG00000009921	YTHDC1	92	84.812	Anas_platyrhynchos
ENSBTAG00000015572	YTHDC1	93	82.963	ENSACAG00000009697	YTHDC1	93	82.963	Anolis_carolinensis
ENSBTAG00000015572	YTHDC1	100	97.394	ENSANAG00000001522	YTHDC1	100	97.394	Aotus_nancymaae
ENSBTAG00000015572	YTHDC1	57	60.092	ENSACLG00000019371	ythdc1	59	65.217	Astatotilapia_calliptera
ENSBTAG00000015572	YTHDC1	93	63.689	ENSAMXG00000006978	ythdc1	92	65.173	Astyanax_mexicanus
ENSBTAG00000015572	YTHDC1	100	97.805	ENSCJAG00000009934	YTHDC1	100	97.805	Callithrix_jacchus
ENSBTAG00000015572	YTHDC1	100	97.671	ENSCAFG00000002821	YTHDC1	100	97.671	Canis_familiaris
ENSBTAG00000015572	YTHDC1	100	97.671	ENSCAFG00020027112	YTHDC1	100	97.671	Canis_lupus_dingo
ENSBTAG00000015572	YTHDC1	98	98.830	ENSCHIG00000004810	YTHDC1	98	98.830	Capra_hircus
ENSBTAG00000015572	YTHDC1	100	97.668	ENSTSYG00000011668	YTHDC1	100	97.668	Carlito_syrichta
ENSBTAG00000015572	YTHDC1	90	67.044	ENSCAPG00000008722	YTHDC1	90	66.517	Cavia_aperea
ENSBTAG00000015572	YTHDC1	100	89.712	ENSCPOG00000010929	YTHDC1	100	89.712	Cavia_porcellus
ENSBTAG00000015572	YTHDC1	100	97.531	ENSCCAG00000035754	YTHDC1	100	97.531	Cebus_capucinus
ENSBTAG00000015572	YTHDC1	100	96.336	ENSCATG00000036320	YTHDC1	100	96.336	Cercocebus_atys
ENSBTAG00000015572	YTHDC1	91	93.452	ENSCLAG00000005482	YTHDC1	92	92.560	Chinchilla_lanigera
ENSBTAG00000015572	YTHDC1	100	97.394	ENSCSAG00000005252	YTHDC1	100	97.394	Chlorocebus_sabaeus
ENSBTAG00000015572	YTHDC1	92	85.863	ENSCPBG00000021965	YTHDC1	94	86.595	Chrysemys_picta_bellii
ENSBTAG00000015572	YTHDC1	100	97.531	ENSCANG00000004769	YTHDC1	100	97.531	Colobus_angolensis_palliatus
ENSBTAG00000015572	YTHDC1	93	92.522	ENSCGRG00001000816	Ythdc1	93	91.935	Cricetulus_griseus_chok1gshd
ENSBTAG00000015572	YTHDC1	91	93.534	ENSCGRG00000009807	Ythdc1	92	92.932	Cricetulus_griseus_crigri
ENSBTAG00000015572	YTHDC1	57	60.132	ENSCSEG00000020404	ythdc1	59	65.068	Cynoglossus_semilaevis
ENSBTAG00000015572	YTHDC1	57	59.202	ENSCVAG00000022349	ythdc1	59	65.138	Cyprinodon_variegatus
ENSBTAG00000015572	YTHDC1	93	63.028	ENSDARG00000051953	ythdc1	58	77.647	Danio_rerio
ENSBTAG00000015572	YTHDC1	100	96.027	ENSDNOG00000004949	YTHDC1	100	96.027	Dasypus_novemcinctus
ENSBTAG00000015572	YTHDC1	99	96.936	ENSDORG00000013045	Ythdc1	100	96.936	Dipodomys_ordii
ENSBTAG00000015572	YTHDC1	78	98.734	ENSETEG00000001878	YTHDC1	70	98.734	Echinops_telfairi
ENSBTAG00000015572	YTHDC1	100	98.219	ENSEASG00005018383	YTHDC1	100	98.219	Equus_asinus_asinus
ENSBTAG00000015572	YTHDC1	100	97.808	ENSECAG00000018303	YTHDC1	100	97.808	Equus_caballus
ENSBTAG00000015572	YTHDC1	100	96.703	ENSEEUG00000015466	YTHDC1	100	96.703	Erinaceus_europaeus
ENSBTAG00000015572	YTHDC1	93	61.331	ENSELUG00000014029	ythdc1	91	60.209	Esox_lucius
ENSBTAG00000015572	YTHDC1	100	97.668	ENSFCAG00000026791	YTHDC1	100	97.668	Felis_catus
ENSBTAG00000015572	YTHDC1	68	88.991	ENSFALG00000006581	YTHDC1	87	96.684	Ficedula_albicollis
ENSBTAG00000015572	YTHDC1	99	96.245	ENSFDAG00000018560	YTHDC1	100	96.245	Fukomys_damarensis
ENSBTAG00000015572	YTHDC1	65	58.730	ENSFHEG00000001286	ythdc1	60	54.819	Fundulus_heteroclitus
ENSBTAG00000015572	YTHDC1	63	63.830	ENSGMOG00000018815	ythdc1	78	62.633	Gadus_morhua
ENSBTAG00000015572	YTHDC1	92	84.501	ENSGALG00000035906	YTHDC1	85	84.211	Gallus_gallus
ENSBTAG00000015572	YTHDC1	57	62.150	ENSGACG00000015486	ythdc1	57	62.238	Gasterosteus_aculeatus
ENSBTAG00000015572	YTHDC1	93	84.627	ENSGAGG00000007108	YTHDC1	93	84.773	Gopherus_agassizii
ENSBTAG00000015572	YTHDC1	100	96.336	ENSGGOG00000021958	YTHDC1	100	96.336	Gorilla_gorilla
ENSBTAG00000015572	YTHDC1	57	59.404	ENSHBUG00000019288	ythdc1	59	65.217	Haplochromis_burtoni
ENSBTAG00000015572	YTHDC1	100	93.553	ENSHGLG00000006319	-	100	93.553	Heterocephalus_glaber_female
ENSBTAG00000015572	YTHDC1	94	70.554	ENSHGLG00000003239	-	57	77.990	Heterocephalus_glaber_female
ENSBTAG00000015572	YTHDC1	93	93.068	ENSHGLG00100001556	-	93	92.920	Heterocephalus_glaber_male
ENSBTAG00000015572	YTHDC1	94	69.086	ENSHGLG00100008060	-	57	75.534	Heterocephalus_glaber_male
ENSBTAG00000015572	YTHDC1	53	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSBTAG00000015572	YTHDC1	93	66.958	ENSIPUG00000018136	ythdc1	61	83.063	Ictalurus_punctatus
ENSBTAG00000015572	YTHDC1	100	96.336	ENSSTOG00000013652	YTHDC1	100	96.336	Ictidomys_tridecemlineatus
ENSBTAG00000015572	YTHDC1	91	89.599	ENSJJAG00000010268	Ythdc1	93	90.045	Jaculus_jaculus
ENSBTAG00000015572	YTHDC1	57	60.274	ENSKMAG00000006483	ythdc1	85	65.068	Kryptolebias_marmoratus
ENSBTAG00000015572	YTHDC1	57	61.283	ENSLBEG00000020831	ythdc1	93	62.648	Labrus_bergylta
ENSBTAG00000015572	YTHDC1	87	73.981	ENSLACG00000004893	YTHDC1	92	74.844	Latimeria_chalumnae
ENSBTAG00000015572	YTHDC1	93	72.821	ENSLOCG00000003045	ythdc1	92	87.981	Lepisosteus_oculatus
ENSBTAG00000015572	YTHDC1	100	94.980	ENSLAFG00000021592	YTHDC1	100	94.980	Loxodonta_africana
ENSBTAG00000015572	YTHDC1	100	96.472	ENSMFAG00000031927	YTHDC1	100	96.472	Macaca_fascicularis
ENSBTAG00000015572	YTHDC1	100	97.531	ENSMMUG00000002265	YTHDC1	100	97.531	Macaca_mulatta
ENSBTAG00000015572	YTHDC1	100	97.531	ENSMNEG00000033751	YTHDC1	100	97.531	Macaca_nemestrina
ENSBTAG00000015572	YTHDC1	100	97.394	ENSMLEG00000042147	YTHDC1	100	97.394	Mandrillus_leucophaeus
ENSBTAG00000015572	YTHDC1	54	56.373	ENSMAMG00000013122	ythdc1	58	65.227	Mastacembelus_armatus
ENSBTAG00000015572	YTHDC1	57	59.404	ENSMZEG00005023173	ythdc1	59	65.217	Maylandia_zebra
ENSBTAG00000015572	YTHDC1	93	83.407	ENSMGAG00000010391	YTHDC1	92	84.148	Meleagris_gallopavo
ENSBTAG00000015572	YTHDC1	93	92.229	ENSMAUG00000001286	Ythdc1	93	91.642	Mesocricetus_auratus
ENSBTAG00000015572	YTHDC1	100	96.065	ENSMICG00000034640	YTHDC1	100	96.065	Microcebus_murinus
ENSBTAG00000015572	YTHDC1	93	93.109	ENSMOCG00000020201	Ythdc1	93	92.082	Microtus_ochrogaster
ENSBTAG00000015572	YTHDC1	87	69.021	ENSMODG00000014337	-	95	69.949	Monodelphis_domestica
ENSBTAG00000015572	YTHDC1	64	57.660	ENSMODG00000009173	-	88	61.353	Monodelphis_domestica
ENSBTAG00000015572	YTHDC1	93	87.982	ENSMODG00000020754	-	92	87.834	Monodelphis_domestica
ENSBTAG00000015572	YTHDC1	96	50.927	ENSMODG00000010076	-	84	54.327	Monodelphis_domestica
ENSBTAG00000015572	YTHDC1	58	67.797	ENSMALG00000013412	ythdc1	56	67.297	Monopterus_albus
ENSBTAG00000015572	YTHDC1	93	94.807	MGP_CAROLIEiJ_G0027347	Ythdc1	97	91.956	Mus_caroli
ENSBTAG00000015572	YTHDC1	93	93.185	ENSMUSG00000035851	Ythdc1	93	93.037	Mus_musculus
ENSBTAG00000015572	YTHDC1	93	93.481	MGP_PahariEiJ_G0017126	Ythdc1	93	93.333	Mus_pahari
ENSBTAG00000015572	YTHDC1	93	93.481	MGP_SPRETEiJ_G0028339	Ythdc1	93	93.333	Mus_spretus
ENSBTAG00000015572	YTHDC1	93	73.560	ENSMPUG00000001743	YTHDC1	74	86.423	Mustela_putorius_furo
ENSBTAG00000015572	YTHDC1	99	97.214	ENSMLUG00000016300	YTHDC1	100	97.214	Myotis_lucifugus
ENSBTAG00000015572	YTHDC1	60	87.016	ENSNGAG00000024000	Ythdc1	93	86.136	Nannospalax_galili
ENSBTAG00000015572	YTHDC1	57	60.187	ENSNBRG00000007663	ythdc1	70	65.421	Neolamprologus_brichardi
ENSBTAG00000015572	YTHDC1	99	95.736	ENSNLEG00000009202	YTHDC1	99	95.736	Nomascus_leucogenys
ENSBTAG00000015572	YTHDC1	85	81.271	ENSMEUG00000007128	YTHDC1	81	81.271	Notamacropus_eugenii
ENSBTAG00000015572	YTHDC1	78	98.584	ENSOPRG00000008986	YTHDC1	74	98.584	Ochotona_princeps
ENSBTAG00000015572	YTHDC1	100	95.604	ENSODEG00000001715	YTHDC1	100	95.604	Octodon_degus
ENSBTAG00000015572	YTHDC1	57	59.862	ENSONIG00000012651	ythdc1	59	65.675	Oreochromis_niloticus
ENSBTAG00000015572	YTHDC1	95	69.859	ENSOANG00000014398	YTHDC1	99	69.859	Ornithorhynchus_anatinus
ENSBTAG00000015572	YTHDC1	93	81.268	ENSOCUG00000015886	YTHDC1	99	73.296	Oryctolagus_cuniculus
ENSBTAG00000015572	YTHDC1	57	60.230	ENSOMEG00000000551	ythdc1	60	64.286	Oryzias_melastigma
ENSBTAG00000015572	YTHDC1	100	96.159	ENSOGAG00000003362	YTHDC1	100	96.159	Otolemur_garnettii
ENSBTAG00000015572	YTHDC1	100	100.000	ENSOARG00000008633	YTHDC1	100	100.000	Ovis_aries
ENSBTAG00000015572	YTHDC1	100	96.472	ENSPPAG00000041315	YTHDC1	100	96.472	Pan_paniscus
ENSBTAG00000015572	YTHDC1	100	96.744	ENSPPRG00000011979	YTHDC1	100	96.744	Panthera_pardus
ENSBTAG00000015572	YTHDC1	99	96.424	ENSPTIG00000015527	YTHDC1	100	96.424	Panthera_tigris_altaica
ENSBTAG00000015572	YTHDC1	100	96.472	ENSPTRG00000016105	YTHDC1	100	96.472	Pan_troglodytes
ENSBTAG00000015572	YTHDC1	100	96.336	ENSPANG00000021590	YTHDC1	100	96.336	Papio_anubis
ENSBTAG00000015572	YTHDC1	93	69.956	ENSPKIG00000018497	ythdc1	93	69.231	Paramormyrops_kingsleyae
ENSBTAG00000015572	YTHDC1	91	85.886	ENSPSIG00000002782	YTHDC1	92	86.036	Pelodiscus_sinensis
ENSBTAG00000015572	YTHDC1	50	63.390	ENSPMGG00000000970	-	73	63.514	Periophthalmus_magnuspinnatus
ENSBTAG00000015572	YTHDC1	91	93.524	ENSPEMG00000013850	Ythdc1	92	92.922	Peromyscus_maniculatus_bairdii
ENSBTAG00000015572	YTHDC1	93	87.834	ENSPCIG00000006870	YTHDC1	92	87.685	Phascolarctos_cinereus
ENSBTAG00000015572	YTHDC1	54	55.314	ENSPFOG00000013404	ythdc1	60	64.073	Poecilia_formosa
ENSBTAG00000015572	YTHDC1	57	59.318	ENSPLAG00000011079	ythdc1	85	64.073	Poecilia_latipinna
ENSBTAG00000015572	YTHDC1	54	55.314	ENSPMEG00000009238	ythdc1	60	64.073	Poecilia_mexicana
ENSBTAG00000015572	YTHDC1	65	71.429	ENSPREG00000016973	ythdc1	59	57.933	Poecilia_reticulata
ENSBTAG00000015572	YTHDC1	87	97.472	ENSPPYG00000014726	YTHDC1	100	97.472	Pongo_abelii
ENSBTAG00000015572	YTHDC1	78	88.636	ENSPCAG00000009607	YTHDC1	77	88.182	Procavia_capensis
ENSBTAG00000015572	YTHDC1	98	95.716	ENSPCOG00000019105	YTHDC1	99	95.716	Propithecus_coquereli
ENSBTAG00000015572	YTHDC1	100	95.759	ENSPVAG00000015551	YTHDC1	100	95.759	Pteropus_vampyrus
ENSBTAG00000015572	YTHDC1	57	60.092	ENSPNYG00000011687	ythdc1	59	65.217	Pundamilia_nyererei
ENSBTAG00000015572	YTHDC1	93	68.406	ENSPNAG00000028365	ythdc1	93	68.497	Pygocentrus_nattereri
ENSBTAG00000015572	YTHDC1	93	91.241	ENSRNOG00000001996	Ythdc1	93	91.825	Rattus_norvegicus
ENSBTAG00000015572	YTHDC1	99	95.192	ENSRBIG00000028279	YTHDC1	99	95.192	Rhinopithecus_bieti
ENSBTAG00000015572	YTHDC1	100	97.531	ENSRROG00000035028	YTHDC1	100	97.531	Rhinopithecus_roxellana
ENSBTAG00000015572	YTHDC1	100	96.744	ENSSBOG00000022353	YTHDC1	100	96.744	Saimiri_boliviensis_boliviensis
ENSBTAG00000015572	YTHDC1	93	86.795	ENSSHAG00000002538	YTHDC1	91	87.519	Sarcophilus_harrisii
ENSBTAG00000015572	YTHDC1	93	68.307	ENSSFOG00015003298	ythdc1	60	85.782	Scleropages_formosus
ENSBTAG00000015572	YTHDC1	56	60.090	ENSSMAG00000009086	ythdc1	60	65.057	Scophthalmus_maximus
ENSBTAG00000015572	YTHDC1	54	56.265	ENSSDUG00000022008	ythdc1	59	66.133	Seriola_dumerili
ENSBTAG00000015572	YTHDC1	54	56.265	ENSSLDG00000007926	ythdc1	59	66.133	Seriola_lalandi_dorsalis
ENSBTAG00000015572	YTHDC1	79	98.960	ENSSARG00000010960	YTHDC1	100	98.960	Sorex_araneus
ENSBTAG00000015572	YTHDC1	93	81.858	ENSSPUG00000009357	YTHDC1	92	83.333	Sphenodon_punctatus
ENSBTAG00000015572	YTHDC1	57	61.927	ENSSPAG00000011449	ythdc1	59	66.972	Stegastes_partitus
ENSBTAG00000015572	YTHDC1	99	97.922	ENSSSCG00000035505	YTHDC1	100	96.892	Sus_scrofa
ENSBTAG00000015572	YTHDC1	93	85.037	ENSTGUG00000004452	-	92	85.185	Taeniopygia_guttata
ENSBTAG00000015572	YTHDC1	60	69.231	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSBTAG00000015572	YTHDC1	86	60.304	ENSTNIG00000013243	ythdc1	89	65.349	Tetraodon_nigroviridis
ENSBTAG00000015572	YTHDC1	93	85.608	ENSTBEG00000011546	YTHDC1	92	86.647	Tupaia_belangeri
ENSBTAG00000015572	YTHDC1	100	97.397	ENSTTRG00000005083	YTHDC1	100	97.397	Tursiops_truncatus
ENSBTAG00000015572	YTHDC1	93	97.788	ENSUAMG00000010388	YTHDC1	100	97.788	Ursus_americanus
ENSBTAG00000015572	YTHDC1	99	83.727	ENSUMAG00000013668	YTHDC1	98	83.727	Ursus_maritimus
ENSBTAG00000015572	YTHDC1	100	95.604	ENSVPAG00000009040	YTHDC1	100	95.604	Vicugna_pacos
ENSBTAG00000015572	YTHDC1	99	96.708	ENSVVUG00000005387	YTHDC1	100	97.644	Vulpes_vulpes
ENSBTAG00000015572	YTHDC1	92	73.591	ENSXETG00000017960	ythdc1	91	71.493	Xenopus_tropicalis
ENSBTAG00000015572	YTHDC1	57	58.186	ENSXMAG00000005196	ythdc1	61	63.991	Xiphophorus_maculatus