EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000015721 (Gene tree)
Gene ID: 100125222
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 14608 bases
Position: chr7:14846394-14861001
Accession: 55304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000073352	RRM_1	PF00076.22	3.1e-29	1	2
ENSBTAP00000073352	RRM_1	PF00076.22	3.1e-29	2	2
ENSBTAP00000066003	RRM_1	PF00076.22	3.8e-29	1	2
ENSBTAP00000066003	RRM_1	PF00076.22	3.8e-29	2	2
ENSBTAP00000065847	RRM_1	PF00076.22	4e-29	1	2
ENSBTAP00000065847	RRM_1	PF00076.22	4e-29	2	2
ENSBTAP00000020887	RRM_1	PF00076.22	5e-29	1	2
ENSBTAP00000020887	RRM_1	PF00076.22	5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000020887	-	4176	-	ENSBTAP00000020887	733 (aa)	-	A4FUZ2
ENSBTAT00000072126	-	2094	-	ENSBTAP00000065847	697 (aa)	-	-
ENSBTAT00000078268	-	2951	-	ENSBTAP00000073352	658 (aa)	-	-
ENSBTAT00000075842	-	4035	-	ENSBTAP00000066003	686 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000015721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000015721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000015721	RAVER1	92	40.028	ENSBTAG00000030686	RAVER2	94	39.372

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000015721	RAVER1	100	95.204	ENSG00000161847	RAVER1	100	90.079	Homo_sapiens
ENSBTAG00000015721	RAVER1	97	51.567	ENSAPOG00000017267	raver1	68	76.596	Acanthochromis_polyacanthus
ENSBTAG00000015721	RAVER1	100	92.800	ENSAMEG00000011738	RAVER1	100	90.369	Ailuropoda_melanoleuca
ENSBTAG00000015721	RAVER1	94	50.857	ENSAOCG00000005128	raver1	89	50.644	Amphiprion_ocellaris
ENSBTAG00000015721	RAVER1	81	75.439	ENSAPEG00000010854	raver1	82	78.846	Amphiprion_percula
ENSBTAG00000015721	RAVER1	97	66.085	ENSATEG00000021004	raver1	86	63.830	Anabas_testudineus
ENSBTAG00000015721	RAVER1	79	76.966	ENSACAG00000008386	-	83	73.590	Anolis_carolinensis
ENSBTAG00000015721	RAVER1	100	95.204	ENSANAG00000028226	RAVER1	100	89.168	Aotus_nancymaae
ENSBTAG00000015721	RAVER1	91	60.494	ENSACLG00000018492	raver1	76	80.769	Astatotilapia_calliptera
ENSBTAG00000015721	RAVER1	82	78.333	ENSAMXG00000005132	raver1	83	84.906	Astyanax_mexicanus
ENSBTAG00000015721	RAVER1	100	94.484	ENSCJAG00000005671	RAVER1	100	89.432	Callithrix_jacchus
ENSBTAG00000015721	RAVER1	100	95.923	ENSCAFG00000017861	RAVER1	100	95.362	Canis_familiaris
ENSBTAG00000015721	RAVER1	98	95.251	ENSCAFG00020024449	RAVER1	100	95.251	Canis_lupus_dingo
ENSBTAG00000015721	RAVER1	97	97.500	ENSCHIG00000006718	RAVER1	100	92.308	Capra_hircus
ENSBTAG00000015721	RAVER1	91	90.581	ENSTSYG00000027107	RAVER1	100	90.581	Carlito_syrichta
ENSBTAG00000015721	RAVER1	86	94.144	ENSCAPG00000002269	RAVER1	100	93.578	Cavia_aperea
ENSBTAG00000015721	RAVER1	97	92.500	ENSCPOG00000001008	RAVER1	100	92.500	Cavia_porcellus
ENSBTAG00000015721	RAVER1	100	94.484	ENSCCAG00000031723	RAVER1	100	89.286	Cebus_capucinus
ENSBTAG00000015721	RAVER1	100	95.204	ENSCATG00000043863	RAVER1	100	90.476	Cercocebus_atys
ENSBTAG00000015721	RAVER1	97	94.000	ENSCLAG00000009336	RAVER1	100	94.000	Chinchilla_lanigera
ENSBTAG00000015721	RAVER1	100	94.964	ENSCSAG00000007317	RAVER1	86	90.344	Chlorocebus_sabaeus
ENSBTAG00000015721	RAVER1	93	79.891	ENSCPBG00000005349	-	82	79.891	Chrysemys_picta_bellii
ENSBTAG00000015721	RAVER1	100	96.316	ENSCANG00000008337	RAVER1	100	90.476	Colobus_angolensis_palliatus
ENSBTAG00000015721	RAVER1	97	92.750	ENSCGRG00001013260	-	100	88.140	Cricetulus_griseus_chok1gshd
ENSBTAG00000015721	RAVER1	97	92.750	ENSCGRG00000015138	-	100	88.140	Cricetulus_griseus_crigri
ENSBTAG00000015721	RAVER1	85	66.022	ENSCSEG00000021092	raver1	86	78.846	Cynoglossus_semilaevis
ENSBTAG00000015721	RAVER1	92	68.169	ENSCVAG00000013971	raver1	92	50.997	Cyprinodon_variegatus
ENSBTAG00000015721	RAVER1	97	53.179	ENSDARG00000052617	raver1	92	52.006	Danio_rerio
ENSBTAG00000015721	RAVER1	88	87.162	ENSDNOG00000035742	-	77	87.162	Dasypus_novemcinctus
ENSBTAG00000015721	RAVER1	96	87.688	ENSDORG00000010106	-	100	81.565	Dipodomys_ordii
ENSBTAG00000015721	RAVER1	69	80.303	ENSETEG00000008201	-	72	90.355	Echinops_telfairi
ENSBTAG00000015721	RAVER1	59	36.971	ENSEBUG00000003030	RAVER1	56	35.698	Eptatretus_burgeri
ENSBTAG00000015721	RAVER1	73	96.000	ENSEASG00005010544	-	93	93.256	Equus_asinus_asinus
ENSBTAG00000015721	RAVER1	100	96.403	ENSECAG00000024966	RAVER1	100	92.744	Equus_caballus
ENSBTAG00000015721	RAVER1	92	70.141	ENSELUG00000023287	raver1	77	70.350	Esox_lucius
ENSBTAG00000015721	RAVER1	100	96.163	ENSFCAG00000009435	RAVER1	100	92.348	Felis_catus
ENSBTAG00000015721	RAVER1	97	93.500	ENSFDAG00000015113	RAVER1	100	88.410	Fukomys_damarensis
ENSBTAG00000015721	RAVER1	96	52.786	ENSGMOG00000003649	raver1	79	61.176	Gadus_morhua
ENSBTAG00000015721	RAVER1	81	43.074	ENSGALG00000050608	-	64	42.053	Gallus_gallus
ENSBTAG00000015721	RAVER1	100	52.138	ENSGAFG00000015944	raver1	86	65.248	Gambusia_affinis
ENSBTAG00000015721	RAVER1	94	67.302	ENSGACG00000013818	raver1	89	66.412	Gasterosteus_aculeatus
ENSBTAG00000015721	RAVER1	90	78.841	ENSGAGG00000011748	-	97	77.480	Gopherus_agassizii
ENSBTAG00000015721	RAVER1	100	94.964	ENSGGOG00000006015	RAVER1	100	89.815	Gorilla_gorilla
ENSBTAG00000015721	RAVER1	96	52.098	ENSHBUG00000021210	raver1	75	78.723	Haplochromis_burtoni
ENSBTAG00000015721	RAVER1	97	91.750	ENSHGLG00000015460	RAVER1	100	91.750	Heterocephalus_glaber_female
ENSBTAG00000015721	RAVER1	97	91.750	ENSHGLG00100000812	RAVER1	100	91.750	Heterocephalus_glaber_male
ENSBTAG00000015721	RAVER1	98	52.354	ENSHCOG00000000449	raver1	61	82.000	Hippocampus_comes
ENSBTAG00000015721	RAVER1	97	54.196	ENSIPUG00000013153	raver1	83	87.755	Ictalurus_punctatus
ENSBTAG00000015721	RAVER1	97	94.279	ENSSTOG00000003241	RAVER1	100	90.946	Ictidomys_tridecemlineatus
ENSBTAG00000015721	RAVER1	97	94.615	ENSJJAG00000018219	-	100	88.306	Jaculus_jaculus
ENSBTAG00000015721	RAVER1	98	52.228	ENSKMAG00000017355	raver1	93	50.272	Kryptolebias_marmoratus
ENSBTAG00000015721	RAVER1	80	55.575	ENSLBEG00000008268	raver1	77	55.240	Labrus_bergylta
ENSBTAG00000015721	RAVER1	86	76.061	ENSLACG00000005809	-	77	88.679	Latimeria_chalumnae
ENSBTAG00000015721	RAVER1	94	70.141	ENSLOCG00000007500	raver1	75	84.615	Lepisosteus_oculatus
ENSBTAG00000015721	RAVER1	97	95.238	ENSLAFG00000003664	-	97	93.750	Loxodonta_africana
ENSBTAG00000015721	RAVER1	100	94.724	ENSMFAG00000037977	RAVER1	100	89.947	Macaca_fascicularis
ENSBTAG00000015721	RAVER1	100	94.724	ENSMMUG00000014897	RAVER1	100	90.212	Macaca_mulatta
ENSBTAG00000015721	RAVER1	100	94.724	ENSMNEG00000028390	RAVER1	100	90.212	Macaca_nemestrina
ENSBTAG00000015721	RAVER1	100	95.204	ENSMLEG00000041959	RAVER1	100	90.212	Mandrillus_leucophaeus
ENSBTAG00000015721	RAVER1	85	77.358	ENSMAMG00000012059	raver1	74	84.000	Mastacembelus_armatus
ENSBTAG00000015721	RAVER1	91	60.494	ENSMZEG00005019002	raver1	92	52.733	Maylandia_zebra
ENSBTAG00000015721	RAVER1	97	91.791	ENSMAUG00000017948	-	100	87.500	Mesocricetus_auratus
ENSBTAG00000015721	RAVER1	99	95.444	ENSMICG00000010326	RAVER1	99	94.571	Microcebus_murinus
ENSBTAG00000015721	RAVER1	97	93.250	ENSMOCG00000015553	-	100	88.275	Microtus_ochrogaster
ENSBTAG00000015721	RAVER1	99	51.796	ENSMMOG00000012093	raver1	81	69.333	Mola_mola
ENSBTAG00000015721	RAVER1	96	83.028	ENSMODG00000005584	-	91	78.212	Monodelphis_domestica
ENSBTAG00000015721	RAVER1	93	68.056	ENSMALG00000016569	raver1	81	82.000	Monopterus_albus
ENSBTAG00000015721	RAVER1	97	92.987	MGP_CAROLIEiJ_G0031860	-	100	86.364	Mus_caroli
ENSBTAG00000015721	RAVER1	97	93.506	ENSMUSG00000010205	Raver1	100	86.765	Mus_musculus
ENSBTAG00000015721	RAVER1	95	93.915	MGP_PahariEiJ_G0014726	-	100	86.303	Mus_pahari
ENSBTAG00000015721	RAVER1	97	93.506	MGP_SPRETEiJ_G0032984	-	100	86.631	Mus_spretus
ENSBTAG00000015721	RAVER1	100	96.163	ENSMPUG00000006712	RAVER1	100	92.084	Mustela_putorius_furo
ENSBTAG00000015721	RAVER1	98	93.994	ENSMLUG00000012328	RAVER1	100	93.994	Myotis_lucifugus
ENSBTAG00000015721	RAVER1	97	91.272	ENSNGAG00000001260	-	100	87.280	Nannospalax_galili
ENSBTAG00000015721	RAVER1	91	61.728	ENSNBRG00000010139	raver1	79	82.692	Neolamprologus_brichardi
ENSBTAG00000015721	RAVER1	100	94.964	ENSNLEG00000012181	RAVER1	100	89.815	Nomascus_leucogenys
ENSBTAG00000015721	RAVER1	86	83.815	ENSMEUG00000003281	-	100	74.398	Notamacropus_eugenii
ENSBTAG00000015721	RAVER1	97	93.750	ENSODEG00000016260	RAVER1	100	93.750	Octodon_degus
ENSBTAG00000015721	RAVER1	92	69.318	ENSONIG00000001559	raver1	87	68.254	Oreochromis_niloticus
ENSBTAG00000015721	RAVER1	100	91.589	ENSOCUG00000020918	RAVER1	95	89.294	Oryctolagus_cuniculus
ENSBTAG00000015721	RAVER1	97	52.601	ENSORLG00000005458	raver1	62	83.673	Oryzias_latipes
ENSBTAG00000015721	RAVER1	97	52.381	ENSORLG00020004392	raver1	62	83.673	Oryzias_latipes_hni
ENSBTAG00000015721	RAVER1	97	52.457	ENSORLG00015017222	raver1	62	83.673	Oryzias_latipes_hsok
ENSBTAG00000015721	RAVER1	97	50.716	ENSOMEG00000023956	raver1	67	81.633	Oryzias_melastigma
ENSBTAG00000015721	RAVER1	100	94.724	ENSOGAG00000011071	RAVER1	100	90.186	Otolemur_garnettii
ENSBTAG00000015721	RAVER1	100	94.005	ENSOARG00000015886	RAVER1	100	90.237	Ovis_aries
ENSBTAG00000015721	RAVER1	100	95.204	ENSPPAG00000002611	RAVER1	100	90.079	Pan_paniscus
ENSBTAG00000015721	RAVER1	100	96.163	ENSPPRG00000009912	RAVER1	100	92.744	Panthera_pardus
ENSBTAG00000015721	RAVER1	100	95.204	ENSPTRG00000010466	RAVER1	100	90.079	Pan_troglodytes
ENSBTAG00000015721	RAVER1	100	95.204	ENSPANG00000004122	RAVER1	100	90.476	Papio_anubis
ENSBTAG00000015721	RAVER1	97	93.500	ENSPEMG00000016411	-	100	88.291	Peromyscus_maniculatus_bairdii
ENSBTAG00000015721	RAVER1	97	86.500	ENSPCIG00000018695	-	100	78.423	Phascolarctos_cinereus
ENSBTAG00000015721	RAVER1	97	53.427	ENSPFOG00000007016	raver1	92	50.763	Poecilia_formosa
ENSBTAG00000015721	RAVER1	97	49.725	ENSPLAG00000020793	raver1	78	68.684	Poecilia_latipinna
ENSBTAG00000015721	RAVER1	100	50.624	ENSPMEG00000011220	raver1	64	80.000	Poecilia_mexicana
ENSBTAG00000015721	RAVER1	73	88.372	ENSPREG00000006864	raver1	65	88.372	Poecilia_reticulata
ENSBTAG00000015721	RAVER1	100	95.444	ENSPPYG00000010514	RAVER1	81	95.444	Pongo_abelii
ENSBTAG00000015721	RAVER1	100	95.923	ENSPCOG00000026605	RAVER1	100	90.526	Propithecus_coquereli
ENSBTAG00000015721	RAVER1	97	95.750	ENSPVAG00000003689	RAVER1	100	90.366	Pteropus_vampyrus
ENSBTAG00000015721	RAVER1	72	82.353	ENSPNYG00000013284	raver1	64	82.353	Pundamilia_nyererei
ENSBTAG00000015721	RAVER1	97	53.531	ENSPNAG00000015476	raver1	61	86.000	Pygocentrus_nattereri
ENSBTAG00000015721	RAVER1	97	94.286	ENSRNOG00000020710	Raver1	100	86.497	Rattus_norvegicus
ENSBTAG00000015721	RAVER1	100	95.204	ENSRBIG00000034702	RAVER1	100	93.052	Rhinopithecus_bieti
ENSBTAG00000015721	RAVER1	100	95.204	ENSRROG00000031186	RAVER1	100	93.188	Rhinopithecus_roxellana
ENSBTAG00000015721	RAVER1	100	92.234	ENSSBOG00000023423	RAVER1	100	92.098	Saimiri_boliviensis_boliviensis
ENSBTAG00000015721	RAVER1	86	85.801	ENSSHAG00000008181	-	90	78.939	Sarcophilus_harrisii
ENSBTAG00000015721	RAVER1	98	50.636	ENSSMAG00000004546	raver1	93	50.411	Scophthalmus_maximus
ENSBTAG00000015721	RAVER1	97	52.461	ENSSDUG00000021063	raver1	75	82.000	Seriola_dumerili
ENSBTAG00000015721	RAVER1	97	52.039	ENSSLDG00000014505	raver1	74	82.000	Seriola_lalandi_dorsalis
ENSBTAG00000015721	RAVER1	97	53.295	ENSSPAG00000000688	raver1	92	52.083	Stegastes_partitus
ENSBTAG00000015721	RAVER1	100	96.403	ENSSSCG00000013650	-	100	96.229	Sus_scrofa
ENSBTAG00000015721	RAVER1	98	52.266	ENSTRUG00000025641	raver1	58	85.714	Takifugu_rubripes
ENSBTAG00000015721	RAVER1	97	96.000	ENSTTRG00000009552	RAVER1	100	92.130	Tursiops_truncatus
ENSBTAG00000015721	RAVER1	100	96.403	ENSUAMG00000020385	RAVER1	100	92.480	Ursus_americanus
ENSBTAG00000015721	RAVER1	100	95.683	ENSVVUG00000028976	RAVER1	100	95.362	Vulpes_vulpes
ENSBTAG00000015721	RAVER1	97	67.568	ENSXETG00000011622	raver1	89	67.568	Xenopus_tropicalis
ENSBTAG00000015721	RAVER1	99	52.257	ENSXCOG00000016368	raver1	94	50.980	Xiphophorus_couchianus
ENSBTAG00000015721	RAVER1	99	52.329	ENSXMAG00000000217	raver1	94	51.329	Xiphophorus_maculatus