EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000015781 (Gene tree)
Gene ID: 614311
Gene Symbol: TRMT13
Alias: -
Full Name: Bos taurus tRNA methyltransferase 13 homolog (TRMT13)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 20316 bases
Position: chr3:43120392-43140707
Accession: NM_001046530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000020955	TRM13	PF05206.14	3.1e-91	1	1
ENSBTAP00000020955	zf-U11-48K	PF05253.12	1.8e-09	1	1
ENSBTAP00000020955	zf-TRM13_CCCH	PF11722.8	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000020955	-	3230	XM_010803227	ENSBTAP00000020955	481 (aa)	XP_010801529	F6R1G6

Gene Model

Click here to download ENSBTAG00000015781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000015781's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000015781	TRMT13	100	90.644	ENSG00000122435	TRMT13	100	90.644	Homo_sapiens
ENSBTAG00000015781	TRMT13	95	48.016	ENSAPOG00000015131	trmt13	99	48.497	Acanthochromis_polyacanthus
ENSBTAG00000015781	TRMT13	100	91.060	ENSAMEG00000008917	TRMT13	100	91.060	Ailuropoda_melanoleuca
ENSBTAG00000015781	TRMT13	97	50.722	ENSACIG00000005804	trmt13	97	50.722	Amphilophus_citrinellus
ENSBTAG00000015781	TRMT13	95	48.911	ENSAOCG00000023585	trmt13	99	48.911	Amphiprion_ocellaris
ENSBTAG00000015781	TRMT13	95	48.611	ENSAPEG00000004025	trmt13	99	48.611	Amphiprion_percula
ENSBTAG00000015781	TRMT13	97	51.867	ENSATEG00000006597	trmt13	98	51.867	Anabas_testudineus
ENSBTAG00000015781	TRMT13	88	67.371	ENSAPLG00000014924	TRMT13	99	67.371	Anas_platyrhynchos
ENSBTAG00000015781	TRMT13	99	62.815	ENSACAG00000003498	TRMT13	100	62.815	Anolis_carolinensis
ENSBTAG00000015781	TRMT13	100	90.229	ENSANAG00000019525	TRMT13	100	90.229	Aotus_nancymaae
ENSBTAG00000015781	TRMT13	96	53.602	ENSACLG00000020018	trmt13	99	53.602	Astatotilapia_calliptera
ENSBTAG00000015781	TRMT13	96	53.715	ENSAMXG00000017963	trmt13	98	53.503	Astyanax_mexicanus
ENSBTAG00000015781	TRMT13	100	88.150	ENSCJAG00000000200	TRMT13	100	88.150	Callithrix_jacchus
ENSBTAG00000015781	TRMT13	65	94.268	ENSCAFG00000020021	TRMT13	99	94.268	Canis_familiaris
ENSBTAG00000015781	TRMT13	57	91.575	ENSCAFG00020011572	TRMT13	95	91.575	Canis_lupus_dingo
ENSBTAG00000015781	TRMT13	100	97.297	ENSCHIG00000015395	TRMT13	100	97.297	Capra_hircus
ENSBTAG00000015781	TRMT13	98	79.915	ENSTSYG00000010811	TRMT13	98	85.859	Carlito_syrichta
ENSBTAG00000015781	TRMT13	75	67.945	ENSCAPG00000009085	TRMT13	100	68.493	Cavia_aperea
ENSBTAG00000015781	TRMT13	100	86.486	ENSCPOG00000000694	TRMT13	100	86.486	Cavia_porcellus
ENSBTAG00000015781	TRMT13	100	90.229	ENSCCAG00000023772	TRMT13	100	90.229	Cebus_capucinus
ENSBTAG00000015781	TRMT13	100	90.229	ENSCATG00000033556	TRMT13	100	90.229	Cercocebus_atys
ENSBTAG00000015781	TRMT13	89	82.904	ENSCLAG00000008220	TRMT13	100	83.138	Chinchilla_lanigera
ENSBTAG00000015781	TRMT13	100	90.437	ENSCSAG00000001506	TRMT13	100	90.437	Chlorocebus_sabaeus
ENSBTAG00000015781	TRMT13	100	69.647	ENSCPBG00000026671	TRMT13	100	69.647	Chrysemys_picta_bellii
ENSBTAG00000015781	TRMT13	100	90.644	ENSCANG00000034659	TRMT13	100	90.644	Colobus_angolensis_palliatus
ENSBTAG00000015781	TRMT13	99	84.407	ENSCGRG00001021601	Trmt13	99	84.407	Cricetulus_griseus_chok1gshd
ENSBTAG00000015781	TRMT13	53	82.490	ENSCGRG00000000093	-	99	82.490	Cricetulus_griseus_crigri
ENSBTAG00000015781	TRMT13	97	48.620	ENSCSEG00000000591	trmt13	99	48.620	Cynoglossus_semilaevis
ENSBTAG00000015781	TRMT13	95	48.632	ENSCVAG00000017342	trmt13	93	49.474	Cyprinodon_variegatus
ENSBTAG00000015781	TRMT13	95	56.681	ENSDARG00000102846	trmt13	96	56.681	Danio_rerio
ENSBTAG00000015781	TRMT13	57	88.043	ENSDNOG00000001710	TRMT13	84	88.043	Dasypus_novemcinctus
ENSBTAG00000015781	TRMT13	100	84.407	ENSDORG00000015808	Trmt13	99	84.407	Dipodomys_ordii
ENSBTAG00000015781	TRMT13	95	30.189	FBgn0037435	CG18048	94	30.189	Drosophila_melanogaster
ENSBTAG00000015781	TRMT13	99	75.365	ENSETEG00000005819	TRMT13	99	75.365	Echinops_telfairi
ENSBTAG00000015781	TRMT13	94	45.887	ENSEBUG00000014444	trmt13	96	45.887	Eptatretus_burgeri
ENSBTAG00000015781	TRMT13	100	92.516	ENSEASG00005015918	TRMT13	100	92.516	Equus_asinus_asinus
ENSBTAG00000015781	TRMT13	100	92.308	ENSECAG00000022626	TRMT13	100	92.308	Equus_caballus
ENSBTAG00000015781	TRMT13	79	79.747	ENSEEUG00000000294	TRMT13	80	79.747	Erinaceus_europaeus
ENSBTAG00000015781	TRMT13	97	55.319	ENSELUG00000003803	trmt13	99	55.839	Esox_lucius
ENSBTAG00000015781	TRMT13	100	93.347	ENSFCAG00000030618	TRMT13	100	93.347	Felis_catus
ENSBTAG00000015781	TRMT13	99	65.063	ENSFALG00000002424	TRMT13	99	65.063	Ficedula_albicollis
ENSBTAG00000015781	TRMT13	99	88.655	ENSFDAG00000006342	TRMT13	99	88.655	Fukomys_damarensis
ENSBTAG00000015781	TRMT13	77	52.332	ENSFHEG00000022954	trmt13	97	51.117	Fundulus_heteroclitus
ENSBTAG00000015781	TRMT13	95	48.571	ENSGMOG00000013223	trmt13	100	49.011	Gadus_morhua
ENSBTAG00000015781	TRMT13	95	66.374	ENSGALG00000005290	TRMT13	96	66.231	Gallus_gallus
ENSBTAG00000015781	TRMT13	77	49.608	ENSGAFG00000001577	trmt13	83	49.608	Gambusia_affinis
ENSBTAG00000015781	TRMT13	95	50.000	ENSGACG00000013428	trmt13	97	50.641	Gasterosteus_aculeatus
ENSBTAG00000015781	TRMT13	100	70.124	ENSGAGG00000023303	TRMT13	99	74.909	Gopherus_agassizii
ENSBTAG00000015781	TRMT13	100	90.437	ENSGGOG00000005616	TRMT13	100	90.437	Gorilla_gorilla
ENSBTAG00000015781	TRMT13	96	54.025	ENSHBUG00000007754	trmt13	99	54.025	Haplochromis_burtoni
ENSBTAG00000015781	TRMT13	99	88.866	ENSHGLG00000002164	TRMT13	99	88.866	Heterocephalus_glaber_female
ENSBTAG00000015781	TRMT13	99	88.866	ENSHGLG00100001618	TRMT13	99	88.866	Heterocephalus_glaber_male
ENSBTAG00000015781	TRMT13	96	48.498	ENSHCOG00000020553	trmt13	98	48.498	Hippocampus_comes
ENSBTAG00000015781	TRMT13	98	54.584	ENSIPUG00000024787	trmt13	99	55.319	Ictalurus_punctatus
ENSBTAG00000015781	TRMT13	100	90.644	ENSSTOG00000013483	TRMT13	100	90.644	Ictidomys_tridecemlineatus
ENSBTAG00000015781	TRMT13	100	85.863	ENSJJAG00000018012	Trmt13	100	85.863	Jaculus_jaculus
ENSBTAG00000015781	TRMT13	63	49.673	ENSKMAG00000007639	trmt13	92	49.673	Kryptolebias_marmoratus
ENSBTAG00000015781	TRMT13	96	49.896	ENSLBEG00000020238	trmt13	99	50.208	Labrus_bergylta
ENSBTAG00000015781	TRMT13	98	60.879	ENSLACG00000013153	TRMT13	99	60.879	Latimeria_chalumnae
ENSBTAG00000015781	TRMT13	96	57.792	ENSLOCG00000000418	trmt13	97	58.190	Lepisosteus_oculatus
ENSBTAG00000015781	TRMT13	77	88.378	ENSLAFG00000002383	TRMT13	100	88.378	Loxodonta_africana
ENSBTAG00000015781	TRMT13	100	90.644	ENSMFAG00000034681	TRMT13	100	90.644	Macaca_fascicularis
ENSBTAG00000015781	TRMT13	100	90.644	ENSMMUG00000004243	TRMT13	100	90.644	Macaca_mulatta
ENSBTAG00000015781	TRMT13	100	90.644	ENSMNEG00000036102	TRMT13	100	90.644	Macaca_nemestrina
ENSBTAG00000015781	TRMT13	100	90.229	ENSMLEG00000034258	TRMT13	100	90.229	Mandrillus_leucophaeus
ENSBTAG00000015781	TRMT13	96	51.153	ENSMAMG00000016597	trmt13	98	51.153	Mastacembelus_armatus
ENSBTAG00000015781	TRMT13	96	53.390	ENSMZEG00005020959	trmt13	99	53.390	Maylandia_zebra
ENSBTAG00000015781	TRMT13	89	66.042	ENSMGAG00000006970	TRMT13	100	66.042	Meleagris_gallopavo
ENSBTAG00000015781	TRMT13	99	83.333	ENSMAUG00000010448	Trmt13	99	83.333	Mesocricetus_auratus
ENSBTAG00000015781	TRMT13	100	90.852	ENSMICG00000005283	TRMT13	100	90.852	Microcebus_murinus
ENSBTAG00000015781	TRMT13	99	81.042	ENSMOCG00000019914	Trmt13	99	81.042	Microtus_ochrogaster
ENSBTAG00000015781	TRMT13	54	51.321	ENSMMOG00000007762	trmt13	89	51.321	Mola_mola
ENSBTAG00000015781	TRMT13	100	77.160	ENSMODG00000003646	TRMT13	100	77.160	Monodelphis_domestica
ENSBTAG00000015781	TRMT13	99	50.000	ENSMALG00000020965	trmt13	99	50.000	Monopterus_albus
ENSBTAG00000015781	TRMT13	99	83.891	MGP_CAROLIEiJ_G0025568	Trmt13	94	90.476	Mus_caroli
ENSBTAG00000015781	TRMT13	99	84.100	ENSMUSG00000033439	Trmt13	94	90.476	Mus_musculus
ENSBTAG00000015781	TRMT13	99	84.519	MGP_PahariEiJ_G0027014	Trmt13	93	90.964	Mus_pahari
ENSBTAG00000015781	TRMT13	99	84.310	MGP_SPRETEiJ_G0026518	Trmt13	94	90.476	Mus_spretus
ENSBTAG00000015781	TRMT13	79	89.764	ENSMPUG00000002078	-	100	89.764	Mustela_putorius_furo
ENSBTAG00000015781	TRMT13	100	78.586	ENSMLUG00000002124	TRMT13	100	78.586	Myotis_lucifugus
ENSBTAG00000015781	TRMT13	99	48.247	ENSNBRG00000006783	trmt13	95	50.000	Neolamprologus_brichardi
ENSBTAG00000015781	TRMT13	100	90.229	ENSNLEG00000035917	TRMT13	100	90.229	Nomascus_leucogenys
ENSBTAG00000015781	TRMT13	51	75.000	ENSMEUG00000013346	-	100	75.000	Notamacropus_eugenii
ENSBTAG00000015781	TRMT13	67	88.235	ENSOPRG00000012048	TRMT13	67	88.235	Ochotona_princeps
ENSBTAG00000015781	TRMT13	98	52.058	ENSONIG00000004574	trmt13	99	53.602	Oreochromis_niloticus
ENSBTAG00000015781	TRMT13	89	73.782	ENSOANG00000012057	TRMT13	99	73.782	Ornithorhynchus_anatinus
ENSBTAG00000015781	TRMT13	100	88.981	ENSOCUG00000023095	TRMT13	100	88.981	Oryctolagus_cuniculus
ENSBTAG00000015781	TRMT13	96	48.729	ENSORLG00000003320	trmt13	99	49.364	Oryzias_latipes
ENSBTAG00000015781	TRMT13	95	49.251	ENSORLG00020005972	trmt13	97	49.476	Oryzias_latipes_hni
ENSBTAG00000015781	TRMT13	96	51.586	ENSORLG00015002270	trmt13	99	52.340	Oryzias_latipes_hsok
ENSBTAG00000015781	TRMT13	97	52.431	ENSOMEG00000006724	trmt13	95	52.431	Oryzias_melastigma
ENSBTAG00000015781	TRMT13	98	91.332	ENSOGAG00000005618	TRMT13	97	91.060	Otolemur_garnettii
ENSBTAG00000015781	TRMT13	100	97.297	ENSOARG00000017983	TRMT13	100	97.297	Ovis_aries
ENSBTAG00000015781	TRMT13	100	90.021	ENSPPAG00000043736	TRMT13	100	90.021	Pan_paniscus
ENSBTAG00000015781	TRMT13	100	93.555	ENSPPRG00000003424	TRMT13	100	93.555	Panthera_pardus
ENSBTAG00000015781	TRMT13	100	93.555	ENSPTIG00000018598	TRMT13	100	93.555	Panthera_tigris_altaica
ENSBTAG00000015781	TRMT13	100	90.021	ENSPTRG00000001001	TRMT13	100	90.021	Pan_troglodytes
ENSBTAG00000015781	TRMT13	100	90.852	ENSPANG00000007598	TRMT13	100	90.852	Papio_anubis
ENSBTAG00000015781	TRMT13	96	55.748	ENSPKIG00000001514	trmt13	98	55.748	Paramormyrops_kingsleyae
ENSBTAG00000015781	TRMT13	86	69.544	ENSPSIG00000012703	TRMT13	99	69.544	Pelodiscus_sinensis
ENSBTAG00000015781	TRMT13	96	51.288	ENSPMGG00000013298	trmt13	94	51.288	Periophthalmus_magnuspinnatus
ENSBTAG00000015781	TRMT13	99	82.083	ENSPEMG00000000275	Trmt13	99	82.083	Peromyscus_maniculatus_bairdii
ENSBTAG00000015781	TRMT13	95	45.397	ENSPMAG00000000823	trmt13	100	45.010	Petromyzon_marinus
ENSBTAG00000015781	TRMT13	99	76.715	ENSPCIG00000007699	TRMT13	99	77.339	Phascolarctos_cinereus
ENSBTAG00000015781	TRMT13	99	48.842	ENSPFOG00000008675	trmt13	98	48.842	Poecilia_formosa
ENSBTAG00000015781	TRMT13	95	48.195	ENSPLAG00000009709	trmt13	99	48.195	Poecilia_latipinna
ENSBTAG00000015781	TRMT13	95	47.021	ENSPMEG00000022954	trmt13	99	47.021	Poecilia_mexicana
ENSBTAG00000015781	TRMT13	79	49.490	ENSPREG00000005645	trmt13	91	50.903	Poecilia_reticulata
ENSBTAG00000015781	TRMT13	100	90.021	ENSPPYG00000001120	TRMT13	100	90.021	Pongo_abelii
ENSBTAG00000015781	TRMT13	100	87.526	ENSPCAG00000002340	TRMT13	100	87.526	Procavia_capensis
ENSBTAG00000015781	TRMT13	100	90.021	ENSPCOG00000017984	TRMT13	100	90.021	Propithecus_coquereli
ENSBTAG00000015781	TRMT13	100	91.268	ENSPVAG00000017430	TRMT13	100	91.268	Pteropus_vampyrus
ENSBTAG00000015781	TRMT13	96	52.119	ENSPNYG00000013690	trmt13	99	52.119	Pundamilia_nyererei
ENSBTAG00000015781	TRMT13	96	54.468	ENSPNAG00000022130	trmt13	98	54.468	Pygocentrus_nattereri
ENSBTAG00000015781	TRMT13	99	84.310	ENSRNOG00000015140	Trmt13	96	84.310	Rattus_norvegicus
ENSBTAG00000015781	TRMT13	100	90.644	ENSRBIG00000037686	TRMT13	100	90.644	Rhinopithecus_bieti
ENSBTAG00000015781	TRMT13	100	90.644	ENSRROG00000044057	TRMT13	100	90.644	Rhinopithecus_roxellana
ENSBTAG00000015781	TRMT13	100	89.813	ENSSBOG00000026541	TRMT13	100	89.813	Saimiri_boliviensis_boliviensis
ENSBTAG00000015781	TRMT13	91	78.032	ENSSHAG00000005213	TRMT13	97	78.032	Sarcophilus_harrisii
ENSBTAG00000015781	TRMT13	98	53.700	ENSSFOG00015017560	trmt13	99	53.700	Scleropages_formosus
ENSBTAG00000015781	TRMT13	99	49.898	ENSSMAG00000014592	trmt13	99	49.898	Scophthalmus_maximus
ENSBTAG00000015781	TRMT13	95	51.055	ENSSDUG00000015508	trmt13	97	50.932	Seriola_dumerili
ENSBTAG00000015781	TRMT13	95	50.734	ENSSLDG00000019060	trmt13	96	50.734	Seriola_lalandi_dorsalis
ENSBTAG00000015781	TRMT13	99	77.263	ENSSARG00000010344	TRMT13	99	77.263	Sorex_araneus
ENSBTAG00000015781	TRMT13	96	67.819	ENSSPUG00000016339	TRMT13	100	67.819	Sphenodon_punctatus
ENSBTAG00000015781	TRMT13	95	52.473	ENSSPAG00000011922	trmt13	98	52.553	Stegastes_partitus
ENSBTAG00000015781	TRMT13	100	93.139	ENSSSCG00000006869	TRMT13	100	93.139	Sus_scrofa
ENSBTAG00000015781	TRMT13	97	66.453	ENSTGUG00000005253	TRMT13	100	66.453	Taeniopygia_guttata
ENSBTAG00000015781	TRMT13	95	50.215	ENSTRUG00000008400	trmt13	99	50.211	Takifugu_rubripes
ENSBTAG00000015781	TRMT13	86	74.279	ENSTBEG00000008911	TRMT13	100	74.279	Tupaia_belangeri
ENSBTAG00000015781	TRMT13	51	94.667	ENSTTRG00000015302	-	60	94.667	Tursiops_truncatus
ENSBTAG00000015781	TRMT13	100	85.655	ENSUAMG00000017251	TRMT13	100	85.655	Ursus_americanus
ENSBTAG00000015781	TRMT13	100	91.268	ENSUMAG00000007901	TRMT13	99	92.593	Ursus_maritimus
ENSBTAG00000015781	TRMT13	90	75.463	ENSVPAG00000001034	TRMT13	100	75.463	Vicugna_pacos
ENSBTAG00000015781	TRMT13	99	92.276	ENSVVUG00000021996	TRMT13	99	92.276	Vulpes_vulpes
ENSBTAG00000015781	TRMT13	95	56.550	ENSXETG00000013204	trmt13	96	56.550	Xenopus_tropicalis
ENSBTAG00000015781	TRMT13	95	47.357	ENSXMAG00000010765	trmt13	99	47.357	Xiphophorus_maculatus