EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000016228 (Gene tree)
Gene ID: 509871
Gene Symbol: NMD3
Alias: -
Full Name: Bos taurus NMD3 ribosome export adaptor (NMD3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 36414 bases
Position: chr1:106150166-106186579
Accession: NM_001075420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000021594	NMD3	PF04981.13	2.5e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000021594	-	2915	-	ENSBTAP00000021594	503 (aa)	-	Q08DS5

Gene Model

Click here to download ENSBTAG00000016228's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG
bta03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000016228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000016228	NMD3	100	94.831	ENSG00000169251	NMD3	100	94.831	Homo_sapiens
ENSBTAG00000016228	NMD3	100	76.786	ENSAPOG00000022912	nmd3	99	76.786	Acanthochromis_polyacanthus
ENSBTAG00000016228	NMD3	100	94.444	ENSAMEG00000001584	NMD3	99	94.444	Ailuropoda_melanoleuca
ENSBTAG00000016228	NMD3	100	72.817	ENSACIG00000015196	nmd3	99	72.817	Amphilophus_citrinellus
ENSBTAG00000016228	NMD3	100	77.183	ENSAOCG00000009086	nmd3	99	77.183	Amphiprion_ocellaris
ENSBTAG00000016228	NMD3	100	77.183	ENSAPEG00000000329	nmd3	99	77.183	Amphiprion_percula
ENSBTAG00000016228	NMD3	100	77.381	ENSATEG00000014351	nmd3	99	77.381	Anabas_testudineus
ENSBTAG00000016228	NMD3	100	78.330	ENSAPLG00000014786	NMD3	99	78.330	Anas_platyrhynchos
ENSBTAG00000016228	NMD3	100	82.306	ENSACAG00000007349	NMD3	99	82.306	Anolis_carolinensis
ENSBTAG00000016228	NMD3	99	93.574	ENSANAG00000026434	NMD3	99	93.574	Aotus_nancymaae
ENSBTAG00000016228	NMD3	100	77.976	ENSACLG00000015520	nmd3	99	77.976	Astatotilapia_calliptera
ENSBTAG00000016228	NMD3	100	77.579	ENSAMXG00000014415	nmd3	99	77.579	Astyanax_mexicanus
ENSBTAG00000016228	NMD3	98	51.195	WBGene00012030	T25G3.3	97	51.195	Caenorhabditis_elegans
ENSBTAG00000016228	NMD3	99	93.964	ENSCJAG00000002900	NMD3	97	93.964	Callithrix_jacchus
ENSBTAG00000016228	NMD3	99	94.769	ENSCAFG00000014352	NMD3	97	94.769	Canis_familiaris
ENSBTAG00000016228	NMD3	100	95.030	ENSCAFG00020021145	NMD3	99	95.030	Canis_lupus_dingo
ENSBTAG00000016228	NMD3	100	98.410	ENSCHIG00000016015	NMD3	100	98.410	Capra_hircus
ENSBTAG00000016228	NMD3	100	93.042	ENSTSYG00000002155	NMD3	99	93.042	Carlito_syrichta
ENSBTAG00000016228	NMD3	80	93.250	ENSCAPG00000017861	NMD3	93	93.250	Cavia_aperea
ENSBTAG00000016228	NMD3	87	93.822	ENSCPOG00000005953	NMD3	94	93.822	Cavia_porcellus
ENSBTAG00000016228	NMD3	100	93.837	ENSCCAG00000037460	NMD3	100	93.837	Cebus_capucinus
ENSBTAG00000016228	NMD3	100	94.632	ENSCATG00000030022	NMD3	100	94.632	Cercocebus_atys
ENSBTAG00000016228	NMD3	100	93.241	ENSCLAG00000003155	NMD3	100	93.241	Chinchilla_lanigera
ENSBTAG00000016228	NMD3	100	94.433	ENSCSAG00000012333	NMD3	100	94.433	Chlorocebus_sabaeus
ENSBTAG00000016228	NMD3	80	94.366	ENSCHOG00000001240	NMD3	80	94.366	Choloepus_hoffmanni
ENSBTAG00000016228	NMD3	100	84.493	ENSCPBG00000018318	NMD3	99	85.412	Chrysemys_picta_bellii
ENSBTAG00000016228	NMD3	97	54.545	ENSCING00000002129	-	97	54.545	Ciona_intestinalis
ENSBTAG00000016228	NMD3	87	55.102	ENSCSAVG00000001120	-	97	55.102	Ciona_savignyi
ENSBTAG00000016228	NMD3	99	89.044	ENSCANG00000042939	NMD3	95	89.044	Colobus_angolensis_palliatus
ENSBTAG00000016228	NMD3	100	78.529	ENSCGRG00001001792	Nmd3	100	78.529	Cricetulus_griseus_chok1gshd
ENSBTAG00000016228	NMD3	97	94.274	ENSCGRG00000007947	Nmd3	98	94.274	Cricetulus_griseus_crigri
ENSBTAG00000016228	NMD3	100	77.183	ENSCSEG00000017954	nmd3	99	77.183	Cynoglossus_semilaevis
ENSBTAG00000016228	NMD3	100	69.841	ENSCVAG00000004672	nmd3	99	69.444	Cyprinodon_variegatus
ENSBTAG00000016228	NMD3	100	76.040	ENSDARG00000015676	nmd3	99	76.040	Danio_rerio
ENSBTAG00000016228	NMD3	100	92.247	ENSDNOG00000045222	NMD3	100	92.247	Dasypus_novemcinctus
ENSBTAG00000016228	NMD3	97	84.426	ENSDORG00000005716	Nmd3	100	84.211	Dipodomys_ordii
ENSBTAG00000016228	NMD3	96	53.157	FBgn0023542	Nmd3	94	53.157	Drosophila_melanogaster
ENSBTAG00000016228	NMD3	100	80.318	ENSETEG00000003168	NMD3	99	80.318	Echinops_telfairi
ENSBTAG00000016228	NMD3	87	59.453	ENSEBUG00000014316	nmd3	96	59.453	Eptatretus_burgeri
ENSBTAG00000016228	NMD3	100	94.036	ENSEASG00005018672	NMD3	100	94.036	Equus_asinus_asinus
ENSBTAG00000016228	NMD3	99	94.366	ENSECAG00000000188	NMD3	97	94.366	Equus_caballus
ENSBTAG00000016228	NMD3	94	69.002	ENSEEUG00000010642	-	100	69.002	Erinaceus_europaeus
ENSBTAG00000016228	NMD3	100	74.802	ENSELUG00000024123	nmd3	99	74.802	Esox_lucius
ENSBTAG00000016228	NMD3	100	94.433	ENSFCAG00000022867	NMD3	99	94.433	Felis_catus
ENSBTAG00000016228	NMD3	94	81.818	ENSFALG00000008711	NMD3	99	81.818	Ficedula_albicollis
ENSBTAG00000016228	NMD3	100	92.857	ENSFDAG00000013724	-	100	92.857	Fukomys_damarensis
ENSBTAG00000016228	NMD3	99	77.264	ENSFDAG00000012197	-	99	77.062	Fukomys_damarensis
ENSBTAG00000016228	NMD3	100	75.595	ENSFHEG00000000415	nmd3	99	75.595	Fundulus_heteroclitus
ENSBTAG00000016228	NMD3	97	74.233	ENSGMOG00000009675	nmd3	99	74.438	Gadus_morhua
ENSBTAG00000016228	NMD3	100	81.113	ENSGALG00000009533	NMD3	99	81.113	Gallus_gallus
ENSBTAG00000016228	NMD3	99	75.848	ENSGAFG00000012798	nmd3	95	75.848	Gambusia_affinis
ENSBTAG00000016228	NMD3	100	76.190	ENSGACG00000010028	nmd3	99	76.190	Gasterosteus_aculeatus
ENSBTAG00000016228	NMD3	100	84.294	ENSGAGG00000006556	NMD3	99	84.294	Gopherus_agassizii
ENSBTAG00000016228	NMD3	100	94.831	ENSGGOG00000007157	NMD3	100	94.831	Gorilla_gorilla
ENSBTAG00000016228	NMD3	99	75.896	ENSGGOG00000028590	-	99	75.896	Gorilla_gorilla
ENSBTAG00000016228	NMD3	100	77.976	ENSHBUG00000001781	nmd3	99	77.976	Haplochromis_burtoni
ENSBTAG00000016228	NMD3	100	75.348	ENSHGLG00000010477	-	100	75.149	Heterocephalus_glaber_female
ENSBTAG00000016228	NMD3	100	94.036	ENSHGLG00000014451	-	100	94.036	Heterocephalus_glaber_female
ENSBTAG00000016228	NMD3	100	94.036	ENSHGLG00100006613	-	100	94.036	Heterocephalus_glaber_male
ENSBTAG00000016228	NMD3	100	75.547	ENSHGLG00100001042	-	100	75.348	Heterocephalus_glaber_male
ENSBTAG00000016228	NMD3	99	76.740	ENSHCOG00000004292	nmd3	92	76.740	Hippocampus_comes
ENSBTAG00000016228	NMD3	100	78.373	ENSIPUG00000005073	nmd3	99	78.373	Ictalurus_punctatus
ENSBTAG00000016228	NMD3	100	95.030	ENSSTOG00000001899	NMD3	100	95.030	Ictidomys_tridecemlineatus
ENSBTAG00000016228	NMD3	97	93.648	ENSJJAG00000019759	Nmd3	99	93.648	Jaculus_jaculus
ENSBTAG00000016228	NMD3	100	77.579	ENSKMAG00000020427	nmd3	99	77.579	Kryptolebias_marmoratus
ENSBTAG00000016228	NMD3	100	76.285	ENSLBEG00000022216	nmd3	99	76.285	Labrus_bergylta
ENSBTAG00000016228	NMD3	99	74.498	ENSLACG00000005731	NMD3	99	77.117	Latimeria_chalumnae
ENSBTAG00000016228	NMD3	100	78.770	ENSLOCG00000003561	nmd3	99	78.968	Lepisosteus_oculatus
ENSBTAG00000016228	NMD3	100	91.468	ENSLAFG00000007231	NMD3	100	91.468	Loxodonta_africana
ENSBTAG00000016228	NMD3	100	94.433	ENSMFAG00000040934	NMD3	100	94.433	Macaca_fascicularis
ENSBTAG00000016228	NMD3	99	93.825	ENSMMUG00000009564	NMD3	99	95.177	Macaca_mulatta
ENSBTAG00000016228	NMD3	100	94.433	ENSMNEG00000034626	NMD3	100	94.433	Macaca_nemestrina
ENSBTAG00000016228	NMD3	88	94.582	ENSMLEG00000002741	NMD3	100	94.582	Mandrillus_leucophaeus
ENSBTAG00000016228	NMD3	100	77.183	ENSMAMG00000012427	nmd3	99	77.183	Mastacembelus_armatus
ENSBTAG00000016228	NMD3	100	77.976	ENSMZEG00005016888	nmd3	99	77.976	Maylandia_zebra
ENSBTAG00000016228	NMD3	100	80.517	ENSMGAG00000010498	NMD3	99	80.517	Meleagris_gallopavo
ENSBTAG00000016228	NMD3	100	93.241	ENSMAUG00000000633	Nmd3	100	93.241	Mesocricetus_auratus
ENSBTAG00000016228	NMD3	100	94.036	ENSMICG00000049196	NMD3	100	94.036	Microcebus_murinus
ENSBTAG00000016228	NMD3	99	92.629	ENSMOCG00000005180	Nmd3	100	92.629	Microtus_ochrogaster
ENSBTAG00000016228	NMD3	100	76.832	ENSMMOG00000012765	nmd3	99	76.832	Mola_mola
ENSBTAG00000016228	NMD3	100	64.672	ENSMODG00000016296	NMD3	100	65.511	Monodelphis_domestica
ENSBTAG00000016228	NMD3	100	77.579	ENSMALG00000009256	nmd3	99	77.778	Monopterus_albus
ENSBTAG00000016228	NMD3	100	92.843	MGP_CAROLIEiJ_G0025069	Nmd3	100	92.843	Mus_caroli
ENSBTAG00000016228	NMD3	100	92.843	ENSMUSG00000027787	Nmd3	100	92.843	Mus_musculus
ENSBTAG00000016228	NMD3	100	92.843	MGP_PahariEiJ_G0026512	Nmd3	100	92.843	Mus_pahari
ENSBTAG00000016228	NMD3	100	93.042	MGP_SPRETEiJ_G0026011	Nmd3	100	93.042	Mus_spretus
ENSBTAG00000016228	NMD3	100	95.229	ENSMPUG00000002955	NMD3	99	95.229	Mustela_putorius_furo
ENSBTAG00000016228	NMD3	100	88.340	ENSMLUG00000000701	NMD3	100	88.340	Myotis_lucifugus
ENSBTAG00000016228	NMD3	99	93.426	ENSNGAG00000012307	Nmd3	99	93.426	Nannospalax_galili
ENSBTAG00000016228	NMD3	100	77.381	ENSNBRG00000003324	nmd3	99	77.381	Neolamprologus_brichardi
ENSBTAG00000016228	NMD3	100	95.030	ENSNLEG00000004655	NMD3	100	95.030	Nomascus_leucogenys
ENSBTAG00000016228	NMD3	73	78.947	ENSOPRG00000007690	-	73	78.947	Ochotona_princeps
ENSBTAG00000016228	NMD3	100	93.837	ENSODEG00000006270	NMD3	100	93.837	Octodon_degus
ENSBTAG00000016228	NMD3	100	78.373	ENSONIG00000003643	nmd3	99	78.373	Oreochromis_niloticus
ENSBTAG00000016228	NMD3	99	95.171	ENSOCUG00000017454	NMD3	99	95.171	Oryctolagus_cuniculus
ENSBTAG00000016228	NMD3	100	76.984	ENSORLG00000006279	nmd3	99	76.984	Oryzias_latipes
ENSBTAG00000016228	NMD3	100	76.786	ENSORLG00020003843	nmd3	99	76.786	Oryzias_latipes_hni
ENSBTAG00000016228	NMD3	100	76.541	ENSORLG00015006379	nmd3	99	76.541	Oryzias_latipes_hsok
ENSBTAG00000016228	NMD3	100	77.579	ENSOMEG00000012144	nmd3	99	77.579	Oryzias_melastigma
ENSBTAG00000016228	NMD3	100	93.241	ENSOGAG00000014910	NMD3	100	93.241	Otolemur_garnettii
ENSBTAG00000016228	NMD3	99	98.196	ENSOARG00000001883	NMD3	97	98.196	Ovis_aries
ENSBTAG00000016228	NMD3	100	94.433	ENSPPAG00000043829	NMD3	100	94.433	Pan_paniscus
ENSBTAG00000016228	NMD3	99	94.024	ENSPPRG00000000724	NMD3	98	94.024	Panthera_pardus
ENSBTAG00000016228	NMD3	100	94.235	ENSPTIG00000016761	NMD3	99	94.235	Panthera_tigris_altaica
ENSBTAG00000016228	NMD3	100	94.433	ENSPTRG00000015586	NMD3	100	94.433	Pan_troglodytes
ENSBTAG00000016228	NMD3	99	94.024	ENSPANG00000006665	NMD3	95	94.024	Papio_anubis
ENSBTAG00000016228	NMD3	100	76.587	ENSPKIG00000009928	nmd3	99	76.587	Paramormyrops_kingsleyae
ENSBTAG00000016228	NMD3	100	83.897	ENSPSIG00000007591	NMD3	99	83.897	Pelodiscus_sinensis
ENSBTAG00000016228	NMD3	100	73.810	ENSPMGG00000014015	nmd3	99	73.810	Periophthalmus_magnuspinnatus
ENSBTAG00000016228	NMD3	100	93.837	ENSPEMG00000021880	Nmd3	100	93.837	Peromyscus_maniculatus_bairdii
ENSBTAG00000016228	NMD3	100	83.499	ENSPCIG00000020869	NMD3	100	83.499	Phascolarctos_cinereus
ENSBTAG00000016228	NMD3	100	76.786	ENSPFOG00000012103	nmd3	99	76.786	Poecilia_formosa
ENSBTAG00000016228	NMD3	100	76.984	ENSPLAG00000008087	nmd3	99	76.984	Poecilia_latipinna
ENSBTAG00000016228	NMD3	100	76.786	ENSPMEG00000008506	nmd3	99	76.786	Poecilia_mexicana
ENSBTAG00000016228	NMD3	100	76.984	ENSPREG00000001848	nmd3	99	76.984	Poecilia_reticulata
ENSBTAG00000016228	NMD3	100	94.831	ENSPPYG00000014263	NMD3	100	94.831	Pongo_abelii
ENSBTAG00000016228	NMD3	91	74.348	ENSPCAG00000009851	NMD3	100	74.348	Procavia_capensis
ENSBTAG00000016228	NMD3	85	91.597	ENSPVAG00000003301	NMD3	85	91.597	Pteropus_vampyrus
ENSBTAG00000016228	NMD3	100	77.778	ENSPNYG00000006778	nmd3	99	77.778	Pundamilia_nyererei
ENSBTAG00000016228	NMD3	100	77.183	ENSPNAG00000009442	nmd3	99	77.183	Pygocentrus_nattereri
ENSBTAG00000016228	NMD3	100	93.042	ENSRNOG00000009310	Nmd3	100	93.042	Rattus_norvegicus
ENSBTAG00000016228	NMD3	100	90.258	ENSRBIG00000040379	NMD3	100	90.258	Rhinopithecus_bieti
ENSBTAG00000016228	NMD3	100	94.831	ENSRROG00000036181	NMD3	100	94.831	Rhinopithecus_roxellana
ENSBTAG00000016228	NMD3	97	42.857	YHR170W	NMD3	97	42.857	Saccharomyces_cerevisiae
ENSBTAG00000016228	NMD3	98	94.908	ENSSBOG00000024021	NMD3	98	94.715	Saimiri_boliviensis_boliviensis
ENSBTAG00000016228	NMD3	100	79.487	ENSSHAG00000016044	NMD3	100	79.487	Sarcophilus_harrisii
ENSBTAG00000016228	NMD3	100	76.786	ENSSFOG00015003609	nmd3	99	76.786	Scleropages_formosus
ENSBTAG00000016228	NMD3	100	75.595	ENSSMAG00000012887	nmd3	99	75.595	Scophthalmus_maximus
ENSBTAG00000016228	NMD3	100	77.381	ENSSDUG00000023721	nmd3	99	77.381	Seriola_dumerili
ENSBTAG00000016228	NMD3	100	77.183	ENSSLDG00000006565	nmd3	99	77.183	Seriola_lalandi_dorsalis
ENSBTAG00000016228	NMD3	97	93.238	ENSSARG00000010402	NMD3	99	93.238	Sorex_araneus
ENSBTAG00000016228	NMD3	99	82.129	ENSSPUG00000018791	NMD3	99	82.129	Sphenodon_punctatus
ENSBTAG00000016228	NMD3	100	77.381	ENSSPAG00000014328	nmd3	99	77.381	Stegastes_partitus
ENSBTAG00000016228	NMD3	100	95.825	ENSSSCG00000022952	NMD3	100	95.825	Sus_scrofa
ENSBTAG00000016228	NMD3	91	80.694	ENSTGUG00000015141	-	100	80.694	Taeniopygia_guttata
ENSBTAG00000016228	NMD3	100	80.716	ENSTGUG00000011140	-	100	80.716	Taeniopygia_guttata
ENSBTAG00000016228	NMD3	100	75.992	ENSTRUG00000005958	nmd3	99	75.992	Takifugu_rubripes
ENSBTAG00000016228	NMD3	100	66.998	ENSTBEG00000011783	-	100	66.998	Tupaia_belangeri
ENSBTAG00000016228	NMD3	100	91.451	ENSTTRG00000012938	NMD3	100	91.451	Tursiops_truncatus
ENSBTAG00000016228	NMD3	80	94.527	ENSUAMG00000009305	-	99	94.527	Ursus_americanus
ENSBTAG00000016228	NMD3	99	94.177	ENSUMAG00000011070	NMD3	99	94.165	Ursus_maritimus
ENSBTAG00000016228	NMD3	100	96.223	ENSVPAG00000008779	NMD3	100	96.223	Vicugna_pacos
ENSBTAG00000016228	NMD3	100	95.030	ENSVVUG00000023055	NMD3	99	95.030	Vulpes_vulpes
ENSBTAG00000016228	NMD3	100	81.511	ENSXETG00000027727	nmd3	99	81.511	Xenopus_tropicalis
ENSBTAG00000016228	NMD3	69	70.892	ENSXCOG00000012490	nmd3	81	75.000	Xiphophorus_couchianus
ENSBTAG00000016228	NMD3	100	76.587	ENSXMAG00000018406	nmd3	99	76.587	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005730	nucleolus	-	IEA	Component