EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000016235 (Gene tree)
Gene ID: 613354
Gene Symbol: RNASEH1
Alias: -
Full Name: Bos taurus ribonuclease H1 (RNASEH1)%2C transcript variant 1%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 9244 bases
Position: chr8:111002463-111011706
Accession: NM_001285778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000021600	RNase_H	PF00075.24	6.2e-45	1	1
ENSBTAP00000063545	RNase_H	PF00075.24	7.6e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000080197	-	1339	-	ENSBTAP00000063545	298 (aa)	-	UPI0003B2D59A
ENSBTAT00000021600	-	1300	-	ENSBTAP00000021600	280 (aa)	-	F1N2X2

Gene Model

Click here to download ENSBTAG00000016235's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000016235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000016235	RNASEH1	100	78.322	ENSG00000171865	RNASEH1	100	78.322	Homo_sapiens
ENSBTAG00000016235	RNASEH1	91	56.929	ENSAPOG00000000412	rnaseh1	89	57.678	Acanthochromis_polyacanthus
ENSBTAG00000016235	RNASEH1	94	81.439	ENSAMEG00000018433	RNASEH1	100	79.298	Ailuropoda_melanoleuca
ENSBTAG00000016235	RNASEH1	99	53.020	ENSACIG00000014666	rnaseh1	96	53.356	Amphilophus_citrinellus
ENSBTAG00000016235	RNASEH1	91	58.801	ENSAOCG00000015210	rnaseh1	89	59.176	Amphiprion_ocellaris
ENSBTAG00000016235	RNASEH1	99	56.552	ENSAPEG00000014104	rnaseh1	96	56.897	Amphiprion_percula
ENSBTAG00000016235	RNASEH1	99	54.138	ENSATEG00000000598	rnaseh1	94	56.554	Anabas_testudineus
ENSBTAG00000016235	RNASEH1	87	60.547	ENSAPLG00000001961	RNASEH1	100	60.547	Anas_platyrhynchos
ENSBTAG00000016235	RNASEH1	92	53.535	ENSACAG00000016857	rnaseh1	92	53.535	Anolis_carolinensis
ENSBTAG00000016235	RNASEH1	100	79.371	ENSANAG00000024055	RNASEH1	100	79.371	Aotus_nancymaae
ENSBTAG00000016235	RNASEH1	99	52.145	ENSACLG00000006741	rnaseh1	96	52.475	Astatotilapia_calliptera
ENSBTAG00000016235	RNASEH1	90	53.725	ENSAMXG00000042940	rnaseh1	96	52.652	Astyanax_mexicanus
ENSBTAG00000016235	RNASEH1	90	40.711	WBGene00004382	rnh-1.0	95	40.711	Caenorhabditis_elegans
ENSBTAG00000016235	RNASEH1	100	78.276	ENSCJAG00000035450	RNASEH1	100	78.276	Callithrix_jacchus
ENSBTAG00000016235	RNASEH1	100	79.649	ENSCAFG00000003259	RNASEH1	100	79.649	Canis_familiaris
ENSBTAG00000016235	RNASEH1	55	85.714	ENSCAFG00020004994	RNASEH1	99	85.714	Canis_lupus_dingo
ENSBTAG00000016235	RNASEH1	100	93.333	ENSCHIG00000022264	-	100	93.333	Capra_hircus
ENSBTAG00000016235	RNASEH1	84	79.325	ENSCHIG00000022230	-	100	79.325	Capra_hircus
ENSBTAG00000016235	RNASEH1	100	80.070	ENSTSYG00000012926	RNASEH1	99	80.070	Carlito_syrichta
ENSBTAG00000016235	RNASEH1	86	85.185	ENSCAPG00000004813	RNASEH1	99	85.185	Cavia_aperea
ENSBTAG00000016235	RNASEH1	100	79.791	ENSCPOG00000022278	Rnaseh1	97	79.791	Cavia_porcellus
ENSBTAG00000016235	RNASEH1	100	79.514	ENSCCAG00000038017	RNASEH1	100	79.514	Cebus_capucinus
ENSBTAG00000016235	RNASEH1	100	77.273	ENSCATG00000016515	-	100	77.273	Cercocebus_atys
ENSBTAG00000016235	RNASEH1	100	70.775	ENSCATG00000016818	-	100	70.775	Cercocebus_atys
ENSBTAG00000016235	RNASEH1	100	77.972	ENSCLAG00000002440	RNASEH1	100	77.972	Chinchilla_lanigera
ENSBTAG00000016235	RNASEH1	100	77.273	ENSCSAG00000006943	RNASEH1	100	77.273	Chlorocebus_sabaeus
ENSBTAG00000016235	RNASEH1	72	80.882	ENSCHOG00000008547	RNASEH1	100	80.882	Choloepus_hoffmanni
ENSBTAG00000016235	RNASEH1	91	62.731	ENSCPBG00000021620	RNASEH1	98	62.782	Chrysemys_picta_bellii
ENSBTAG00000016235	RNASEH1	93	39.350	ENSCING00000014054	-	93	40.000	Ciona_intestinalis
ENSBTAG00000016235	RNASEH1	76	39.035	ENSCSAVG00000000009	-	96	39.035	Ciona_savignyi
ENSBTAG00000016235	RNASEH1	100	77.273	ENSCANG00000037763	RNASEH1	100	77.273	Colobus_angolensis_palliatus
ENSBTAG00000016235	RNASEH1	100	75.439	ENSCGRG00001008950	Rnaseh1	100	75.789	Cricetulus_griseus_chok1gshd
ENSBTAG00000016235	RNASEH1	100	75.439	ENSCGRG00000006029	Rnaseh1	100	75.789	Cricetulus_griseus_crigri
ENSBTAG00000016235	RNASEH1	98	50.699	ENSCSEG00000005741	rnaseh1	93	52.239	Cynoglossus_semilaevis
ENSBTAG00000016235	RNASEH1	91	57.678	ENSCVAG00000018717	rnaseh1	88	57.678	Cyprinodon_variegatus
ENSBTAG00000016235	RNASEH1	92	54.317	ENSDARG00000042571	rnaseh1	97	54.851	Danio_rerio
ENSBTAG00000016235	RNASEH1	100	76.307	ENSDNOG00000016056	RNASEH1	100	76.307	Dasypus_novemcinctus
ENSBTAG00000016235	RNASEH1	100	78.169	ENSDORG00000000704	Rnaseh1	100	78.169	Dipodomys_ordii
ENSBTAG00000016235	RNASEH1	92	36.333	FBgn0023171	rnh1	94	36.333	Drosophila_melanogaster
ENSBTAG00000016235	RNASEH1	100	72.125	ENSETEG00000012674	RNASEH1	100	72.125	Echinops_telfairi
ENSBTAG00000016235	RNASEH1	91	44.257	ENSEBUG00000008898	rnaseh1	97	44.257	Eptatretus_burgeri
ENSBTAG00000016235	RNASEH1	93	45.725	ENSEBUG00000006116	rnaseh1	80	45.725	Eptatretus_burgeri
ENSBTAG00000016235	RNASEH1	100	82.578	ENSEASG00005022200	RNASEH1	98	82.578	Equus_asinus_asinus
ENSBTAG00000016235	RNASEH1	100	82.578	ENSECAG00000020695	RNASEH1	98	82.578	Equus_caballus
ENSBTAG00000016235	RNASEH1	98	53.443	ENSELUG00000010112	rnaseh1	98	53.443	Esox_lucius
ENSBTAG00000016235	RNASEH1	100	80.000	ENSFCAG00000025832	RNASEH1	100	80.000	Felis_catus
ENSBTAG00000016235	RNASEH1	93	59.859	ENSFALG00000002069	RNASEH1	94	59.859	Ficedula_albicollis
ENSBTAG00000016235	RNASEH1	100	73.776	ENSFDAG00000002035	RNASEH1	88	73.776	Fukomys_damarensis
ENSBTAG00000016235	RNASEH1	91	56.458	ENSGMOG00000013818	rnaseh1	88	57.034	Gadus_morhua
ENSBTAG00000016235	RNASEH1	95	58.885	ENSGALG00000016389	RNASEH1	97	58.885	Gallus_gallus
ENSBTAG00000016235	RNASEH1	92	56.727	ENSGAFG00000001776	rnaseh1	91	57.249	Gambusia_affinis
ENSBTAG00000016235	RNASEH1	99	54.237	ENSGACG00000011935	rnaseh1	99	54.237	Gasterosteus_aculeatus
ENSBTAG00000016235	RNASEH1	91	61.029	ENSGAGG00000009150	RNASEH1	61	62.593	Gopherus_agassizii
ENSBTAG00000016235	RNASEH1	100	77.273	ENSGGOG00000034822	RNASEH1	100	77.273	Gorilla_gorilla
ENSBTAG00000016235	RNASEH1	99	52.475	ENSHBUG00000004666	rnaseh1	96	52.805	Haplochromis_burtoni
ENSBTAG00000016235	RNASEH1	99	74.912	ENSHGLG00000002585	Rnaseh1	91	74.912	Heterocephalus_glaber_female
ENSBTAG00000016235	RNASEH1	99	74.912	ENSHGLG00100005105	Rnaseh1	91	74.912	Heterocephalus_glaber_male
ENSBTAG00000016235	RNASEH1	91	55.755	ENSHCOG00000012329	rnaseh1	88	56.667	Hippocampus_comes
ENSBTAG00000016235	RNASEH1	92	59.144	ENSIPUG00000023060	rnaseh1	97	59.144	Ictalurus_punctatus
ENSBTAG00000016235	RNASEH1	92	80.385	ENSSTOG00000012774	RNASEH1	99	77.857	Ictidomys_tridecemlineatus
ENSBTAG00000016235	RNASEH1	90	73.541	ENSJJAG00000020238	Rnaseh1	100	73.541	Jaculus_jaculus
ENSBTAG00000016235	RNASEH1	100	68.421	ENSJJAG00000021481	-	100	68.421	Jaculus_jaculus
ENSBTAG00000016235	RNASEH1	100	61.566	ENSJJAG00000008994	-	100	61.566	Jaculus_jaculus
ENSBTAG00000016235	RNASEH1	91	56.015	ENSKMAG00000001373	rnaseh1	89	56.015	Kryptolebias_marmoratus
ENSBTAG00000016235	RNASEH1	99	50.336	ENSLBEG00000004480	rnaseh1	95	55.894	Labrus_bergylta
ENSBTAG00000016235	RNASEH1	91	54.545	ENSLACG00000007100	RNASEH1	87	55.515	Latimeria_chalumnae
ENSBTAG00000016235	RNASEH1	92	57.721	ENSLOCG00000017212	rnaseh1	98	57.721	Lepisosteus_oculatus
ENSBTAG00000016235	RNASEH1	99	79.930	ENSLAFG00000015091	RNASEH1	99	79.930	Loxodonta_africana
ENSBTAG00000016235	RNASEH1	100	77.972	ENSMFAG00000000063	-	100	77.972	Macaca_fascicularis
ENSBTAG00000016235	RNASEH1	100	70.070	ENSMFAG00000002323	-	100	70.070	Macaca_fascicularis
ENSBTAG00000016235	RNASEH1	100	70.775	ENSMMUG00000019280	-	100	70.775	Macaca_mulatta
ENSBTAG00000016235	RNASEH1	100	77.972	ENSMNEG00000040183	-	100	77.972	Macaca_nemestrina
ENSBTAG00000016235	RNASEH1	100	71.127	ENSMNEG00000029676	-	100	71.127	Macaca_nemestrina
ENSBTAG00000016235	RNASEH1	86	80.658	ENSMLEG00000039352	-	100	80.658	Mandrillus_leucophaeus
ENSBTAG00000016235	RNASEH1	100	72.535	ENSMLEG00000028662	-	100	72.535	Mandrillus_leucophaeus
ENSBTAG00000016235	RNASEH1	91	58.955	ENSMAMG00000019725	rnaseh1	94	58.955	Mastacembelus_armatus
ENSBTAG00000016235	RNASEH1	99	52.145	ENSMZEG00005013006	rnaseh1	96	52.475	Maylandia_zebra
ENSBTAG00000016235	RNASEH1	81	57.613	ENSMGAG00000013979	RNASEH1	99	57.613	Meleagris_gallopavo
ENSBTAG00000016235	RNASEH1	99	76.241	ENSMAUG00000014957	Rnaseh1	99	76.241	Mesocricetus_auratus
ENSBTAG00000016235	RNASEH1	100	81.338	ENSMICG00000033156	RNASEH1	99	81.338	Microcebus_murinus
ENSBTAG00000016235	RNASEH1	99	74.737	ENSMOCG00000015522	Rnaseh1	99	74.737	Microtus_ochrogaster
ENSBTAG00000016235	RNASEH1	98	52.414	ENSMMOG00000015902	rnaseh1	96	52.414	Mola_mola
ENSBTAG00000016235	RNASEH1	99	68.551	ENSMODG00000014491	-	98	68.551	Monodelphis_domestica
ENSBTAG00000016235	RNASEH1	80	62.555	ENSMODG00000028814	-	92	62.555	Monodelphis_domestica
ENSBTAG00000016235	RNASEH1	91	56.180	ENSMALG00000010565	rnaseh1	89	56.180	Monopterus_albus
ENSBTAG00000016235	RNASEH1	100	74.737	MGP_CAROLIEiJ_G0017660	Rnaseh1	100	74.737	Mus_caroli
ENSBTAG00000016235	RNASEH1	100	75.088	ENSMUSG00000020630	Rnaseh1	100	75.088	Mus_musculus
ENSBTAG00000016235	RNASEH1	99	75.177	MGP_PahariEiJ_G0029418	Rnaseh1	99	75.532	Mus_pahari
ENSBTAG00000016235	RNASEH1	100	75.088	MGP_SPRETEiJ_G0018502	Rnaseh1	100	75.088	Mus_spretus
ENSBTAG00000016235	RNASEH1	74	79.126	ENSMPUG00000012984	RNASEH1	100	79.126	Mustela_putorius_furo
ENSBTAG00000016235	RNASEH1	96	79.336	ENSNGAG00000015966	Rnaseh1	89	79.336	Nannospalax_galili
ENSBTAG00000016235	RNASEH1	99	50.968	ENSNBRG00000008739	rnaseh1	96	53.199	Neolamprologus_brichardi
ENSBTAG00000016235	RNASEH1	87	70.850	ENSNLEG00000000059	-	93	70.850	Nomascus_leucogenys
ENSBTAG00000016235	RNASEH1	100	67.014	ENSNLEG00000015400	RNASEH1	100	67.014	Nomascus_leucogenys
ENSBTAG00000016235	RNASEH1	99	48.936	ENSMEUG00000003610	-	99	48.936	Notamacropus_eugenii
ENSBTAG00000016235	RNASEH1	100	72.822	ENSOPRG00000005072	RNASEH1	99	72.822	Ochotona_princeps
ENSBTAG00000016235	RNASEH1	99	76.325	ENSODEG00000000235	Rnaseh1	96	76.325	Octodon_degus
ENSBTAG00000016235	RNASEH1	91	56.458	ENSONIG00000018697	rnaseh1	97	56.458	Oreochromis_niloticus
ENSBTAG00000016235	RNASEH1	100	77.972	ENSOCUG00000006117	RNASEH1	100	77.972	Oryctolagus_cuniculus
ENSBTAG00000016235	RNASEH1	91	57.519	ENSORLG00000018127	rnaseh1	95	57.519	Oryzias_latipes
ENSBTAG00000016235	RNASEH1	91	57.519	ENSORLG00020013660	rnaseh1	88	57.519	Oryzias_latipes_hni
ENSBTAG00000016235	RNASEH1	91	57.519	ENSORLG00015011338	rnaseh1	88	57.519	Oryzias_latipes_hsok
ENSBTAG00000016235	RNASEH1	83	56.612	ENSOMEG00000004710	rnaseh1	90	56.612	Oryzias_melastigma
ENSBTAG00000016235	RNASEH1	100	80.139	ENSOGAG00000017176	RNASEH1	100	80.139	Otolemur_garnettii
ENSBTAG00000016235	RNASEH1	100	78.621	ENSOARG00000005386	RNASEH1	100	78.621	Ovis_aries
ENSBTAG00000016235	RNASEH1	100	78.322	ENSPPAG00000034221	RNASEH1	100	78.322	Pan_paniscus
ENSBTAG00000016235	RNASEH1	100	80.351	ENSPPRG00000015513	RNASEH1	100	80.351	Panthera_pardus
ENSBTAG00000016235	RNASEH1	86	82.500	ENSPTIG00000019034	RNASEH1	85	82.500	Panthera_tigris_altaica
ENSBTAG00000016235	RNASEH1	100	78.322	ENSPTRG00000011614	RNASEH1	100	78.322	Pan_troglodytes
ENSBTAG00000016235	RNASEH1	91	69.434	ENSPTRG00000043403	-	99	69.434	Pan_troglodytes
ENSBTAG00000016235	RNASEH1	100	76.923	ENSPANG00000000443	RNASEH1	100	78.862	Papio_anubis
ENSBTAG00000016235	RNASEH1	100	67.958	ENSPANG00000018246	-	100	67.958	Papio_anubis
ENSBTAG00000016235	RNASEH1	91	52.672	ENSPKIG00000003146	rnaseh1	97	52.672	Paramormyrops_kingsleyae
ENSBTAG00000016235	RNASEH1	98	58.644	ENSPSIG00000002937	RNASEH1	98	61.049	Pelodiscus_sinensis
ENSBTAG00000016235	RNASEH1	90	56.126	ENSPMGG00000017463	rnaseh1	90	56.126	Periophthalmus_magnuspinnatus
ENSBTAG00000016235	RNASEH1	100	73.868	ENSPEMG00000022465	-	100	74.913	Peromyscus_maniculatus_bairdii
ENSBTAG00000016235	RNASEH1	99	65.724	ENSPCIG00000023334	-	98	65.724	Phascolarctos_cinereus
ENSBTAG00000016235	RNASEH1	52	44.898	ENSPCIG00000026047	-	83	44.898	Phascolarctos_cinereus
ENSBTAG00000016235	RNASEH1	91	56.716	ENSPFOG00000002841	rnaseh1	91	56.716	Poecilia_formosa
ENSBTAG00000016235	RNASEH1	65	51.323	ENSPLAG00000021349	-	74	51.323	Poecilia_latipinna
ENSBTAG00000016235	RNASEH1	91	57.037	ENSPMEG00000016826	rnaseh1	91	57.037	Poecilia_mexicana
ENSBTAG00000016235	RNASEH1	99	53.156	ENSPREG00000012197	rnaseh1	99	53.156	Poecilia_reticulata
ENSBTAG00000016235	RNASEH1	100	67.483	ENSPPYG00000025873	RNASEH1	100	67.483	Pongo_abelii
ENSBTAG00000016235	RNASEH1	91	73.180	ENSPPYG00000008067	-	100	73.180	Pongo_abelii
ENSBTAG00000016235	RNASEH1	99	74.825	ENSPCAG00000002500	RNASEH1	99	74.825	Procavia_capensis
ENSBTAG00000016235	RNASEH1	100	73.592	ENSPCOG00000019444	RNASEH1	99	73.592	Propithecus_coquereli
ENSBTAG00000016235	RNASEH1	99	78.799	ENSPVAG00000002070	RNASEH1	99	78.799	Pteropus_vampyrus
ENSBTAG00000016235	RNASEH1	99	51.815	ENSPNYG00000001292	rnaseh1	96	52.145	Pundamilia_nyererei
ENSBTAG00000016235	RNASEH1	92	58.935	ENSPNAG00000022344	rnaseh1	90	58.935	Pygocentrus_nattereri
ENSBTAG00000016235	RNASEH1	99	76.241	ENSRNOG00000008584	Rnaseh1	99	76.596	Rattus_norvegicus
ENSBTAG00000016235	RNASEH1	100	77.622	ENSRBIG00000034222	RNASEH1	99	77.622	Rhinopithecus_bieti
ENSBTAG00000016235	RNASEH1	100	77.622	ENSRROG00000041761	RNASEH1	99	77.622	Rhinopithecus_roxellana
ENSBTAG00000016235	RNASEH1	100	78.125	ENSSBOG00000025411	RNASEH1	100	78.125	Saimiri_boliviensis_boliviensis
ENSBTAG00000016235	RNASEH1	100	68.421	ENSSHAG00000013051	RNASEH1	98	68.421	Sarcophilus_harrisii
ENSBTAG00000016235	RNASEH1	92	50.534	ENSSFOG00015002709	rnaseh1	91	50.534	Scleropages_formosus
ENSBTAG00000016235	RNASEH1	99	53.741	ENSSMAG00000007586	rnaseh1	97	53.741	Scophthalmus_maximus
ENSBTAG00000016235	RNASEH1	91	54.682	ENSSDUG00000008217	rnaseh1	94	55.431	Seriola_dumerili
ENSBTAG00000016235	RNASEH1	94	51.460	ENSSLDG00000000442	rnaseh1	94	54.762	Seriola_lalandi_dorsalis
ENSBTAG00000016235	RNASEH1	99	55.822	ENSSPUG00000006644	RNASEH1	99	55.822	Sphenodon_punctatus
ENSBTAG00000016235	RNASEH1	91	58.427	ENSSPAG00000009353	rnaseh1	88	59.176	Stegastes_partitus
ENSBTAG00000016235	RNASEH1	94	83.774	ENSSSCG00000025305	RNASEH1	99	81.818	Sus_scrofa
ENSBTAG00000016235	RNASEH1	99	56.811	ENSTGUG00000012980	RNASEH1	99	56.811	Taeniopygia_guttata
ENSBTAG00000016235	RNASEH1	92	54.874	ENSTRUG00000015774	rnaseh1	96	55.597	Takifugu_rubripes
ENSBTAG00000016235	RNASEH1	91	60.821	ENSTNIG00000010715	rnaseh1	96	60.821	Tetraodon_nigroviridis
ENSBTAG00000016235	RNASEH1	100	78.397	ENSTTRG00000001615	RNASEH1	100	78.397	Tursiops_truncatus
ENSBTAG00000016235	RNASEH1	57	83.648	ENSUAMG00000018254	RNASEH1	82	83.648	Ursus_americanus
ENSBTAG00000016235	RNASEH1	70	77.949	ENSUMAG00000003941	RNASEH1	65	77.949	Ursus_maritimus
ENSBTAG00000016235	RNASEH1	100	69.686	ENSVPAG00000011589	RNASEH1	100	69.686	Vicugna_pacos
ENSBTAG00000016235	RNASEH1	100	80.702	ENSVVUG00000008633	RNASEH1	90	80.702	Vulpes_vulpes
ENSBTAG00000016235	RNASEH1	96	55.282	ENSXETG00000001212	rnaseh1	100	57.627	Xenopus_tropicalis
ENSBTAG00000016235	RNASEH1	91	45.098	ENSXETG00000030371	-	100	57.627	Xenopus_tropicalis
ENSBTAG00000016235	RNASEH1	91	55.515	ENSXMAG00000002357	rnaseh1	89	56.226	Xiphophorus_maculatus