EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000016328 (Gene tree)
Gene ID: 618226
Gene Symbol: SFPQ
Alias: -
Full Name: Bos taurus splicing factor proline and glutamine rich (SFPQ)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 13591 bases
Position: chr3:110557888-110571478
Accession: NM_001206291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000060140	RRM_1	PF00076.22	3.8e-30	1	2
ENSBTAP00000060140	RRM_1	PF00076.22	3.8e-30	2	2
ENSBTAP00000021719	RRM_1	PF00076.22	4.4e-30	1	2
ENSBTAP00000021719	RRM_1	PF00076.22	4.4e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000080233	-	2169	XM_005204863	ENSBTAP00000060140	669 (aa)	XP_005204920	UPI000383F383
ENSBTAT00000021719	-	2792	-	ENSBTAP00000021719	707 (aa)	XP_005204919	E1BQ37

Gene Model

Click here to download ENSBTAG00000016328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000016328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000016328	SFPQ	55	68.564	ENSBTAG00000003934	PSPC1	90	58.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000016328	SFPQ	100	96.901	ENSG00000116560	SFPQ	100	100.000	Homo_sapiens
ENSBTAG00000016328	SFPQ	61	74.596	ENSAPOG00000024257	sfpq	62	74.376	Acanthochromis_polyacanthus
ENSBTAG00000016328	SFPQ	62	100.000	ENSAMEG00000000815	SFPQ	100	100.000	Ailuropoda_melanoleuca
ENSBTAG00000016328	SFPQ	80	61.092	ENSACIG00000000905	sfpq	72	70.481	Amphilophus_citrinellus
ENSBTAG00000016328	SFPQ	61	74.246	ENSAOCG00000002889	sfpq	61	73.696	Amphiprion_ocellaris
ENSBTAG00000016328	SFPQ	61	74.246	ENSAPEG00000016556	sfpq	61	73.696	Amphiprion_percula
ENSBTAG00000016328	SFPQ	74	68.130	ENSATEG00000002981	sfpq	67	76.082	Anabas_testudineus
ENSBTAG00000016328	SFPQ	93	94.340	ENSANAG00000027438	-	77	94.340	Aotus_nancymaae
ENSBTAG00000016328	SFPQ	50	75.424	ENSANAG00000021268	-	100	74.359	Aotus_nancymaae
ENSBTAG00000016328	SFPQ	50	76.000	ENSANAG00000037798	-	99	75.714	Aotus_nancymaae
ENSBTAG00000016328	SFPQ	63	72.973	ENSACLG00000022332	sfpq	63	73.529	Astatotilapia_calliptera
ENSBTAG00000016328	SFPQ	62	69.841	ENSAMXG00000011538	sfpq	65	72.273	Astyanax_mexicanus
ENSBTAG00000016328	SFPQ	100	96.479	ENSCJAG00000001431	SFPQ	100	96.479	Callithrix_jacchus
ENSBTAG00000016328	SFPQ	85	83.721	ENSCAFG00000017608	-	96	80.645	Canis_familiaris
ENSBTAG00000016328	SFPQ	100	92.079	ENSCAFG00000003595	-	100	92.079	Canis_familiaris
ENSBTAG00000016328	SFPQ	85	84.359	ENSCAFG00000018271	-	66	92.971	Canis_familiaris
ENSBTAG00000016328	SFPQ	85	84.219	ENSCAFG00020004881	-	66	92.971	Canis_lupus_dingo
ENSBTAG00000016328	SFPQ	50	90.883	ENSCAFG00020010702	-	100	90.883	Canis_lupus_dingo
ENSBTAG00000016328	SFPQ	100	99.297	ENSCHIG00000023097	SFPQ	100	99.297	Capra_hircus
ENSBTAG00000016328	SFPQ	50	100.000	ENSTSYG00000037120	-	100	100.000	Carlito_syrichta
ENSBTAG00000016328	SFPQ	50	91.168	ENSCPOG00000015018	-	100	88.705	Cavia_porcellus
ENSBTAG00000016328	SFPQ	100	96.479	ENSCCAG00000029361	-	100	96.479	Cebus_capucinus
ENSBTAG00000016328	SFPQ	68	73.931	ENSCATG00000032664	-	67	74.286	Cercocebus_atys
ENSBTAG00000016328	SFPQ	63	96.698	ENSCATG00000036179	-	62	96.927	Cercocebus_atys
ENSBTAG00000016328	SFPQ	50	100.000	ENSCLAG00000009583	-	100	100.000	Chinchilla_lanigera
ENSBTAG00000016328	SFPQ	100	96.906	ENSCSAG00000001082	SFPQ	100	96.906	Chlorocebus_sabaeus
ENSBTAG00000016328	SFPQ	54	95.263	ENSCHOG00000009131	SFPQ	100	95.263	Choloepus_hoffmanni
ENSBTAG00000016328	SFPQ	63	92.428	ENSCPBG00000018674	SFPQ	69	92.793	Chrysemys_picta_bellii
ENSBTAG00000016328	SFPQ	50	100.000	ENSCANG00000028087	-	100	100.000	Colobus_angolensis_palliatus
ENSBTAG00000016328	SFPQ	85	91.181	ENSCGRG00001011698	Sfpq	96	89.280	Cricetulus_griseus_chok1gshd
ENSBTAG00000016328	SFPQ	61	99.536	ENSCGRG00000010128	Sfpq	95	99.536	Cricetulus_griseus_crigri
ENSBTAG00000016328	SFPQ	99	55.804	ENSCSEG00000007852	sfpq	66	73.165	Cynoglossus_semilaevis
ENSBTAG00000016328	SFPQ	60	70.023	ENSCVAG00000019538	sfpq	64	66.901	Cyprinodon_variegatus
ENSBTAG00000016328	SFPQ	60	74.065	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSBTAG00000016328	SFPQ	100	96.208	ENSDNOG00000049454	SFPQ	100	96.208	Dasypus_novemcinctus
ENSBTAG00000016328	SFPQ	100	96.469	ENSDORG00000008109	Sfpq	100	96.469	Dipodomys_ordii
ENSBTAG00000016328	SFPQ	69	92.807	ENSETEG00000001095	SFPQ	67	92.807	Echinops_telfairi
ENSBTAG00000016328	SFPQ	100	98.169	ENSEASG00005012012	SFPQ	100	98.169	Equus_asinus_asinus
ENSBTAG00000016328	SFPQ	100	98.169	ENSECAG00000000642	SFPQ	100	98.169	Equus_caballus
ENSBTAG00000016328	SFPQ	61	72.454	ENSELUG00000023145	sfpq	66	71.462	Esox_lucius
ENSBTAG00000016328	SFPQ	100	98.303	ENSFCAG00000042862	SFPQ	100	98.303	Felis_catus
ENSBTAG00000016328	SFPQ	50	94.587	ENSFALG00000000731	SFPQ	100	94.587	Ficedula_albicollis
ENSBTAG00000016328	SFPQ	50	90.598	ENSFDAG00000017723	-	100	90.935	Fukomys_damarensis
ENSBTAG00000016328	SFPQ	61	73.782	ENSGMOG00000011957	sfpq	65	73.782	Gadus_morhua
ENSBTAG00000016328	SFPQ	61	74.943	ENSGMOG00000011950	SFPQ	74	75.000	Gadus_morhua
ENSBTAG00000016328	SFPQ	62	94.292	ENSGALG00000002514	SFPQ	68	94.292	Gallus_gallus
ENSBTAG00000016328	SFPQ	92	53.323	ENSGAFG00000014571	sfpq	57	77.914	Gambusia_affinis
ENSBTAG00000016328	SFPQ	77	64.632	ENSGACG00000002034	sfpq	68	74.654	Gasterosteus_aculeatus
ENSBTAG00000016328	SFPQ	75	99.538	ENSGGOG00000026354	SFPQ	100	100.000	Gorilla_gorilla
ENSBTAG00000016328	SFPQ	63	72.973	ENSHBUG00000016818	sfpq	63	73.529	Haplochromis_burtoni
ENSBTAG00000016328	SFPQ	100	95.070	ENSHGLG00000012001	SFPQ	100	95.070	Heterocephalus_glaber_female
ENSBTAG00000016328	SFPQ	50	100.000	ENSHGLG00100004136	-	100	100.000	Heterocephalus_glaber_male
ENSBTAG00000016328	SFPQ	63	73.214	ENSHCOG00000008612	sfpq	58	72.912	Hippocampus_comes
ENSBTAG00000016328	SFPQ	63	70.000	ENSIPUG00000013076	SFPQ	73	72.769	Ictalurus_punctatus
ENSBTAG00000016328	SFPQ	50	100.000	ENSSTOG00000014004	-	100	100.000	Ictidomys_tridecemlineatus
ENSBTAG00000016328	SFPQ	96	90.602	ENSJJAG00000015633	Sfpq	96	89.574	Jaculus_jaculus
ENSBTAG00000016328	SFPQ	62	69.725	ENSKMAG00000000238	sfpq	54	70.805	Kryptolebias_marmoratus
ENSBTAG00000016328	SFPQ	61	76.027	ENSLACG00000014728	SFPQ	70	80.093	Latimeria_chalumnae
ENSBTAG00000016328	SFPQ	89	61.824	ENSLOCG00000001067	sfpq	69	80.711	Lepisosteus_oculatus
ENSBTAG00000016328	SFPQ	68	99.380	ENSLAFG00000015951	SFPQ	75	94.835	Loxodonta_africana
ENSBTAG00000016328	SFPQ	100	96.901	ENSMFAG00000000797	SFPQ	100	96.901	Macaca_fascicularis
ENSBTAG00000016328	SFPQ	100	96.761	ENSMMUG00000019154	SFPQ	100	96.761	Macaca_mulatta
ENSBTAG00000016328	SFPQ	100	97.042	ENSMNEG00000038895	SFPQ	100	97.042	Macaca_nemestrina
ENSBTAG00000016328	SFPQ	50	96.866	ENSMLEG00000010643	-	100	96.866	Mandrillus_leucophaeus
ENSBTAG00000016328	SFPQ	75	67.701	ENSMAMG00000007875	sfpq	66	77.726	Mastacembelus_armatus
ENSBTAG00000016328	SFPQ	96	55.240	ENSMZEG00005026091	sfpq	64	73.529	Maylandia_zebra
ENSBTAG00000016328	SFPQ	54	91.049	ENSMGAG00000004237	SFPQ	100	91.049	Meleagris_gallopavo
ENSBTAG00000016328	SFPQ	68	98.745	ENSMAUG00000006402	Sfpq	96	88.840	Mesocricetus_auratus
ENSBTAG00000016328	SFPQ	100	96.479	ENSMICG00000027265	SFPQ	100	96.479	Microcebus_murinus
ENSBTAG00000016328	SFPQ	68	95.021	ENSMOCG00000019075	Sfpq	99	95.021	Microtus_ochrogaster
ENSBTAG00000016328	SFPQ	81	62.414	ENSMMOG00000001074	sfpq	65	74.419	Mola_mola
ENSBTAG00000016328	SFPQ	63	96.188	ENSMODG00000017937	SFPQ	65	96.372	Monodelphis_domestica
ENSBTAG00000016328	SFPQ	61	74.884	ENSMALG00000010381	sfpq	64	75.389	Monopterus_albus
ENSBTAG00000016328	SFPQ	68	98.954	MGP_CAROLIEiJ_G0026487	Sfpq	69	98.347	Mus_caroli
ENSBTAG00000016328	SFPQ	68	98.954	ENSMUSG00000028820	Sfpq	69	98.347	Mus_musculus
ENSBTAG00000016328	SFPQ	85	90.803	MGP_PahariEiJ_G0028818	Sfpq	69	98.347	Mus_pahari
ENSBTAG00000016328	SFPQ	68	98.954	MGP_SPRETEiJ_G0027466	Sfpq	69	98.347	Mus_spretus
ENSBTAG00000016328	SFPQ	64	97.111	ENSMLUG00000027090	SFPQ	100	97.111	Myotis_lucifugus
ENSBTAG00000016328	SFPQ	68	98.763	ENSNGAG00000000888	Sfpq	69	98.351	Nannospalax_galili
ENSBTAG00000016328	SFPQ	98	55.731	ENSNBRG00000017479	sfpq	64	73.756	Neolamprologus_brichardi
ENSBTAG00000016328	SFPQ	50	100.000	ENSNLEG00000035521	-	100	100.000	Nomascus_leucogenys
ENSBTAG00000016328	SFPQ	67	95.556	ENSMEUG00000014082	SFPQ	68	95.556	Notamacropus_eugenii
ENSBTAG00000016328	SFPQ	72	94.094	ENSOPRG00000013696	SFPQ	66	99.772	Ochotona_princeps
ENSBTAG00000016328	SFPQ	65	87.879	ENSODEG00000005485	SFPQ	86	87.021	Octodon_degus
ENSBTAG00000016328	SFPQ	63	74.099	ENSONIG00000017737	sfpq	63	74.661	Oreochromis_niloticus
ENSBTAG00000016328	SFPQ	50	97.436	ENSOANG00000008789	-	100	97.436	Ornithorhynchus_anatinus
ENSBTAG00000016328	SFPQ	72	89.768	ENSOCUG00000001877	SFPQ	86	100.000	Oryctolagus_cuniculus
ENSBTAG00000016328	SFPQ	72	65.422	ENSORLG00000007459	sfpq	57	72.158	Oryzias_latipes
ENSBTAG00000016328	SFPQ	72	65.226	ENSORLG00015002131	sfpq	58	71.494	Oryzias_latipes_hsok
ENSBTAG00000016328	SFPQ	99	52.480	ENSOMEG00000018020	sfpq	56	71.926	Oryzias_melastigma
ENSBTAG00000016328	SFPQ	75	97.921	ENSOGAG00000027710	SFPQ	100	97.921	Otolemur_garnettii
ENSBTAG00000016328	SFPQ	66	100.000	ENSOARG00000019439	SFPQ	71	100.000	Ovis_aries
ENSBTAG00000016328	SFPQ	50	99.716	ENSPPRG00000015478	-	100	99.716	Panthera_pardus
ENSBTAG00000016328	SFPQ	50	100.000	ENSPTIG00000007710	-	100	100.000	Panthera_tigris_altaica
ENSBTAG00000016328	SFPQ	68	93.802	ENSPTRG00000000518	SFPQ	67	93.802	Pan_troglodytes
ENSBTAG00000016328	SFPQ	100	81.780	ENSPANG00000005380	SFPQ	100	81.780	Papio_anubis
ENSBTAG00000016328	SFPQ	81	62.988	ENSPKIG00000023035	sfpq	73	79.263	Paramormyrops_kingsleyae
ENSBTAG00000016328	SFPQ	61	94.664	ENSPSIG00000011494	SFPQ	100	94.664	Pelodiscus_sinensis
ENSBTAG00000016328	SFPQ	60	69.014	ENSPMGG00000023883	sfpq	58	81.115	Periophthalmus_magnuspinnatus
ENSBTAG00000016328	SFPQ	67	98.726	ENSPEMG00000009794	Sfpq	97	98.726	Peromyscus_maniculatus_bairdii
ENSBTAG00000016328	SFPQ	63	95.964	ENSPCIG00000000923	SFPQ	70	93.673	Phascolarctos_cinereus
ENSBTAG00000016328	SFPQ	76	59.571	ENSPFOG00000003127	sfpq	71	68.591	Poecilia_formosa
ENSBTAG00000016328	SFPQ	100	96.901	ENSPPYG00000001560	SFPQ	100	96.901	Pongo_abelii
ENSBTAG00000016328	SFPQ	60	98.834	ENSPCAG00000006164	SFPQ	64	98.834	Procavia_capensis
ENSBTAG00000016328	SFPQ	100	96.338	ENSPCOG00000027127	SFPQ	100	96.338	Propithecus_coquereli
ENSBTAG00000016328	SFPQ	100	95.474	ENSPVAG00000001865	SFPQ	100	95.474	Pteropus_vampyrus
ENSBTAG00000016328	SFPQ	63	72.072	ENSPNYG00000007494	sfpq	62	73.529	Pundamilia_nyererei
ENSBTAG00000016328	SFPQ	74	64.706	ENSPNAG00000002128	sfpq	73	73.198	Pygocentrus_nattereri
ENSBTAG00000016328	SFPQ	68	98.954	ENSRNOG00000058461	Sfpq	70	98.347	Rattus_norvegicus
ENSBTAG00000016328	SFPQ	99	72.663	ENSRBIG00000035286	SFPQ	100	100.000	Rhinopithecus_bieti
ENSBTAG00000016328	SFPQ	69	100.000	ENSRROG00000040992	SFPQ	100	100.000	Rhinopithecus_roxellana
ENSBTAG00000016328	SFPQ	50	100.000	ENSSBOG00000024972	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSBTAG00000016328	SFPQ	58	95.607	ENSSHAG00000016107	-	97	90.646	Sarcophilus_harrisii
ENSBTAG00000016328	SFPQ	50	91.453	ENSSHAG00000012312	-	100	90.883	Sarcophilus_harrisii
ENSBTAG00000016328	SFPQ	69	70.431	ENSSFOG00015009289	sfpq	79	78.005	Scleropages_formosus
ENSBTAG00000016328	SFPQ	61	77.083	ENSSMAG00000018201	sfpq	65	74.541	Scophthalmus_maximus
ENSBTAG00000016328	SFPQ	75	67.173	ENSSDUG00000008402	sfpq	65	78.291	Seriola_dumerili
ENSBTAG00000016328	SFPQ	98	56.440	ENSSLDG00000018917	sfpq	65	78.291	Seriola_lalandi_dorsalis
ENSBTAG00000016328	SFPQ	52	100.000	ENSSARG00000006409	SFPQ	100	100.000	Sorex_araneus
ENSBTAG00000016328	SFPQ	64	71.274	ENSSPAG00000016550	sfpq	64	75.057	Stegastes_partitus
ENSBTAG00000016328	SFPQ	100	97.737	ENSSSCG00000035690	SFPQ	100	97.737	Sus_scrofa
ENSBTAG00000016328	SFPQ	61	94.896	ENSTGUG00000001722	SFPQ	100	94.896	Taeniopygia_guttata
ENSBTAG00000016328	SFPQ	62	75.402	ENSTRUG00000003783	sfpq	62	76.092	Takifugu_rubripes
ENSBTAG00000016328	SFPQ	82	63.746	ENSTNIG00000011331	sfpq	72	76.027	Tetraodon_nigroviridis
ENSBTAG00000016328	SFPQ	85	92.000	ENSTTRG00000013930	SFPQ	96	89.853	Tursiops_truncatus
ENSBTAG00000016328	SFPQ	59	98.382	ENSUAMG00000026758	SFPQ	100	98.382	Ursus_americanus
ENSBTAG00000016328	SFPQ	50	97.151	ENSUMAG00000008056	-	100	97.151	Ursus_maritimus
ENSBTAG00000016328	SFPQ	66	90.315	ENSVPAG00000006960	-	67	90.315	Vicugna_pacos
ENSBTAG00000016328	SFPQ	50	88.889	ENSVVUG00000000874	-	100	88.889	Vulpes_vulpes
ENSBTAG00000016328	SFPQ	64	80.172	ENSXETG00000009682	sfpq	100	85.139	Xenopus_tropicalis