EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000016510 (Gene tree)
Gene ID: 512692
Gene Symbol: RRP7A
Alias: -
Full Name: ribosomal RNA processing 7 homolog A
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 7993 bases
Position: chr5:113436160-113444152
Accession: 512692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000066804	RRP7	PF12923.7	2.5e-32	1	1
ENSBTAP00000021948	RRM_1	PF00076.22	2.4e-05	1	1
ENSBTAP00000066804	RRM_1	PF00076.22	6.1e-05	1	1
ENSBTAP00000068862	RRM_1	PF00076.22	6.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000021948	RRP7A-203	513	-	ENSBTAP00000021948	170 (aa)	-	A8YXZ6
ENSBTAT00000084610	RRP7A-201	3502	-	ENSBTAP00000068862	253 (aa)	-	-
ENSBTAT00000074559	RRP7A-202	2299	XM_005207387	ENSBTAP00000066804	280 (aa)	XP_005207444	UPI00004F0B2F

Gene Model

Click here to download ENSBTAG00000016510's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000016510's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000016510	RRP7A	100	85.357	ENSG00000189306	RRP7A	94	87.121	Homo_sapiens
ENSBTAG00000016510	RRP7A	93	48.496	ENSAPOG00000021250	rrp7a	99	48.496	Acanthochromis_polyacanthus
ENSBTAG00000016510	RRP7A	100	85.357	ENSAMEG00000009503	RRP7A	96	85.874	Ailuropoda_melanoleuca
ENSBTAG00000016510	RRP7A	93	49.811	ENSACIG00000023067	rrp7a	94	48.120	Amphilophus_citrinellus
ENSBTAG00000016510	RRP7A	93	50.566	ENSAOCG00000004115	rrp7a	94	49.621	Amphiprion_ocellaris
ENSBTAG00000016510	RRP7A	93	50.566	ENSAPEG00000013688	rrp7a	98	50.000	Amphiprion_percula
ENSBTAG00000016510	RRP7A	93	48.679	ENSATEG00000009664	rrp7a	94	49.434	Anabas_testudineus
ENSBTAG00000016510	RRP7A	95	66.171	ENSACAG00000003579	RRP7A	96	66.171	Anolis_carolinensis
ENSBTAG00000016510	RRP7A	100	87.857	ENSANAG00000031200	RRP7A	96	88.104	Aotus_nancymaae
ENSBTAG00000016510	RRP7A	99	48.070	ENSACLG00000016790	rrp7a	94	50.943	Astatotilapia_calliptera
ENSBTAG00000016510	RRP7A	99	47.405	ENSAMXG00000007921	rrp7a	92	47.636	Astyanax_mexicanus
ENSBTAG00000016510	RRP7A	100	86.429	ENSCJAG00000009668	RRP7A	96	86.245	Callithrix_jacchus
ENSBTAG00000016510	RRP7A	96	85.130	ENSCAFG00000000965	RRP7	96	85.130	Canis_familiaris
ENSBTAG00000016510	RRP7A	96	85.130	ENSCAFG00020000251	RRP7A	96	85.130	Canis_lupus_dingo
ENSBTAG00000016510	RRP7A	100	96.429	ENSCHIG00000026787	RRP7A	100	96.429	Capra_hircus
ENSBTAG00000016510	RRP7A	100	85.714	ENSTSYG00000000198	RRP7A	96	85.502	Carlito_syrichta
ENSBTAG00000016510	RRP7A	91	85.156	ENSCAPG00000002325	RRP7A	98	85.156	Cavia_aperea
ENSBTAG00000016510	RRP7A	100	82.500	ENSCPOG00000030547	RRP7A	96	82.900	Cavia_porcellus
ENSBTAG00000016510	RRP7A	100	70.714	ENSCCAG00000021486	RRP7A	90	88.462	Cebus_capucinus
ENSBTAG00000016510	RRP7A	100	82.500	ENSCLAG00000016715	RRP7A	93	85.769	Chinchilla_lanigera
ENSBTAG00000016510	RRP7A	100	85.000	ENSCSAG00000005657	RRP7A	96	85.502	Chlorocebus_sabaeus
ENSBTAG00000016510	RRP7A	100	69.504	ENSCPBG00000021814	RRP7A	96	70.741	Chrysemys_picta_bellii
ENSBTAG00000016510	RRP7A	88	40.157	ENSCSAVG00000002555	-	85	43.556	Ciona_savignyi
ENSBTAG00000016510	RRP7A	81	80.531	ENSCGRG00001005713	-	99	80.531	Cricetulus_griseus_chok1gshd
ENSBTAG00000016510	RRP7A	89	68.421	ENSCGRG00001021873	-	93	81.818	Cricetulus_griseus_chok1gshd
ENSBTAG00000016510	RRP7A	100	78.214	ENSCGRG00000009567	-	95	79.775	Cricetulus_griseus_crigri
ENSBTAG00000016510	RRP7A	99	73.285	ENSCGRG00000000552	-	95	75.281	Cricetulus_griseus_crigri
ENSBTAG00000016510	RRP7A	91	73.725	ENSCGRG00000000540	-	100	73.725	Cricetulus_griseus_crigri
ENSBTAG00000016510	RRP7A	93	51.136	ENSCSEG00000007185	rrp7a	94	51.136	Cynoglossus_semilaevis
ENSBTAG00000016510	RRP7A	93	49.627	ENSCVAG00000004349	rrp7a	94	50.566	Cyprinodon_variegatus
ENSBTAG00000016510	RRP7A	93	45.489	ENSDARG00000098934	rrp7a	95	45.489	Danio_rerio
ENSBTAG00000016510	RRP7A	100	83.571	ENSDNOG00000037442	RRP7A	88	84.328	Dasypus_novemcinctus
ENSBTAG00000016510	RRP7A	100	83.214	ENSDORG00000016138	Rrp7a	95	84.906	Dipodomys_ordii
ENSBTAG00000016510	RRP7A	93	35.556	FBgn0031764	CG9107	99	35.556	Drosophila_melanogaster
ENSBTAG00000016510	RRP7A	91	84.314	ENSETEG00000018025	RRP7A	100	84.314	Echinops_telfairi
ENSBTAG00000016510	RRP7A	93	47.148	ENSEBUG00000010231	rrp7a	90	47.148	Eptatretus_burgeri
ENSBTAG00000016510	RRP7A	100	86.786	ENSEASG00005000804	RRP7A	96	88.060	Equus_asinus_asinus
ENSBTAG00000016510	RRP7A	100	87.143	ENSECAG00000015168	RRP7	96	88.433	Equus_caballus
ENSBTAG00000016510	RRP7A	93	48.106	ENSELUG00000009036	rrp7a	94	48.864	Esox_lucius
ENSBTAG00000016510	RRP7A	100	86.071	ENSFCAG00000033258	RRP7A	75	86.940	Felis_catus
ENSBTAG00000016510	RRP7A	91	66.926	ENSFALG00000011635	RRP7A	87	66.795	Ficedula_albicollis
ENSBTAG00000016510	RRP7A	99	83.871	ENSFDAG00000001321	RRP7A	96	84.387	Fukomys_damarensis
ENSBTAG00000016510	RRP7A	100	47.902	ENSFHEG00000006098	rrp7a	90	49.811	Fundulus_heteroclitus
ENSBTAG00000016510	RRP7A	93	48.289	ENSGMOG00000006218	rrp7a	98	48.289	Gadus_morhua
ENSBTAG00000016510	RRP7A	97	65.693	ENSGALG00000011866	RRP7A	95	67.557	Gallus_gallus
ENSBTAG00000016510	RRP7A	100	47.059	ENSGAFG00000017459	rrp7a	94	48.689	Gambusia_affinis
ENSBTAG00000016510	RRP7A	93	50.936	ENSGACG00000007212	rrp7a	98	50.936	Gasterosteus_aculeatus
ENSBTAG00000016510	RRP7A	100	69.149	ENSGAGG00000014621	RRP7A	96	70.741	Gopherus_agassizii
ENSBTAG00000016510	RRP7A	100	83.929	ENSGGOG00000014957	RRP7A	94	85.227	Gorilla_gorilla
ENSBTAG00000016510	RRP7A	99	48.070	ENSHBUG00000021788	rrp7a	94	50.943	Haplochromis_burtoni
ENSBTAG00000016510	RRP7A	100	81.979	ENSHGLG00000015706	RRP7A	93	84.091	Heterocephalus_glaber_female
ENSBTAG00000016510	RRP7A	100	79.078	ENSHGLG00100009556	-	96	78.889	Heterocephalus_glaber_male
ENSBTAG00000016510	RRP7A	96	80.297	ENSHGLG00100008187	-	97	80.297	Heterocephalus_glaber_male
ENSBTAG00000016510	RRP7A	93	49.057	ENSHCOG00000005813	rrp7a	82	49.434	Hippocampus_comes
ENSBTAG00000016510	RRP7A	97	48.375	ENSIPUG00000000556	rrp7a	94	50.000	Ictalurus_punctatus
ENSBTAG00000016510	RRP7A	100	84.286	ENSSTOG00000003111	RRP7A	95	85.393	Ictidomys_tridecemlineatus
ENSBTAG00000016510	RRP7A	100	81.786	ENSJJAG00000019486	Rrp7a	96	81.784	Jaculus_jaculus
ENSBTAG00000016510	RRP7A	93	50.566	ENSKMAG00000013819	rrp7a	94	50.566	Kryptolebias_marmoratus
ENSBTAG00000016510	RRP7A	95	61.940	ENSLACG00000002670	RRP7A	98	61.940	Latimeria_chalumnae
ENSBTAG00000016510	RRP7A	100	85.357	ENSLAFG00000012447	RRP7A	96	85.502	Loxodonta_africana
ENSBTAG00000016510	RRP7A	100	86.071	ENSMFAG00000042855	RRP7A	95	86.517	Macaca_fascicularis
ENSBTAG00000016510	RRP7A	100	78.571	ENSMFAG00000041664	-	96	78.439	Macaca_fascicularis
ENSBTAG00000016510	RRP7A	100	81.071	ENSMMUG00000010193	-	96	81.041	Macaca_mulatta
ENSBTAG00000016510	RRP7A	100	73.571	ENSMMUG00000009716	RRP7A	95	73.408	Macaca_mulatta
ENSBTAG00000016510	RRP7A	100	85.714	ENSMNEG00000033705	RRP7A	95	86.142	Macaca_nemestrina
ENSBTAG00000016510	RRP7A	99	74.643	ENSMLEG00000040230	RRP7A	98	77.132	Mandrillus_leucophaeus
ENSBTAG00000016510	RRP7A	93	51.698	ENSMAMG00000009125	rrp7a	94	52.453	Mastacembelus_armatus
ENSBTAG00000016510	RRP7A	99	48.070	ENSMZEG00005005197	rrp7a	94	50.943	Maylandia_zebra
ENSBTAG00000016510	RRP7A	91	68.217	ENSMGAG00000011980	RRP7A	100	68.217	Meleagris_gallopavo
ENSBTAG00000016510	RRP7A	100	88.571	ENSMICG00000041800	RRP7A	95	89.139	Microcebus_murinus
ENSBTAG00000016510	RRP7A	93	48.485	ENSMMOG00000004976	rrp7a	94	49.242	Mola_mola
ENSBTAG00000016510	RRP7A	100	68.070	ENSMODG00000006914	RRP7A	95	70.480	Monodelphis_domestica
ENSBTAG00000016510	RRP7A	93	50.379	ENSMALG00000001933	rrp7a	94	51.321	Monopterus_albus
ENSBTAG00000016510	RRP7A	100	79.643	MGP_CAROLIEiJ_G0020092	Rrp7a	95	81.648	Mus_caroli
ENSBTAG00000016510	RRP7A	100	79.643	ENSMUSG00000018040	Rrp7a	98	98.000	Mus_musculus
ENSBTAG00000016510	RRP7A	100	79.286	MGP_PahariEiJ_G0020099	Rrp7a	95	81.273	Mus_pahari
ENSBTAG00000016510	RRP7A	100	79.286	MGP_SPRETEiJ_G0020990	Rrp7a	95	81.273	Mus_spretus
ENSBTAG00000016510	RRP7A	100	85.357	ENSMPUG00000016315	RRP7A	95	86.142	Mustela_putorius_furo
ENSBTAG00000016510	RRP7A	100	87.500	ENSMLUG00000012404	RRP7A	96	87.361	Myotis_lucifugus
ENSBTAG00000016510	RRP7A	100	83.214	ENSNGAG00000010039	Rrp7a	96	83.582	Nannospalax_galili
ENSBTAG00000016510	RRP7A	98	49.110	ENSNBRG00000001824	rrp7a	94	52.075	Neolamprologus_brichardi
ENSBTAG00000016510	RRP7A	100	85.357	ENSNLEG00000036258	RRP7A	95	85.768	Nomascus_leucogenys
ENSBTAG00000016510	RRP7A	100	83.929	ENSODEG00000015126	RRP7A	95	85.019	Octodon_degus
ENSBTAG00000016510	RRP7A	93	50.189	ENSONIG00000008364	rrp7a	93	51.321	Oreochromis_niloticus
ENSBTAG00000016510	RRP7A	82	64.224	ENSOANG00000015007	RRP7A	85	64.224	Ornithorhynchus_anatinus
ENSBTAG00000016510	RRP7A	99	78.136	ENSOCUG00000027434	RRP7A	93	81.081	Oryctolagus_cuniculus
ENSBTAG00000016510	RRP7A	93	47.727	ENSORLG00000014826	rrp7a	97	47.445	Oryzias_latipes
ENSBTAG00000016510	RRP7A	93	47.925	ENSORLG00020006078	rrp7a	97	47.445	Oryzias_latipes_hni
ENSBTAG00000016510	RRP7A	95	47.080	ENSORLG00015018190	rrp7a	97	46.350	Oryzias_latipes_hsok
ENSBTAG00000016510	RRP7A	87	48.790	ENSOMEG00000007090	rrp7a	95	47.925	Oryzias_melastigma
ENSBTAG00000016510	RRP7A	100	86.071	ENSOGAG00000002857	RRP7A	96	86.567	Otolemur_garnettii
ENSBTAG00000016510	RRP7A	100	95.357	ENSOARG00000018986	RRP7A	96	95.539	Ovis_aries
ENSBTAG00000016510	RRP7A	76	87.264	ENSPPAG00000021416	-	77	87.264	Pan_paniscus
ENSBTAG00000016510	RRP7A	75	76.555	ENSPPAG00000029825	-	85	76.555	Pan_paniscus
ENSBTAG00000016510	RRP7A	100	86.071	ENSPPRG00000022185	RRP7A	96	86.940	Panthera_pardus
ENSBTAG00000016510	RRP7A	95	72.121	ENSPTIG00000020965	RRP7A	95	57.246	Panthera_tigris_altaica
ENSBTAG00000016510	RRP7A	89	80.263	ENSPTRG00000033935	-	91	80.576	Pan_troglodytes
ENSBTAG00000016510	RRP7A	100	81.071	ENSPANG00000032001	-	96	80.669	Papio_anubis
ENSBTAG00000016510	RRP7A	100	85.714	ENSPANG00000025354	-	95	86.142	Papio_anubis
ENSBTAG00000016510	RRP7A	93	50.752	ENSPKIG00000007209	rrp7a	81	50.752	Paramormyrops_kingsleyae
ENSBTAG00000016510	RRP7A	95	68.914	ENSPSIG00000007988	RRP7A	100	68.914	Pelodiscus_sinensis
ENSBTAG00000016510	RRP7A	91	42.692	ENSPMGG00000009485	rrp7a	90	42.085	Periophthalmus_magnuspinnatus
ENSBTAG00000016510	RRP7A	100	79.643	ENSPEMG00000022265	Rrp7a	95	81.648	Peromyscus_maniculatus_bairdii
ENSBTAG00000016510	RRP7A	92	51.923	ENSPMAG00000002823	rrp7a	94	51.923	Petromyzon_marinus
ENSBTAG00000016510	RRP7A	100	71.786	ENSPCIG00000026195	RRP7A	95	74.717	Phascolarctos_cinereus
ENSBTAG00000016510	RRP7A	93	48.881	ENSPFOG00000001042	rrp7a	94	49.057	Poecilia_formosa
ENSBTAG00000016510	RRP7A	59	52.874	ENSPLAG00000009537	rrp7a	72	53.488	Poecilia_latipinna
ENSBTAG00000016510	RRP7A	59	52.874	ENSPLAG00000010787	-	72	53.488	Poecilia_latipinna
ENSBTAG00000016510	RRP7A	93	49.254	ENSPMEG00000018204	rrp7a	94	49.434	Poecilia_mexicana
ENSBTAG00000016510	RRP7A	93	49.813	ENSPREG00000016492	rrp7a	94	50.000	Poecilia_reticulata
ENSBTAG00000016510	RRP7A	100	84.286	ENSPPYG00000011897	RRP7A	94	85.606	Pongo_abelii
ENSBTAG00000016510	RRP7A	100	87.500	ENSPCOG00000014018	RRP7A	95	88.679	Propithecus_coquereli
ENSBTAG00000016510	RRP7A	90	86.111	ENSPVAG00000003330	RRP7A	96	85.892	Pteropus_vampyrus
ENSBTAG00000016510	RRP7A	99	47.719	ENSPNYG00000020343	rrp7a	94	50.943	Pundamilia_nyererei
ENSBTAG00000016510	RRP7A	93	48.315	ENSPNAG00000014376	rrp7a	95	48.120	Pygocentrus_nattereri
ENSBTAG00000016510	RRP7A	100	80.000	ENSRNOG00000022896	Rrp7a	95	82.022	Rattus_norvegicus
ENSBTAG00000016510	RRP7A	100	76.950	ENSRBIG00000040358	RRP7A	96	75.646	Rhinopithecus_bieti
ENSBTAG00000016510	RRP7A	100	84.342	ENSRROG00000036754	RRP7A	96	84.444	Rhinopithecus_roxellana
ENSBTAG00000016510	RRP7A	100	85.714	ENSSBOG00000009234	RRP7A	96	85.502	Saimiri_boliviensis_boliviensis
ENSBTAG00000016510	RRP7A	74	76.812	ENSSHAG00000005715	RRP7A	99	76.812	Sarcophilus_harrisii
ENSBTAG00000016510	RRP7A	93	53.232	ENSSFOG00015012621	rrp7a	84	52.471	Scleropages_formosus
ENSBTAG00000016510	RRP7A	99	49.296	ENSSMAG00000004593	rrp7a	97	49.451	Scophthalmus_maximus
ENSBTAG00000016510	RRP7A	93	49.242	ENSSDUG00000016921	rrp7a	94	48.864	Seriola_dumerili
ENSBTAG00000016510	RRP7A	93	48.864	ENSSLDG00000024758	rrp7a	94	48.485	Seriola_lalandi_dorsalis
ENSBTAG00000016510	RRP7A	60	92.857	ENSSARG00000002133	-	66	92.857	Sorex_araneus
ENSBTAG00000016510	RRP7A	83	66.953	ENSSPUG00000005373	RRP7A	93	66.953	Sphenodon_punctatus
ENSBTAG00000016510	RRP7A	93	48.872	ENSSPAG00000016048	rrp7a	94	48.679	Stegastes_partitus
ENSBTAG00000016510	RRP7A	100	86.429	ENSSSCG00000033983	RRP7A	95	86.891	Sus_scrofa
ENSBTAG00000016510	RRP7A	91	66.926	ENSTGUG00000009647	RRP7A	100	66.926	Taeniopygia_guttata
ENSBTAG00000016510	RRP7A	99	46.996	ENSTRUG00000024726	rrp7a	95	49.064	Takifugu_rubripes
ENSBTAG00000016510	RRP7A	99	48.410	ENSTNIG00000010842	rrp7a	93	50.190	Tetraodon_nigroviridis
ENSBTAG00000016510	RRP7A	100	86.786	ENSUAMG00000026180	RRP7A	96	86.989	Ursus_americanus
ENSBTAG00000016510	RRP7A	100	83.214	ENSUMAG00000020394	RRP7A	96	83.271	Ursus_maritimus
ENSBTAG00000016510	RRP7A	99	82.671	ENSVVUG00000002248	-	65	87.109	Vulpes_vulpes
ENSBTAG00000016510	RRP7A	93	59.004	ENSXETG00000013414	rrp7a	95	59.004	Xenopus_tropicalis
ENSBTAG00000016510	RRP7A	93	48.708	ENSXCOG00000015955	rrp7a	94	48.881	Xiphophorus_couchianus
ENSBTAG00000016510	RRP7A	100	47.079	ENSXMAG00000006165	rrp7a	94	49.438	Xiphophorus_maculatus