EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000016716 (Gene tree)
Gene ID: 510956
Gene Symbol: RRS1
Alias: -
Full Name: Bos taurus ribosome biogenesis regulator homolog (RRS1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 1762 bases
Position: chr14:30687060-30688821
Accession: NM_001075481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000022217	RRS1	PF04939.12	1.2e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000022217	-	1762	-	ENSBTAP00000022217	365 (aa)	-	F1MPT7

Gene Model

Click here to download ENSBTAG00000016716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000016716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000016716	RRS1	100	93.973	ENSG00000179041	RRS1	100	93.973	Homo_sapiens
ENSBTAG00000016716	RRS1	88	66.044	ENSATEG00000011743	rrs1	95	64.985	Anabas_testudineus
ENSBTAG00000016716	RRS1	100	93.425	ENSANAG00000018116	RRS1	100	93.425	Aotus_nancymaae
ENSBTAG00000016716	RRS1	84	65.902	ENSAMXG00000037893	rrs1	86	63.554	Astyanax_mexicanus
ENSBTAG00000016716	RRS1	70	44.528	WBGene00007617	rrbs-1	78	44.528	Caenorhabditis_elegans
ENSBTAG00000016716	RRS1	100	93.425	ENSCJAG00000022034	RRS1	100	93.425	Callithrix_jacchus
ENSBTAG00000016716	RRS1	100	93.973	ENSCAFG00000007313	RRS1	100	93.973	Canis_familiaris
ENSBTAG00000016716	RRS1	100	93.973	ENSCAFG00020016049	-	100	93.973	Canis_lupus_dingo
ENSBTAG00000016716	RRS1	100	93.973	ENSCAFG00020020365	-	100	93.973	Canis_lupus_dingo
ENSBTAG00000016716	RRS1	100	98.356	ENSCHIG00000009141	RRS1	100	98.356	Capra_hircus
ENSBTAG00000016716	RRS1	96	87.106	ENSCPOG00000000647	RRS1	100	87.397	Cavia_porcellus
ENSBTAG00000016716	RRS1	100	92.877	ENSCCAG00000032186	RRS1	100	92.877	Cebus_capucinus
ENSBTAG00000016716	RRS1	100	93.973	ENSCATG00000016944	RRS1	100	93.973	Cercocebus_atys
ENSBTAG00000016716	RRS1	100	93.151	ENSCSAG00000018552	RRS1	100	93.151	Chlorocebus_sabaeus
ENSBTAG00000016716	RRS1	87	95.268	ENSCHOG00000002455	RRS1	100	93.973	Choloepus_hoffmanni
ENSBTAG00000016716	RRS1	87	65.644	ENSCPBG00000021374	RRS1	96	64.118	Chrysemys_picta_bellii
ENSBTAG00000016716	RRS1	86	47.152	ENSCING00000002177	-	97	47.152	Ciona_intestinalis
ENSBTAG00000016716	RRS1	85	47.468	ENSCSAVG00000011819	-	96	47.468	Ciona_savignyi
ENSBTAG00000016716	RRS1	100	93.699	ENSCANG00000012718	RRS1	100	93.699	Colobus_angolensis_palliatus
ENSBTAG00000016716	RRS1	100	87.945	ENSCGRG00001002391	-	100	87.945	Cricetulus_griseus_chok1gshd
ENSBTAG00000016716	RRS1	97	84.225	ENSCGRG00001015575	-	99	83.662	Cricetulus_griseus_chok1gshd
ENSBTAG00000016716	RRS1	82	55.482	ENSCSEG00000014750	rrs1	93	54.006	Cynoglossus_semilaevis
ENSBTAG00000016716	RRS1	84	56.026	ENSCVAG00000017878	rrs1	98	52.186	Cyprinodon_variegatus
ENSBTAG00000016716	RRS1	82	66.333	ENSDARG00000003941	rrs1	92	64.688	Danio_rerio
ENSBTAG00000016716	RRS1	100	92.603	ENSDNOG00000017900	RRS1	99	92.603	Dasypus_novemcinctus
ENSBTAG00000016716	RRS1	61	91.403	ENSDORG00000026331	Rrs1	100	87.732	Dipodomys_ordii
ENSBTAG00000016716	RRS1	88	40.290	FBgn0052409	CG32409	94	42.169	Drosophila_melanogaster
ENSBTAG00000016716	RRS1	55	89.055	ENSETEG00000000935	-	55	89.055	Echinops_telfairi
ENSBTAG00000016716	RRS1	84	52.922	ENSEBUG00000013506	rrs1	95	54.035	Eptatretus_burgeri
ENSBTAG00000016716	RRS1	100	95.342	ENSEASG00005001691	RRS1	100	95.342	Equus_asinus_asinus
ENSBTAG00000016716	RRS1	92	91.940	ENSECAG00000004492	RRS1	100	87.123	Equus_caballus
ENSBTAG00000016716	RRS1	100	90.411	ENSEEUG00000013719	RRS1	100	90.411	Erinaceus_europaeus
ENSBTAG00000016716	RRS1	100	93.425	ENSFCAG00000014332	RRS1	100	93.425	Felis_catus
ENSBTAG00000016716	RRS1	80	64.238	ENSGALG00000030890	RRS1	94	62.832	Gallus_gallus
ENSBTAG00000016716	RRS1	86	62.540	ENSGACG00000002969	rrs1	99	58.583	Gasterosteus_aculeatus
ENSBTAG00000016716	RRS1	87	64.526	ENSGAGG00000023718	RRS1	92	64.286	Gopherus_agassizii
ENSBTAG00000016716	RRS1	100	94.521	ENSGGOG00000026663	RRS1	100	94.521	Gorilla_gorilla
ENSBTAG00000016716	RRS1	100	89.863	ENSHGLG00000021423	RRS1	100	89.863	Heterocephalus_glaber_female
ENSBTAG00000016716	RRS1	100	89.863	ENSHGLG00100020640	RRS1	100	89.863	Heterocephalus_glaber_male
ENSBTAG00000016716	RRS1	98	61.732	ENSHCOG00000015358	rrs1	94	60.894	Hippocampus_comes
ENSBTAG00000016716	RRS1	82	65.101	ENSIPUG00000014412	rrs1	96	62.130	Ictalurus_punctatus
ENSBTAG00000016716	RRS1	100	92.877	ENSSTOG00000026310	RRS1	100	92.877	Ictidomys_tridecemlineatus
ENSBTAG00000016716	RRS1	76	81.362	ENSJJAG00000020395	-	100	71.038	Jaculus_jaculus
ENSBTAG00000016716	RRS1	84	90.584	ENSJJAG00000011507	-	100	88.556	Jaculus_jaculus
ENSBTAG00000016716	RRS1	94	59.357	ENSKMAG00000008238	rrs1	94	63.190	Kryptolebias_marmoratus
ENSBTAG00000016716	RRS1	85	66.774	ENSLACG00000004058	RRS1	99	65.350	Latimeria_chalumnae
ENSBTAG00000016716	RRS1	84	68.525	ENSLOCG00000017812	rrs1	95	66.769	Lepisosteus_oculatus
ENSBTAG00000016716	RRS1	87	95.584	ENSLAFG00000015405	RRS1	99	93.425	Loxodonta_africana
ENSBTAG00000016716	RRS1	100	93.425	ENSMFAG00000042747	RRS1	100	93.425	Macaca_fascicularis
ENSBTAG00000016716	RRS1	100	93.425	ENSMMUG00000000886	RRS1	100	93.425	Macaca_mulatta
ENSBTAG00000016716	RRS1	100	93.425	ENSMNEG00000011696	RRS1	100	93.425	Macaca_nemestrina
ENSBTAG00000016716	RRS1	100	93.973	ENSMLEG00000004794	RRS1	100	93.973	Mandrillus_leucophaeus
ENSBTAG00000016716	RRS1	82	66.445	ENSMZEG00005004349	RRS1	92	64.742	Maylandia_zebra
ENSBTAG00000016716	RRS1	100	88.767	ENSMAUG00000005392	Rrs1	100	88.767	Mesocricetus_auratus
ENSBTAG00000016716	RRS1	95	90.145	ENSMOCG00000015862	Rrs1	85	90.909	Microtus_ochrogaster
ENSBTAG00000016716	RRS1	89	79.448	ENSMODG00000024952	RRS1	99	75.603	Monodelphis_domestica
ENSBTAG00000016716	RRS1	100	88.493	MGP_CAROLIEiJ_G0013936	Rrs1	100	88.219	Mus_caroli
ENSBTAG00000016716	RRS1	100	88.767	ENSMUSG00000061024	Rrs1	100	88.767	Mus_musculus
ENSBTAG00000016716	RRS1	100	88.767	MGP_PahariEiJ_G0023883	Rrs1	100	88.767	Mus_pahari
ENSBTAG00000016716	RRS1	100	88.767	MGP_SPRETEiJ_G0014739	Rrs1	100	88.767	Mus_spretus
ENSBTAG00000016716	RRS1	100	92.603	ENSMPUG00000018626	RRS1	98	92.603	Mustela_putorius_furo
ENSBTAG00000016716	RRS1	100	90.685	ENSNGAG00000012904	Rrs1	100	90.685	Nannospalax_galili
ENSBTAG00000016716	RRS1	88	86.068	ENSNLEG00000027730	RRS1	96	92.177	Nomascus_leucogenys
ENSBTAG00000016716	RRS1	82	67.110	ENSONIG00000014187	rrs1	95	64.458	Oreochromis_niloticus
ENSBTAG00000016716	RRS1	90	72.424	ENSOANG00000012348	RRS1	98	69.251	Ornithorhynchus_anatinus
ENSBTAG00000016716	RRS1	95	91.329	ENSOCUG00000013490	RRS1	100	89.702	Oryctolagus_cuniculus
ENSBTAG00000016716	RRS1	86	55.556	ENSOMEG00000008525	rrs1	93	55.215	Oryzias_melastigma
ENSBTAG00000016716	RRS1	100	91.781	ENSOGAG00000001085	RRS1	100	91.781	Otolemur_garnettii
ENSBTAG00000016716	RRS1	100	92.877	ENSOARG00000017417	RRS1	98	92.877	Ovis_aries
ENSBTAG00000016716	RRS1	100	93.973	ENSPPAG00000024378	RRS1	100	93.973	Pan_paniscus
ENSBTAG00000016716	RRS1	100	93.699	ENSPPRG00000021408	RRS1	100	93.699	Panthera_pardus
ENSBTAG00000016716	RRS1	100	93.699	ENSPTRG00000030988	RRS1	100	93.699	Pan_troglodytes
ENSBTAG00000016716	RRS1	100	66.849	ENSPANG00000035974	RRS1	100	67.397	Papio_anubis
ENSBTAG00000016716	RRS1	82	66.667	ENSPKIG00000007953	rrs1	94	64.308	Paramormyrops_kingsleyae
ENSBTAG00000016716	RRS1	100	88.219	ENSPEMG00000014427	Rrs1	100	88.219	Peromyscus_maniculatus_bairdii
ENSBTAG00000016716	RRS1	82	60.535	ENSPMAG00000006513	rrs1	85	59.259	Petromyzon_marinus
ENSBTAG00000016716	RRS1	84	82.143	ENSPCIG00000026695	RRS1	100	76.902	Phascolarctos_cinereus
ENSBTAG00000016716	RRS1	82	67.559	ENSPFOG00000020722	rrs1	99	66.355	Poecilia_formosa
ENSBTAG00000016716	RRS1	83	57.049	ENSPREG00000019960	rrs1	98	52.717	Poecilia_reticulata
ENSBTAG00000016716	RRS1	81	94.613	ENSPPYG00000018637	RRS1	100	94.613	Pongo_abelii
ENSBTAG00000016716	RRS1	90	94.848	ENSPCAG00000009115	RRS1	100	93.973	Procavia_capensis
ENSBTAG00000016716	RRS1	80	66.781	ENSPNAG00000021707	rrs1	90	65.000	Pygocentrus_nattereri
ENSBTAG00000016716	RRS1	100	89.315	ENSRNOG00000007240	Rrs1	100	89.315	Rattus_norvegicus
ENSBTAG00000016716	RRS1	100	93.425	ENSRBIG00000009132	RRS1	100	93.425	Rhinopithecus_bieti
ENSBTAG00000016716	RRS1	100	93.425	ENSRROG00000013472	RRS1	100	93.425	Rhinopithecus_roxellana
ENSBTAG00000016716	RRS1	100	89.041	ENSSBOG00000012639	-	100	90.137	Saimiri_boliviensis_boliviensis
ENSBTAG00000016716	RRS1	100	89.041	ENSSBOG00000011006	-	100	88.767	Saimiri_boliviensis_boliviensis
ENSBTAG00000016716	RRS1	80	54.608	ENSSFOG00015015772	rrs1	89	53.943	Scleropages_formosus
ENSBTAG00000016716	RRS1	81	66.554	ENSSMAG00000015226	rrs1	98	60.108	Scophthalmus_maximus
ENSBTAG00000016716	RRS1	82	90.449	ENSSARG00000006976	RRS1	82	90.449	Sorex_araneus
ENSBTAG00000016716	RRS1	100	96.438	ENSSSCG00000006214	RRS1	100	96.438	Sus_scrofa
ENSBTAG00000016716	RRS1	87	62.696	ENSTRUG00000008796	rrs1	95	63.376	Takifugu_rubripes
ENSBTAG00000016716	RRS1	76	66.304	ENSTNIG00000004026	rrs1	97	64.955	Tetraodon_nigroviridis
ENSBTAG00000016716	RRS1	100	94.521	ENSTBEG00000014752	RRS1	100	94.521	Tupaia_belangeri
ENSBTAG00000016716	RRS1	100	94.795	ENSUAMG00000008502	RRS1	100	94.795	Ursus_americanus
ENSBTAG00000016716	RRS1	100	94.247	ENSVVUG00000018452	RRS1	100	94.247	Vulpes_vulpes
ENSBTAG00000016716	RRS1	82	67.224	ENSXCOG00000009809	rrs1	95	64.095	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	-	ISS	Process
GO:0000794	condensed nuclear chromosome	-	ISS	Component
GO:0005730	nucleolus	-	ISS	Component
GO:0007080	mitotic metaphase plate congression	-	ISS	Process
GO:0008097	5S rRNA binding	-	ISS	Function
GO:1901796	regulation of signal transduction by p53 class mediator	-	ISS	Process
GO:1902570	protein localization to nucleolus	-	ISS	Process