EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000016723 (Gene tree)
Gene ID: 100139952
Gene Symbol: GFI1
Alias: -
Full Name: Bos taurus growth factor independent 1 transcriptional repressor (GFI1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 10763 bases
Position: chr3:50945369-50956131
Accession: NM_001191312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000022231	zf-C2H2	PF00096.26	3.8e-27	1	6
ENSBTAP00000022231	zf-C2H2	PF00096.26	3.8e-27	2	6
ENSBTAP00000022231	zf-C2H2	PF00096.26	3.8e-27	3	6
ENSBTAP00000022231	zf-C2H2	PF00096.26	3.8e-27	4	6
ENSBTAP00000022231	zf-C2H2	PF00096.26	3.8e-27	5	6
ENSBTAP00000022231	zf-C2H2	PF00096.26	3.8e-27	6	6
ENSBTAP00000022231	zf-met	PF12874.7	4.6e-08	1	2
ENSBTAP00000022231	zf-met	PF12874.7	4.6e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000022231	-	2691	XM_005204252	ENSBTAP00000022231	420 (aa)	XP_005204309	F1MPJ9

Gene Model

Click here to download ENSBTAG00000016723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000016723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000016723	GFI1	56	43.421	ENSBTAG00000038322	-	74	43.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000016723	GFI1	100	92.180	ENSG00000162676	GFI1	100	92.180	Homo_sapiens
ENSBTAG00000016723	GFI1	100	63.023	ENSAPOG00000015189	gfi1ab	100	61.949	Acanthochromis_polyacanthus
ENSBTAG00000016723	GFI1	100	64.218	ENSACIG00000016354	gfi1ab	100	63.915	Amphilophus_citrinellus
ENSBTAG00000016723	GFI1	100	55.035	ENSAOCG00000008339	gfi1ab	100	53.828	Amphiprion_ocellaris
ENSBTAG00000016723	GFI1	100	63.721	ENSAPEG00000023870	gfi1ab	100	62.645	Amphiprion_percula
ENSBTAG00000016723	GFI1	100	60.993	ENSATEG00000009167	gfi1ab	89	60.520	Anabas_testudineus
ENSBTAG00000016723	GFI1	87	75.202	ENSAPLG00000015700	GFI1	99	75.202	Anas_platyrhynchos
ENSBTAG00000016723	GFI1	100	71.528	ENSACAG00000004498	GFI1	100	71.065	Anolis_carolinensis
ENSBTAG00000016723	GFI1	100	90.284	ENSANAG00000019656	GFI1	100	90.284	Aotus_nancymaae
ENSBTAG00000016723	GFI1	100	64.085	ENSACLG00000026458	gfi1ab	93	63.146	Astatotilapia_calliptera
ENSBTAG00000016723	GFI1	67	46.205	ENSAMXG00000015228	-	56	62.360	Astyanax_mexicanus
ENSBTAG00000016723	GFI1	100	60.941	ENSAMXG00000039600	gfi1ab	100	60.706	Astyanax_mexicanus
ENSBTAG00000016723	GFI1	100	89.810	ENSCJAG00000017609	GFI1	100	89.810	Callithrix_jacchus
ENSBTAG00000016723	GFI1	100	95.261	ENSCAFG00000020155	GFI1	100	95.261	Canis_familiaris
ENSBTAG00000016723	GFI1	100	95.261	ENSCAFG00020013371	GFI1	88	95.261	Canis_lupus_dingo
ENSBTAG00000016723	GFI1	100	99.286	ENSCHIG00000016135	GFI1	100	99.286	Capra_hircus
ENSBTAG00000016723	GFI1	100	89.786	ENSCPOG00000011727	GFI1	100	89.549	Cavia_porcellus
ENSBTAG00000016723	GFI1	100	90.758	ENSCCAG00000036072	GFI1	100	90.758	Cebus_capucinus
ENSBTAG00000016723	GFI1	100	91.943	ENSCATG00000037873	GFI1	100	91.943	Cercocebus_atys
ENSBTAG00000016723	GFI1	100	85.511	ENSCLAG00000005915	GFI1	100	83.372	Chinchilla_lanigera
ENSBTAG00000016723	GFI1	86	90.385	ENSCSAG00000001469	GFI1	100	90.385	Chlorocebus_sabaeus
ENSBTAG00000016723	GFI1	100	91.706	ENSCANG00000034077	GFI1	100	91.706	Colobus_angolensis_palliatus
ENSBTAG00000016723	GFI1	100	85.545	ENSCGRG00001015432	Gfi1	100	85.545	Cricetulus_griseus_chok1gshd
ENSBTAG00000016723	GFI1	100	58.782	ENSCSEG00000017729	GFI1	100	58.782	Cynoglossus_semilaevis
ENSBTAG00000016723	GFI1	100	62.207	ENSCVAG00000011828	gfi1ab	100	61.268	Cyprinodon_variegatus
ENSBTAG00000016723	GFI1	100	59.906	ENSCVAG00000004930	GFI1	100	60.798	Cyprinodon_variegatus
ENSBTAG00000016723	GFI1	100	64.789	ENSDARG00000044457	gfi1ab	100	62.989	Danio_rerio
ENSBTAG00000016723	GFI1	100	90.780	ENSDNOG00000000782	GFI1	97	91.962	Dasypus_novemcinctus
ENSBTAG00000016723	GFI1	100	92.435	ENSEASG00005015509	GFI1	86	92.199	Equus_asinus_asinus
ENSBTAG00000016723	GFI1	86	91.484	ENSECAG00000006647	GFI1	92	85.604	Equus_caballus
ENSBTAG00000016723	GFI1	100	86.190	ENSEEUG00000000198	GFI1	100	85.476	Erinaceus_europaeus
ENSBTAG00000016723	GFI1	100	59.670	ENSELUG00000019033	GFI1	100	58.974	Esox_lucius
ENSBTAG00000016723	GFI1	100	63.341	ENSELUG00000003015	gfi1ab	99	63.109	Esox_lucius
ENSBTAG00000016723	GFI1	100	95.261	ENSFCAG00000005914	GFI1	100	95.261	Felis_catus
ENSBTAG00000016723	GFI1	100	58.756	ENSFHEG00000000341	GFI1	100	59.447	Fundulus_heteroclitus
ENSBTAG00000016723	GFI1	100	62.617	ENSFHEG00000010997	gfi1ab	100	61.682	Fundulus_heteroclitus
ENSBTAG00000016723	GFI1	100	62.175	ENSGMOG00000007737	gfi1ab	100	61.939	Gadus_morhua
ENSBTAG00000016723	GFI1	100	73.721	ENSGALG00000043650	GFI1	100	73.721	Gallus_gallus
ENSBTAG00000016723	GFI1	100	58.005	ENSGAFG00000018063	GFI1	100	56.125	Gambusia_affinis
ENSBTAG00000016723	GFI1	100	62.383	ENSGAFG00000016637	gfi1ab	100	60.187	Gambusia_affinis
ENSBTAG00000016723	GFI1	100	62.736	ENSGACG00000004257	gfi1ab	97	62.322	Gasterosteus_aculeatus
ENSBTAG00000016723	GFI1	100	92.180	ENSGGOG00000005320	GFI1	100	92.180	Gorilla_gorilla
ENSBTAG00000016723	GFI1	100	64.371	ENSHBUG00000011969	gfi1ab	100	63.357	Haplochromis_burtoni
ENSBTAG00000016723	GFI1	100	90.499	ENSHGLG00000008020	GFI1	100	90.499	Heterocephalus_glaber_female
ENSBTAG00000016723	GFI1	100	90.499	ENSHGLG00100000610	GFI1	100	90.499	Heterocephalus_glaber_male
ENSBTAG00000016723	GFI1	100	57.346	ENSHCOG00000019555	GFI1	84	89.247	Hippocampus_comes
ENSBTAG00000016723	GFI1	100	53.229	ENSHCOG00000008590	gfi1ab	100	51.542	Hippocampus_comes
ENSBTAG00000016723	GFI1	100	62.175	ENSIPUG00000010071	gfi1ab	87	61.772	Ictalurus_punctatus
ENSBTAG00000016723	GFI1	100	58.042	ENSIPUG00000013414	GFI1	100	58.275	Ictalurus_punctatus
ENSBTAG00000016723	GFI1	100	90.758	ENSSTOG00000014583	GFI1	100	90.758	Ictidomys_tridecemlineatus
ENSBTAG00000016723	GFI1	100	63.529	ENSKMAG00000003810	gfi1ab	100	62.824	Kryptolebias_marmoratus
ENSBTAG00000016723	GFI1	100	61.628	ENSLBEG00000027776	gfi1ab	100	61.395	Labrus_bergylta
ENSBTAG00000016723	GFI1	99	77.222	ENSLACG00000017590	-	99	77.222	Latimeria_chalumnae
ENSBTAG00000016723	GFI1	100	69.860	ENSLACG00000013362	GFI1	98	69.860	Latimeria_chalumnae
ENSBTAG00000016723	GFI1	100	67.832	ENSLOCG00000004711	gfi1ab	100	66.207	Lepisosteus_oculatus
ENSBTAG00000016723	GFI1	100	85.782	ENSLAFG00000018346	GFI1	100	84.834	Loxodonta_africana
ENSBTAG00000016723	GFI1	100	91.943	ENSMFAG00000045801	GFI1	100	91.943	Macaca_fascicularis
ENSBTAG00000016723	GFI1	100	91.943	ENSMNEG00000036338	GFI1	100	91.943	Macaca_nemestrina
ENSBTAG00000016723	GFI1	100	91.943	ENSMLEG00000036181	GFI1	100	91.943	Mandrillus_leucophaeus
ENSBTAG00000016723	GFI1	100	64.235	ENSMAMG00000008125	gfi1ab	100	61.882	Mastacembelus_armatus
ENSBTAG00000016723	GFI1	100	64.319	ENSMZEG00005009895	gfi1ab	100	63.380	Maylandia_zebra
ENSBTAG00000016723	GFI1	88	76.075	ENSMGAG00000008187	GFI1	100	76.075	Meleagris_gallopavo
ENSBTAG00000016723	GFI1	100	92.654	ENSMICG00000047208	GFI1	100	92.654	Microcebus_murinus
ENSBTAG00000016723	GFI1	100	61.176	ENSMMOG00000005556	gfi1ab	100	60.706	Mola_mola
ENSBTAG00000016723	GFI1	100	80.275	ENSMODG00000011802	GFI1	100	79.587	Monodelphis_domestica
ENSBTAG00000016723	GFI1	100	62.911	ENSMALG00000014672	gfi1ab	100	61.647	Monopterus_albus
ENSBTAG00000016723	GFI1	100	87.234	MGP_CAROLIEiJ_G0027508	Gfi1	100	99.259	Mus_caroli
ENSBTAG00000016723	GFI1	100	86.761	ENSMUSG00000029275	Gfi1	100	86.761	Mus_musculus
ENSBTAG00000016723	GFI1	100	86.761	MGP_PahariEiJ_G0017280	Gfi1	100	99.259	Mus_pahari
ENSBTAG00000016723	GFI1	100	86.525	MGP_SPRETEiJ_G0028507	Gfi1	100	86.525	Mus_spretus
ENSBTAG00000016723	GFI1	100	83.649	ENSMPUG00000004178	GFI1	97	83.649	Mustela_putorius_furo
ENSBTAG00000016723	GFI1	100	89.858	ENSMLUG00000015191	GFI1	97	89.151	Myotis_lucifugus
ENSBTAG00000016723	GFI1	100	63.073	ENSNBRG00000015774	gfi1ab	100	61.009	Neolamprologus_brichardi
ENSBTAG00000016723	GFI1	93	90.281	ENSNLEG00000010470	GFI1	97	90.281	Nomascus_leucogenys
ENSBTAG00000016723	GFI1	100	90.758	ENSOPRG00000001473	GFI1	100	90.758	Ochotona_princeps
ENSBTAG00000016723	GFI1	100	64.085	ENSONIG00000019246	gfi1ab	100	63.146	Oreochromis_niloticus
ENSBTAG00000016723	GFI1	86	87.432	ENSOCUG00000023553	GFI1	93	89.344	Oryctolagus_cuniculus
ENSBTAG00000016723	GFI1	100	60.047	ENSORLG00000005060	GFI1	100	59.579	Oryzias_latipes
ENSBTAG00000016723	GFI1	100	60.941	ENSORLG00000013806	gfi1ab	100	60.471	Oryzias_latipes
ENSBTAG00000016723	GFI1	100	54.588	ENSORLG00020002817	GFI1	90	62.080	Oryzias_latipes_hni
ENSBTAG00000016723	GFI1	100	61.412	ENSORLG00020001602	gfi1ab	100	60.941	Oryzias_latipes_hni
ENSBTAG00000016723	GFI1	100	60.093	ENSORLG00015006070	GFI1	100	59.165	Oryzias_latipes_hsok
ENSBTAG00000016723	GFI1	100	59.155	ENSOMEG00000016722	GFI1	100	59.441	Oryzias_melastigma
ENSBTAG00000016723	GFI1	100	76.960	ENSOGAG00000027913	GFI1	100	78.571	Otolemur_garnettii
ENSBTAG00000016723	GFI1	69	98.095	ENSOARG00000016329	GFI1	94	98.095	Ovis_aries
ENSBTAG00000016723	GFI1	100	77.465	ENSPPAG00000042186	GFI1	100	67.857	Pan_paniscus
ENSBTAG00000016723	GFI1	100	95.261	ENSPPRG00000007521	GFI1	100	95.261	Panthera_pardus
ENSBTAG00000016723	GFI1	100	92.180	ENSPTRG00000043053	GFI1	100	92.180	Pan_troglodytes
ENSBTAG00000016723	GFI1	100	91.943	ENSPANG00000016433	GFI1	100	91.943	Papio_anubis
ENSBTAG00000016723	GFI1	100	65.972	ENSPKIG00000004263	GFI1	100	64.155	Paramormyrops_kingsleyae
ENSBTAG00000016723	GFI1	88	75.806	ENSPSIG00000008734	GFI1	97	75.806	Pelodiscus_sinensis
ENSBTAG00000016723	GFI1	100	58.920	ENSPMGG00000012546	gfi1ab	100	59.338	Periophthalmus_magnuspinnatus
ENSBTAG00000016723	GFI1	100	82.051	ENSPCIG00000013728	GFI1	100	81.818	Phascolarctos_cinereus
ENSBTAG00000016723	GFI1	50	50.926	ENSPFOG00000024581	-	67	50.926	Poecilia_formosa
ENSBTAG00000016723	GFI1	100	62.937	ENSPFOG00000023214	gfi1ab	100	60.140	Poecilia_formosa
ENSBTAG00000016723	GFI1	100	59.028	ENSPLAG00000005376	GFI1	91	58.000	Poecilia_latipinna
ENSBTAG00000016723	GFI1	100	62.937	ENSPLAG00000010879	gfi1ab	98	76.471	Poecilia_latipinna
ENSBTAG00000016723	GFI1	100	62.972	ENSPMEG00000013694	gfi1ab	100	60.993	Poecilia_mexicana
ENSBTAG00000016723	GFI1	100	59.028	ENSPMEG00000019299	GFI1	100	60.185	Poecilia_mexicana
ENSBTAG00000016723	GFI1	100	53.066	ENSPREG00000007997	GFI1	100	54.358	Poecilia_reticulata
ENSBTAG00000016723	GFI1	100	62.937	ENSPREG00000014097	gfi1ab	100	60.000	Poecilia_reticulata
ENSBTAG00000016723	GFI1	100	79.059	ENSPCAG00000011020	GFI1	100	79.059	Procavia_capensis
ENSBTAG00000016723	GFI1	100	91.706	ENSPCOG00000020540	GFI1	100	91.706	Propithecus_coquereli
ENSBTAG00000016723	GFI1	100	88.389	ENSPVAG00000006928	GFI1	100	88.389	Pteropus_vampyrus
ENSBTAG00000016723	GFI1	100	64.085	ENSPNYG00000021183	gfi1ab	100	63.146	Pundamilia_nyererei
ENSBTAG00000016723	GFI1	100	55.245	ENSPNAG00000028014	GFI1	100	55.012	Pygocentrus_nattereri
ENSBTAG00000016723	GFI1	100	61.229	ENSPNAG00000027258	gfi1ab	100	60.520	Pygocentrus_nattereri
ENSBTAG00000016723	GFI1	99	50.628	ENSPNAG00000014299	-	58	62.147	Pygocentrus_nattereri
ENSBTAG00000016723	GFI1	100	86.288	ENSRNOG00000002042	Gfi1	100	86.288	Rattus_norvegicus
ENSBTAG00000016723	GFI1	100	91.943	ENSRBIG00000036467	GFI1	100	91.943	Rhinopithecus_bieti
ENSBTAG00000016723	GFI1	100	91.943	ENSRROG00000031687	GFI1	100	91.943	Rhinopithecus_roxellana
ENSBTAG00000016723	GFI1	100	90.284	ENSSBOG00000031300	GFI1	100	90.284	Saimiri_boliviensis_boliviensis
ENSBTAG00000016723	GFI1	100	67.832	ENSSFOG00015020295	gfi1	100	67.366	Scleropages_formosus
ENSBTAG00000016723	GFI1	100	63.318	ENSSMAG00000002782	gfi1ab	100	62.676	Scophthalmus_maximus
ENSBTAG00000016723	GFI1	100	62.411	ENSSDUG00000022410	gfi1ab	100	62.411	Seriola_dumerili
ENSBTAG00000016723	GFI1	100	62.884	ENSSLDG00000020163	gfi1ab	100	62.648	Seriola_lalandi_dorsalis
ENSBTAG00000016723	GFI1	82	76.471	ENSSPAG00000009140	gfi1ab	100	76.471	Stegastes_partitus
ENSBTAG00000016723	GFI1	100	95.952	ENSSSCG00000006902	GFI1	100	95.952	Sus_scrofa
ENSBTAG00000016723	GFI1	88	75.472	ENSTGUG00000006060	GFI1	100	75.472	Taeniopygia_guttata
ENSBTAG00000016723	GFI1	100	60.563	ENSTRUG00000000415	gfi1ab	100	60.329	Takifugu_rubripes
ENSBTAG00000016723	GFI1	100	60.280	ENSTNIG00000000651	gfi1ab	97	55.804	Tetraodon_nigroviridis
ENSBTAG00000016723	GFI1	100	95.714	ENSTTRG00000000082	GFI1	100	95.714	Tursiops_truncatus
ENSBTAG00000016723	GFI1	100	89.362	ENSUAMG00000021124	GFI1	91	89.598	Ursus_americanus
ENSBTAG00000016723	GFI1	100	67.773	ENSXETG00000023006	gfi1	98	66.745	Xenopus_tropicalis
ENSBTAG00000016723	GFI1	100	61.860	ENSXMAG00000010523	gfi1ab	100	59.674	Xiphophorus_maculatus
ENSBTAG00000016723	GFI1	50	51.887	ENSXMAG00000006527	-	65	51.887	Xiphophorus_maculatus
ENSBTAG00000016723	GFI1	100	53.989	ENSXMAG00000009274	GFI1	70	50.636	Xiphophorus_maculatus