EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000016849 (Gene tree)
Gene ID: -
Gene Symbol: PABPC1L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 1 like
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 12456 bases
Position: chr13:73331681-73344136
Accession: 57014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000022412	RRM_1	PF00076.22	4.7e-34	1	2
ENSBTAP00000022412	RRM_1	PF00076.22	4.7e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSBTAG00000016849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000016849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000016849	PABPC1L	50	37.349	ENSBTAG00000008771	MYEF2	59	37.349
ENSBTAG00000016849	PABPC1L	67	56.459	ENSBTAG00000046902	PABPC4L	90	56.459
ENSBTAG00000016849	PABPC1L	85	64.437	ENSBTAG00000046358	PABPC1	65	64.437
ENSBTAG00000016849	PABPC1L	55	43.750	ENSBTAG00000052491	-	69	43.750
ENSBTAG00000016849	PABPC1L	57	32.653	ENSBTAG00000055300	-	95	32.653
ENSBTAG00000016849	PABPC1L	85	64.413	ENSBTAG00000017125	PABPC4	64	64.413
ENSBTAG00000016849	PABPC1L	55	43.750	ENSBTAG00000050902	-	70	43.750
ENSBTAG00000016849	PABPC1L	65	51.980	ENSBTAG00000019942	PABPC5	83	51.980

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000016849	PABPC1L	85	78.136	ENSG00000101104	PABPC1L	87	80.128	Homo_sapiens
ENSBTAG00000016849	PABPC1L	85	63.309	ENSAPOG00000010842	pabpc1l	66	63.309	Acanthochromis_polyacanthus
ENSBTAG00000016849	PABPC1L	78	85.938	ENSAMEG00000004099	PABPC1L	66	77.027	Ailuropoda_melanoleuca
ENSBTAG00000016849	PABPC1L	87	63.103	ENSACIG00000021004	-	74	69.328	Amphilophus_citrinellus
ENSBTAG00000016849	PABPC1L	76	66.135	ENSAOCG00000006167	-	60	66.939	Amphiprion_ocellaris
ENSBTAG00000016849	PABPC1L	85	62.230	ENSAPEG00000010558	-	88	66.135	Amphiprion_percula
ENSBTAG00000016849	PABPC1L	85	63.669	ENSATEG00000007428	pabpc1l	66	63.669	Anabas_testudineus
ENSBTAG00000016849	PABPC1L	74	75.510	ENSAPLG00000008415	PABPC1L	65	75.510	Anas_platyrhynchos
ENSBTAG00000016849	PABPC1L	74	73.469	ENSACAG00000011841	PABPC1L	59	73.469	Anolis_carolinensis
ENSBTAG00000016849	PABPC1L	87	75.088	ENSANAG00000026826	PABPC1L	67	75.088	Aotus_nancymaae
ENSBTAG00000016849	PABPC1L	89	60.884	ENSACLG00000024791	pabpc1l	66	61.246	Astatotilapia_calliptera
ENSBTAG00000016849	PABPC1L	75	71.255	ENSAMXG00000013552	pabpc1l	60	71.138	Astyanax_mexicanus
ENSBTAG00000016849	PABPC1L	93	71.895	ENSCJAG00000017628	PABPC1L	71	71.895	Callithrix_jacchus
ENSBTAG00000016849	PABPC1L	81	81.579	ENSCAFG00000009573	PABPC1L	62	81.579	Canis_familiaris
ENSBTAG00000016849	PABPC1L	84	76.632	ENSCAFG00020013828	PABPC1L	69	76.632	Canis_lupus_dingo
ENSBTAG00000016849	PABPC1L	85	82.332	ENSCHIG00000025759	PABPC1L	64	82.332	Capra_hircus
ENSBTAG00000016849	PABPC1L	85	74.386	ENSTSYG00000006645	PABPC1L	72	74.386	Carlito_syrichta
ENSBTAG00000016849	PABPC1L	84	70.251	ENSCAPG00000014519	PABPC1L	66	70.251	Cavia_aperea
ENSBTAG00000016849	PABPC1L	78	77.043	ENSCPOG00000013633	PABPC1L	62	77.043	Cavia_porcellus
ENSBTAG00000016849	PABPC1L	73	83.333	ENSCCAG00000023338	PABPC1L	67	71.242	Cebus_capucinus
ENSBTAG00000016849	PABPC1L	85	78.495	ENSCATG00000034065	PABPC1L	67	77.193	Cercocebus_atys
ENSBTAG00000016849	PABPC1L	73	80.417	ENSCLAG00000005298	PABPC1L	67	72.125	Chinchilla_lanigera
ENSBTAG00000016849	PABPC1L	85	78.495	ENSCSAG00000014242	PABPC1L	67	77.193	Chlorocebus_sabaeus
ENSBTAG00000016849	PABPC1L	86	68.929	ENSCPBG00000017755	-	90	68.929	Chrysemys_picta_bellii
ENSBTAG00000016849	PABPC1L	55	43.548	ENSCPBG00000007810	-	81	43.548	Chrysemys_picta_bellii
ENSBTAG00000016849	PABPC1L	82	48.718	ENSCSAVG00000003102	-	90	59.898	Ciona_savignyi
ENSBTAG00000016849	PABPC1L	73	54.772	ENSCSAVG00000004246	-	67	54.618	Ciona_savignyi
ENSBTAG00000016849	PABPC1L	85	78.495	ENSCANG00000037530	PABPC1L	68	76.389	Colobus_angolensis_palliatus
ENSBTAG00000016849	PABPC1L	75	72.177	ENSCGRG00001021938	Pabpc1l	61	72.177	Cricetulus_griseus_chok1gshd
ENSBTAG00000016849	PABPC1L	75	72.177	ENSCGRG00000007946	Pabpc1l	61	72.177	Cricetulus_griseus_crigri
ENSBTAG00000016849	PABPC1L	76	66.265	ENSCSEG00000021295	pabpc1l	69	66.265	Cynoglossus_semilaevis
ENSBTAG00000016849	PABPC1L	89	61.724	ENSCVAG00000015943	-	69	66.403	Cyprinodon_variegatus
ENSBTAG00000016849	PABPC1L	75	69.231	ENSDARG00000002597	pabpc1l	68	69.231	Danio_rerio
ENSBTAG00000016849	PABPC1L	86	77.273	ENSDNOG00000048450	PABPC1L	68	77.273	Dasypus_novemcinctus
ENSBTAG00000016849	PABPC1L	95	69.281	ENSDORG00000001067	Pabpc1l	67	69.281	Dipodomys_ordii
ENSBTAG00000016849	PABPC1L	57	31.544	ENSEASG00005023408	-	96	31.544	Equus_asinus_asinus
ENSBTAG00000016849	PABPC1L	68	86.111	ENSEASG00005023407	-	73	86.111	Equus_asinus_asinus
ENSBTAG00000016849	PABPC1L	67	92.000	ENSECAG00000040139	-	72	92.000	Equus_caballus
ENSBTAG00000016849	PABPC1L	81	78.519	ENSEEUG00000005978	PABPC1L	66	78.519	Erinaceus_europaeus
ENSBTAG00000016849	PABPC1L	75	69.231	ENSELUG00000001811	pabpc1l	67	69.106	Esox_lucius
ENSBTAG00000016849	PABPC1L	85	79.787	ENSFCAG00000011692	PABPC1L	67	79.787	Felis_catus
ENSBTAG00000016849	PABPC1L	74	76.735	ENSFALG00000005372	PABPC1L	63	76.735	Ficedula_albicollis
ENSBTAG00000016849	PABPC1L	74	81.224	ENSFDAG00000008291	PABPC1L	69	73.498	Fukomys_damarensis
ENSBTAG00000016849	PABPC1L	86	63.604	ENSFHEG00000003398	pabpc1l	67	63.604	Fundulus_heteroclitus
ENSBTAG00000016849	PABPC1L	87	61.672	ENSGMOG00000004437	pabpc1l	67	61.672	Gadus_morhua
ENSBTAG00000016849	PABPC1L	86	70.357	ENSGALG00000004123	PABPC1L	90	76.518	Gallus_gallus
ENSBTAG00000016849	PABPC1L	83	64.000	ENSGAFG00000021057	pabpc1l	61	64.000	Gambusia_affinis
ENSBTAG00000016849	PABPC1L	94	57.468	ENSGACG00000002792	pabpc1l	69	57.468	Gasterosteus_aculeatus
ENSBTAG00000016849	PABPC1L	86	68.929	ENSGAGG00000000589	PABPC1L	69	74.902	Gopherus_agassizii
ENSBTAG00000016849	PABPC1L	85	78.136	ENSGGOG00000004584	PABPC1L	68	76.042	Gorilla_gorilla
ENSBTAG00000016849	PABPC1L	89	60.751	ENSHBUG00000006134	pabpc1l	73	62.544	Haplochromis_burtoni
ENSBTAG00000016849	PABPC1L	84	73.852	ENSHGLG00000008434	PABPC1L	67	73.852	Heterocephalus_glaber_female
ENSBTAG00000016849	PABPC1L	52	32.075	ENSHGLG00100019506	-	80	32.075	Heterocephalus_glaber_male
ENSBTAG00000016849	PABPC1L	84	73.852	ENSHGLG00100012151	PABPC1L	67	73.852	Heterocephalus_glaber_male
ENSBTAG00000016849	PABPC1L	87	61.348	ENSHCOG00000009270	pabpc1l	71	61.348	Hippocampus_comes
ENSBTAG00000016849	PABPC1L	85	67.266	ENSIPUG00000012602	pabpc1l	70	67.148	Ictalurus_punctatus
ENSBTAG00000016849	PABPC1L	53	30.189	ENSIPUG00000006780	-	69	30.189	Ictalurus_punctatus
ENSBTAG00000016849	PABPC1L	52	30.189	ENSIPUG00000006760	-	71	30.189	Ictalurus_punctatus
ENSBTAG00000016849	PABPC1L	84	76.241	ENSSTOG00000003739	PABPC1L	67	76.241	Ictidomys_tridecemlineatus
ENSBTAG00000016849	PABPC1L	75	73.790	ENSJJAG00000022406	Pabpc1l	50	73.790	Jaculus_jaculus
ENSBTAG00000016849	PABPC1L	85	63.669	ENSKMAG00000016847	pabpc1l	71	63.669	Kryptolebias_marmoratus
ENSBTAG00000016849	PABPC1L	92	57.667	ENSLBEG00000010084	pabpc1l	70	57.667	Labrus_bergylta
ENSBTAG00000016849	PABPC1L	85	66.667	ENSLACG00000005762	PABPC1L	74	66.667	Latimeria_chalumnae
ENSBTAG00000016849	PABPC1L	85	66.304	ENSLOCG00000007519	pabpc1l	64	66.304	Lepisosteus_oculatus
ENSBTAG00000016849	PABPC1L	74	82.857	ENSLAFG00000003553	PABPC1L	60	82.857	Loxodonta_africana
ENSBTAG00000016849	PABPC1L	85	78.495	ENSMFAG00000040365	PABPC1L	67	77.193	Macaca_fascicularis
ENSBTAG00000016849	PABPC1L	85	78.495	ENSMNEG00000032298	PABPC1L	67	77.193	Macaca_nemestrina
ENSBTAG00000016849	PABPC1L	85	78.495	ENSMLEG00000043139	PABPC1L	67	77.193	Mandrillus_leucophaeus
ENSBTAG00000016849	PABPC1L	74	68.163	ENSMAMG00000011854	pabpc1l	61	68.163	Mastacembelus_armatus
ENSBTAG00000016849	PABPC1L	89	60.884	ENSMZEG00005023713	pabpc1l	66	61.246	Maylandia_zebra
ENSBTAG00000016849	PABPC1L	86	70.714	ENSMGAG00000003674	PABPC1L	65	70.714	Meleagris_gallopavo
ENSBTAG00000016849	PABPC1L	86	64.769	ENSMOCG00000013186	Pabpc1l	67	64.769	Microtus_ochrogaster
ENSBTAG00000016849	PABPC1L	90	61.486	ENSMMOG00000020574	-	72	61.486	Mola_mola
ENSBTAG00000016849	PABPC1L	86	71.831	ENSMODG00000016198	PABPC1L	70	71.831	Monodelphis_domestica
ENSBTAG00000016849	PABPC1L	82	63.838	ENSMALG00000021622	pabpc1l	65	64.419	Monopterus_albus
ENSBTAG00000016849	PABPC1L	86	67.972	MGP_CAROLIEiJ_G0024627	Pabpc1l	67	67.972	Mus_caroli
ENSBTAG00000016849	PABPC1L	86	67.972	ENSMUSG00000054582	Pabpc1l	67	67.972	Mus_musculus
ENSBTAG00000016849	PABPC1L	86	67.972	MGP_PahariEiJ_G0026071	Pabpc1l	67	67.972	Mus_pahari
ENSBTAG00000016849	PABPC1L	86	67.972	MGP_SPRETEiJ_G0025549	Pabpc1l	67	67.972	Mus_spretus
ENSBTAG00000016849	PABPC1L	85	79.078	ENSMPUG00000017646	PABPC1L	66	79.078	Mustela_putorius_furo
ENSBTAG00000016849	PABPC1L	82	73.381	ENSMLUG00000006324	PABPC1L	64	73.381	Myotis_lucifugus
ENSBTAG00000016849	PABPC1L	87	68.905	ENSNGAG00000010458	Pabpc1l	67	68.905	Nannospalax_galili
ENSBTAG00000016849	PABPC1L	87	61.246	ENSNBRG00000016633	pabpc1l	74	68.487	Neolamprologus_brichardi
ENSBTAG00000016849	PABPC1L	84	70.438	ENSMEUG00000007905	-	66	70.438	Notamacropus_eugenii
ENSBTAG00000016849	PABPC1L	87	73.611	ENSOPRG00000011846	PABPC1L	67	73.611	Ochotona_princeps
ENSBTAG00000016849	PABPC1L	74	80.816	ENSODEG00000015482	PABPC1L	70	80.816	Octodon_degus
ENSBTAG00000016849	PABPC1L	87	61.168	ENSONIG00000017314	pabpc1l	66	61.168	Oreochromis_niloticus
ENSBTAG00000016849	PABPC1L	92	60.000	ENSOANG00000015793	-	74	62.313	Ornithorhynchus_anatinus
ENSBTAG00000016849	PABPC1L	65	84.332	ENSOCUG00000003005	PABPC1L	65	69.231	Oryctolagus_cuniculus
ENSBTAG00000016849	PABPC1L	88	62.199	ENSORLG00000010322	pabpc1l	75	68.880	Oryzias_latipes
ENSBTAG00000016849	PABPC1L	88	62.199	ENSORLG00020021193	pabpc1l	75	68.880	Oryzias_latipes_hni
ENSBTAG00000016849	PABPC1L	88	62.199	ENSORLG00015017018	pabpc1l	75	68.880	Oryzias_latipes_hsok
ENSBTAG00000016849	PABPC1L	74	68.980	ENSOMEG00000010789	pabpc1l	57	68.980	Oryzias_melastigma
ENSBTAG00000016849	PABPC1L	85	79.225	ENSOGAG00000032999	PABPC1L	66	79.225	Otolemur_garnettii
ENSBTAG00000016849	PABPC1L	84	82.807	ENSOARG00000004578	PABPC1L	67	82.807	Ovis_aries
ENSBTAG00000016849	PABPC1L	85	78.136	ENSPPAG00000039677	PABPC1L	67	76.842	Pan_paniscus
ENSBTAG00000016849	PABPC1L	65	55.128	ENSPPRG00000019327	-	85	55.128	Panthera_pardus
ENSBTAG00000016849	PABPC1L	85	79.787	ENSPTIG00000006524	PABPC1L	68	79.787	Panthera_tigris_altaica
ENSBTAG00000016849	PABPC1L	65	80.128	ENSPTRG00000013531	PABPC1L	87	80.128	Pan_troglodytes
ENSBTAG00000016849	PABPC1L	85	78.495	ENSPANG00000018788	PABPC1L	67	77.193	Papio_anubis
ENSBTAG00000016849	PABPC1L	82	67.647	ENSPKIG00000007322	pabpc1l	66	67.647	Paramormyrops_kingsleyae
ENSBTAG00000016849	PABPC1L	77	73.810	ENSPSIG00000013289	PABPC1L	91	73.810	Pelodiscus_sinensis
ENSBTAG00000016849	PABPC1L	55	40.909	ENSPMGG00000023117	pabpc1l	81	40.909	Periophthalmus_magnuspinnatus
ENSBTAG00000016849	PABPC1L	84	62.273	ENSPMGG00000023121	-	99	62.273	Periophthalmus_magnuspinnatus
ENSBTAG00000016849	PABPC1L	84	67.376	ENSPEMG00000020671	Pabpc1l	67	67.376	Peromyscus_maniculatus_bairdii
ENSBTAG00000016849	PABPC1L	82	65.185	ENSPFOG00000013241	pabpc1l	64	65.185	Poecilia_formosa
ENSBTAG00000016849	PABPC1L	83	64.000	ENSPLAG00000017490	-	73	62.456	Poecilia_latipinna
ENSBTAG00000016849	PABPC1L	83	64.364	ENSPMEG00000007677	pabpc1l	64	65.185	Poecilia_mexicana
ENSBTAG00000016849	PABPC1L	75	68.699	ENSPREG00000015886	pabpc1l	91	68.699	Poecilia_reticulata
ENSBTAG00000016849	PABPC1L	85	78.495	ENSPPYG00000011042	PABPC1L	66	78.495	Pongo_abelii
ENSBTAG00000016849	PABPC1L	74	58.776	ENSPCAG00000011787	-	59	58.776	Procavia_capensis
ENSBTAG00000016849	PABPC1L	82	79.853	ENSPCOG00000020630	PABPC1L	69	77.273	Propithecus_coquereli
ENSBTAG00000016849	PABPC1L	83	74.007	ENSPVAG00000012663	PABPC1L	67	74.007	Pteropus_vampyrus
ENSBTAG00000016849	PABPC1L	87	61.246	ENSPNYG00000004101	pabpc1l	74	68.487	Pundamilia_nyererei
ENSBTAG00000016849	PABPC1L	75	55.691	ENSPNAG00000021248	pabpc1l	60	55.691	Pygocentrus_nattereri
ENSBTAG00000016849	PABPC1L	84	67.730	ENSRNOG00000012750	Pabpc1l	67	67.730	Rattus_norvegicus
ENSBTAG00000016849	PABPC1L	85	78.495	ENSRBIG00000035381	PABPC1L	67	77.193	Rhinopithecus_bieti
ENSBTAG00000016849	PABPC1L	85	78.495	ENSRROG00000044498	PABPC1L	67	77.193	Rhinopithecus_roxellana
ENSBTAG00000016849	PABPC1L	87	75.439	ENSSBOG00000009532	-	67	75.439	Saimiri_boliviensis_boliviensis
ENSBTAG00000016849	PABPC1L	84	70.909	ENSSHAG00000011446	PABPC1L	64	70.909	Sarcophilus_harrisii
ENSBTAG00000016849	PABPC1L	85	67.391	ENSSFOG00015017304	pabpc1l	65	67.391	Scleropages_formosus
ENSBTAG00000016849	PABPC1L	89	60.410	ENSSMAG00000010516	pabpc1l	72	74.074	Scophthalmus_maximus
ENSBTAG00000016849	PABPC1L	87	63.509	ENSSDUG00000014743	pabpc1l	65	64.029	Seriola_dumerili
ENSBTAG00000016849	PABPC1L	75	74.074	ENSSLDG00000006981	pabpc1l	83	74.074	Seriola_lalandi_dorsalis
ENSBTAG00000016849	PABPC1L	85	68.345	ENSSPUG00000004233	PABPC1L	64	68.345	Sphenodon_punctatus
ENSBTAG00000016849	PABPC1L	90	58.923	ENSSPAG00000017137	pabpc1l	76	58.923	Stegastes_partitus
ENSBTAG00000016849	PABPC1L	85	78.777	ENSSSCG00000007382	PABPC1L	67	78.777	Sus_scrofa
ENSBTAG00000016849	PABPC1L	74	73.152	ENSTGUG00000005114	PABPC1L	61	73.152	Taeniopygia_guttata
ENSBTAG00000016849	PABPC1L	80	65.399	ENSTRUG00000011085	pabpc1l	63	65.399	Takifugu_rubripes
ENSBTAG00000016849	PABPC1L	80	63.396	ENSTNIG00000017903	pabpc1l	62	63.396	Tetraodon_nigroviridis
ENSBTAG00000016849	PABPC1L	87	75.088	ENSTTRG00000007618	PABPC1L	69	75.088	Tursiops_truncatus
ENSBTAG00000016849	PABPC1L	85	80.000	ENSUAMG00000017682	PABPC1L	70	80.000	Ursus_americanus
ENSBTAG00000016849	PABPC1L	78	85.547	ENSUMAG00000025436	PABPC1L	85	85.547	Ursus_maritimus
ENSBTAG00000016849	PABPC1L	86	78.445	ENSVVUG00000018939	PABPC1L	59	94.444	Vulpes_vulpes
ENSBTAG00000016849	PABPC1L	74	66.122	ENSXETG00000022831	pabpc1l	60	66.122	Xenopus_tropicalis
ENSBTAG00000016849	PABPC1L	82	65.185	ENSXCOG00000005459	pabpc1l	80	61.957	Xiphophorus_couchianus
ENSBTAG00000016849	PABPC1L	83	64.364	ENSXMAG00000017135	pabpc1l	73	62.807	Xiphophorus_maculatus