EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000017001 (Gene tree)
Gene ID: 507132
Gene Symbol: RBM28
Alias: -
Full Name: Bos taurus RNA binding motif protein 28 (RBM28)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 32308 bases
Position: chr4:92499373-92531680
Accession: NM_001191390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000022610	RRM_1	PF00076.22	8.2e-59	1	4
ENSBTAP00000022610	RRM_1	PF00076.22	8.2e-59	2	4
ENSBTAP00000022610	RRM_1	PF00076.22	8.2e-59	3	4
ENSBTAP00000022610	RRM_1	PF00076.22	8.2e-59	4	4
ENSBTAP00000055012	RRM_1	PF00076.22	6.5e-30	1	3
ENSBTAP00000055012	RRM_1	PF00076.22	6.5e-30	2	3
ENSBTAP00000055012	RRM_1	PF00076.22	6.5e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000022610	-	4115	XM_005205680	ENSBTAP00000022610	751 (aa)	XP_005205737	E1BLD4
ENSBTAT00000065989	-	2384	-	ENSBTAP00000055012	610 (aa)	-	G3MZL2

Gene Model

Click here to download ENSBTAG00000017001's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000017001's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000017001	RBM28	100	100.000	ENSG00000106344	RBM28	100	84.100	Homo_sapiens
ENSBTAG00000017001	RBM28	77	61.538	ENSAPOG00000015512	rbm28	73	61.538	Acanthochromis_polyacanthus
ENSBTAG00000017001	RBM28	100	97.500	ENSAMEG00000004776	RBM28	92	92.708	Ailuropoda_melanoleuca
ENSBTAG00000017001	RBM28	69	55.714	ENSACIG00000023153	rbm28	91	55.714	Amphilophus_citrinellus
ENSBTAG00000017001	RBM28	77	62.500	ENSAOCG00000000462	rbm28	76	62.500	Amphiprion_ocellaris
ENSBTAG00000017001	RBM28	77	62.500	ENSAPEG00000012996	rbm28	78	62.500	Amphiprion_percula
ENSBTAG00000017001	RBM28	79	65.000	ENSATEG00000001672	rbm28	69	65.000	Anabas_testudineus
ENSBTAG00000017001	RBM28	100	100.000	ENSANAG00000033922	RBM28	100	83.841	Aotus_nancymaae
ENSBTAG00000017001	RBM28	100	52.632	ENSACLG00000025024	rbm28	66	56.152	Astatotilapia_calliptera
ENSBTAG00000017001	RBM28	71	58.409	ENSAMXG00000000763	rbm28	99	58.998	Astyanax_mexicanus
ENSBTAG00000017001	RBM28	100	100.000	ENSCJAG00000017731	RBM28	100	82.021	Callithrix_jacchus
ENSBTAG00000017001	RBM28	100	95.000	ENSCAFG00000001667	RBM28	100	85.904	Canis_familiaris
ENSBTAG00000017001	RBM28	100	95.000	ENSCAFG00020021648	RBM28	100	85.904	Canis_lupus_dingo
ENSBTAG00000017001	RBM28	100	100.000	ENSCHIG00000014146	RBM28	100	95.219	Capra_hircus
ENSBTAG00000017001	RBM28	100	95.000	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSBTAG00000017001	RBM28	83	60.606	ENSCAPG00000013218	RBM28	100	60.159	Cavia_aperea
ENSBTAG00000017001	RBM28	100	95.000	ENSCPOG00000006253	RBM28	100	81.266	Cavia_porcellus
ENSBTAG00000017001	RBM28	100	100.000	ENSCCAG00000035105	RBM28	100	83.794	Cebus_capucinus
ENSBTAG00000017001	RBM28	100	97.500	ENSCATG00000040497	RBM28	100	82.677	Cercocebus_atys
ENSBTAG00000017001	RBM28	100	95.000	ENSCLAG00000003707	RBM28	90	95.000	Chinchilla_lanigera
ENSBTAG00000017001	RBM28	100	100.000	ENSCSAG00000010161	RBM28	100	83.663	Chlorocebus_sabaeus
ENSBTAG00000017001	RBM28	56	100.000	ENSCHOG00000001994	-	63	91.935	Choloepus_hoffmanni
ENSBTAG00000017001	RBM28	61	62.061	ENSCPBG00000018088	RBM28	76	64.128	Chrysemys_picta_bellii
ENSBTAG00000017001	RBM28	72	40.000	ENSCING00000009238	-	51	39.783	Ciona_intestinalis
ENSBTAG00000017001	RBM28	55	42.353	ENSCSAVG00000007149	-	94	42.262	Ciona_savignyi
ENSBTAG00000017001	RBM28	90	100.000	ENSCANG00000038397	RBM28	100	84.411	Colobus_angolensis_palliatus
ENSBTAG00000017001	RBM28	88	100.000	ENSCGRG00001021278	Rbm28	82	100.000	Cricetulus_griseus_chok1gshd
ENSBTAG00000017001	RBM28	100	100.000	ENSCGRG00000005098	Rbm28	82	100.000	Cricetulus_griseus_crigri
ENSBTAG00000017001	RBM28	100	54.545	ENSCSEG00000004212	rbm28	76	54.545	Cynoglossus_semilaevis
ENSBTAG00000017001	RBM28	80	65.000	ENSCVAG00000010493	rbm28	90	65.000	Cyprinodon_variegatus
ENSBTAG00000017001	RBM28	86	56.629	ENSDARG00000025332	rbm28	75	56.720	Danio_rerio
ENSBTAG00000017001	RBM28	100	100.000	ENSDNOG00000001124	RBM28	100	84.565	Dasypus_novemcinctus
ENSBTAG00000017001	RBM28	81	81.048	ENSDORG00000004184	Rbm28	97	81.048	Dipodomys_ordii
ENSBTAG00000017001	RBM28	100	90.909	ENSETEG00000007130	RBM28	82	90.909	Echinops_telfairi
ENSBTAG00000017001	RBM28	99	40.662	ENSEBUG00000004419	rbm28	60	46.420	Eptatretus_burgeri
ENSBTAG00000017001	RBM28	100	97.500	ENSEASG00005008528	RBM28	100	85.658	Equus_asinus_asinus
ENSBTAG00000017001	RBM28	100	97.500	ENSECAG00000007745	RBM28	100	85.026	Equus_caballus
ENSBTAG00000017001	RBM28	100	95.000	ENSEEUG00000002389	RBM28	82	95.000	Erinaceus_europaeus
ENSBTAG00000017001	RBM28	100	62.500	ENSELUG00000020602	rbm28	74	62.500	Esox_lucius
ENSBTAG00000017001	RBM28	100	100.000	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSBTAG00000017001	RBM28	100	92.500	ENSFDAG00000010169	RBM28	100	82.157	Fukomys_damarensis
ENSBTAG00000017001	RBM28	84	56.566	ENSGMOG00000007091	rbm28	72	51.954	Gadus_morhua
ENSBTAG00000017001	RBM28	73	54.989	ENSGAFG00000004802	rbm28	96	55.882	Gambusia_affinis
ENSBTAG00000017001	RBM28	77	65.714	ENSGACG00000012612	rbm28	100	51.117	Gasterosteus_aculeatus
ENSBTAG00000017001	RBM28	83	69.712	ENSGAGG00000008873	RBM28	93	80.220	Gopherus_agassizii
ENSBTAG00000017001	RBM28	95	83.079	ENSGGOG00000004644	RBM28	97	83.218	Gorilla_gorilla
ENSBTAG00000017001	RBM28	91	52.967	ENSHBUG00000009611	rbm28	94	53.468	Haplochromis_burtoni
ENSBTAG00000017001	RBM28	100	95.000	ENSHGLG00000005409	RBM28	90	95.000	Heterocephalus_glaber_female
ENSBTAG00000017001	RBM28	100	95.000	ENSHGLG00100016458	RBM28	90	95.000	Heterocephalus_glaber_male
ENSBTAG00000017001	RBM28	78	67.500	ENSHCOG00000010597	rbm28	90	48.028	Hippocampus_comes
ENSBTAG00000017001	RBM28	69	48.578	ENSIPUG00000007103	rbm28	81	48.456	Ictalurus_punctatus
ENSBTAG00000017001	RBM28	100	93.182	ENSSTOG00000002169	RBM28	100	82.898	Ictidomys_tridecemlineatus
ENSBTAG00000017001	RBM28	100	97.500	ENSJJAG00000022400	Rbm28	89	97.500	Jaculus_jaculus
ENSBTAG00000017001	RBM28	80	67.500	ENSKMAG00000013348	rbm28	73	67.500	Kryptolebias_marmoratus
ENSBTAG00000017001	RBM28	68	76.667	ENSLACG00000010485	-	50	76.667	Latimeria_chalumnae
ENSBTAG00000017001	RBM28	100	62.371	ENSLOCG00000015541	rbm28	75	63.077	Lepisosteus_oculatus
ENSBTAG00000017001	RBM28	100	100.000	ENSLAFG00000010717	RBM28	100	82.431	Loxodonta_africana
ENSBTAG00000017001	RBM28	100	97.500	ENSMFAG00000031036	RBM28	100	82.940	Macaca_fascicularis
ENSBTAG00000017001	RBM28	100	97.500	ENSMMUG00000007250	RBM28	100	82.307	Macaca_mulatta
ENSBTAG00000017001	RBM28	100	97.500	ENSMNEG00000036970	RBM28	100	82.695	Macaca_nemestrina
ENSBTAG00000017001	RBM28	80	97.500	ENSMLEG00000037717	RBM28	88	97.500	Mandrillus_leucophaeus
ENSBTAG00000017001	RBM28	100	62.500	ENSMAMG00000008525	rbm28	63	62.500	Mastacembelus_armatus
ENSBTAG00000017001	RBM28	93	49.120	ENSMZEG00005019625	rbm28	63	56.152	Maylandia_zebra
ENSBTAG00000017001	RBM28	100	100.000	ENSMAUG00000002263	Rbm28	82	100.000	Mesocricetus_auratus
ENSBTAG00000017001	RBM28	93	80.332	ENSMICG00000000107	RBM28	100	80.886	Microcebus_murinus
ENSBTAG00000017001	RBM28	100	100.000	ENSMOCG00000014615	Rbm28	81	100.000	Microtus_ochrogaster
ENSBTAG00000017001	RBM28	71	54.713	ENSMMOG00000008600	rbm28	89	53.075	Mola_mola
ENSBTAG00000017001	RBM28	100	87.500	ENSMODG00000015151	RBM28	100	73.263	Monodelphis_domestica
ENSBTAG00000017001	RBM28	79	65.000	ENSMALG00000006419	rbm28	72	65.000	Monopterus_albus
ENSBTAG00000017001	RBM28	100	97.500	MGP_CAROLIEiJ_G0028162	Rbm28	82	97.500	Mus_caroli
ENSBTAG00000017001	RBM28	100	97.500	ENSMUSG00000029701	Rbm28	100	79.255	Mus_musculus
ENSBTAG00000017001	RBM28	100	97.500	MGP_PahariEiJ_G0021920	Rbm28	100	79.708	Mus_pahari
ENSBTAG00000017001	RBM28	100	97.500	MGP_SPRETEiJ_G0029162	Rbm28	100	79.521	Mus_spretus
ENSBTAG00000017001	RBM28	100	100.000	ENSMPUG00000006511	RBM28	100	84.433	Mustela_putorius_furo
ENSBTAG00000017001	RBM28	100	100.000	ENSMLUG00000002186	RBM28	100	85.696	Myotis_lucifugus
ENSBTAG00000017001	RBM28	100	92.500	ENSNGAG00000017946	-	100	76.831	Nannospalax_galili
ENSBTAG00000017001	RBM28	100	100.000	ENSNGAG00000006480	-	81	100.000	Nannospalax_galili
ENSBTAG00000017001	RBM28	100	100.000	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSBTAG00000017001	RBM28	81	82.822	ENSMEUG00000009611	RBM28	83	82.822	Notamacropus_eugenii
ENSBTAG00000017001	RBM28	77	95.000	ENSOPRG00000015140	RBM28	90	75.915	Ochotona_princeps
ENSBTAG00000017001	RBM28	100	77.926	ENSODEG00000003213	-	100	77.926	Octodon_degus
ENSBTAG00000017001	RBM28	77	84.925	ENSODEG00000013217	-	82	85.788	Octodon_degus
ENSBTAG00000017001	RBM28	81	53.611	ENSONIG00000014924	rbm28	63	64.103	Oreochromis_niloticus
ENSBTAG00000017001	RBM28	100	85.000	ENSOANG00000000815	-	82	85.000	Ornithorhynchus_anatinus
ENSBTAG00000017001	RBM28	100	100.000	ENSOCUG00000003009	RBM28	82	100.000	Oryctolagus_cuniculus
ENSBTAG00000017001	RBM28	99	67.500	ENSORLG00000009636	rbm28	63	67.500	Oryzias_latipes
ENSBTAG00000017001	RBM28	79	67.500	ENSORLG00020002123	rbm28	64	67.500	Oryzias_latipes_hni
ENSBTAG00000017001	RBM28	78	72.222	ENSORLG00015015030	rbm28	97	60.680	Oryzias_latipes_hsok
ENSBTAG00000017001	RBM28	79	67.500	ENSOMEG00000007801	rbm28	68	67.500	Oryzias_melastigma
ENSBTAG00000017001	RBM28	90	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSBTAG00000017001	RBM28	100	100.000	ENSOARG00000002547	RBM28	100	95.225	Ovis_aries
ENSBTAG00000017001	RBM28	100	100.000	ENSPPAG00000041730	RBM28	100	83.617	Pan_paniscus
ENSBTAG00000017001	RBM28	100	100.000	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSBTAG00000017001	RBM28	100	100.000	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSBTAG00000017001	RBM28	100	100.000	ENSPTRG00000019659	RBM28	100	82.831	Pan_troglodytes
ENSBTAG00000017001	RBM28	100	97.500	ENSPANG00000022295	RBM28	100	82.045	Papio_anubis
ENSBTAG00000017001	RBM28	99	57.500	ENSPKIG00000023453	rbm28	77	57.500	Paramormyrops_kingsleyae
ENSBTAG00000017001	RBM28	89	55.083	ENSPMGG00000012840	rbm28	93	55.083	Periophthalmus_magnuspinnatus
ENSBTAG00000017001	RBM28	89	100.000	ENSPEMG00000020673	Rbm28	100	78.249	Peromyscus_maniculatus_bairdii
ENSBTAG00000017001	RBM28	59	45.119	ENSPMAG00000002948	-	99	45.722	Petromyzon_marinus
ENSBTAG00000017001	RBM28	100	87.500	ENSPCIG00000012810	RBM28	89	87.500	Phascolarctos_cinereus
ENSBTAG00000017001	RBM28	81	65.000	ENSPFOG00000018209	rbm28	100	50.847	Poecilia_formosa
ENSBTAG00000017001	RBM28	80	65.000	ENSPLAG00000016078	rbm28	87	65.000	Poecilia_latipinna
ENSBTAG00000017001	RBM28	81	65.000	ENSPMEG00000004292	rbm28	100	50.781	Poecilia_mexicana
ENSBTAG00000017001	RBM28	79	65.000	ENSPREG00000014287	rbm28	88	65.000	Poecilia_reticulata
ENSBTAG00000017001	RBM28	100	100.000	ENSPPYG00000017975	RBM28	100	84.321	Pongo_abelii
ENSBTAG00000017001	RBM28	65	97.500	ENSPCAG00000008223	RBM28	82	74.085	Procavia_capensis
ENSBTAG00000017001	RBM28	100	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSBTAG00000017001	RBM28	73	100.000	ENSPVAG00000005443	RBM28	74	96.923	Pteropus_vampyrus
ENSBTAG00000017001	RBM28	100	52.632	ENSPNYG00000014003	rbm28	66	55.506	Pundamilia_nyererei
ENSBTAG00000017001	RBM28	100	97.500	ENSRNOG00000005468	Rbm28	82	97.500	Rattus_norvegicus
ENSBTAG00000017001	RBM28	100	100.000	ENSRBIG00000033990	RBM28	100	82.723	Rhinopithecus_bieti
ENSBTAG00000017001	RBM28	100	100.000	ENSRROG00000040747	RBM28	82	100.000	Rhinopithecus_roxellana
ENSBTAG00000017001	RBM28	96	100.000	ENSSBOG00000012308	RBM28	78	100.000	Saimiri_boliviensis_boliviensis
ENSBTAG00000017001	RBM28	96	68.767	ENSSHAG00000017017	RBM28	99	67.667	Sarcophilus_harrisii
ENSBTAG00000017001	RBM28	73	52.691	ENSSMAG00000003885	rbm28	96	50.106	Scophthalmus_maximus
ENSBTAG00000017001	RBM28	72	55.580	ENSSDUG00000014270	rbm28	86	56.027	Seriola_dumerili
ENSBTAG00000017001	RBM28	79	57.500	ENSSLDG00000020099	rbm28	63	57.500	Seriola_lalandi_dorsalis
ENSBTAG00000017001	RBM28	71	97.500	ENSSARG00000008303	RBM28	80	85.861	Sorex_araneus
ENSBTAG00000017001	RBM28	67	73.529	ENSSPUG00000000838	RBM28	78	73.529	Sphenodon_punctatus
ENSBTAG00000017001	RBM28	100	100.000	ENSSSCG00000031847	RBM28	100	88.228	Sus_scrofa
ENSBTAG00000017001	RBM28	99	65.000	ENSTNIG00000017962	rbm28	90	65.000	Tetraodon_nigroviridis
ENSBTAG00000017001	RBM28	86	84.024	ENSTBEG00000012749	RBM28	85	84.024	Tupaia_belangeri
ENSBTAG00000017001	RBM28	100	100.000	ENSTTRG00000013647	RBM28	100	85.921	Tursiops_truncatus
ENSBTAG00000017001	RBM28	100	100.000	ENSUAMG00000006949	RBM28	85	100.000	Ursus_americanus
ENSBTAG00000017001	RBM28	100	100.000	ENSUMAG00000005997	RBM28	100	86.111	Ursus_maritimus
ENSBTAG00000017001	RBM28	94	78.397	ENSVPAG00000008304	RBM28	87	79.604	Vicugna_pacos
ENSBTAG00000017001	RBM28	100	95.000	ENSVVUG00000007270	RBM28	100	85.771	Vulpes_vulpes
ENSBTAG00000017001	RBM28	99	67.500	ENSXETG00000009271	rbm28	64	67.500	Xenopus_tropicalis
ENSBTAG00000017001	RBM28	72	53.968	ENSXCOG00000020357	rbm28	98	52.442	Xiphophorus_couchianus
ENSBTAG00000017001	RBM28	79	67.500	ENSXMAG00000004415	rbm28	88	67.500	Xiphophorus_maculatus