EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSBTAG00000017125 (Gene tree)
Gene ID
534576
Gene Symbol
PABPC4
Alias
-
Full Name
Bos taurus poly(A) binding protein cytoplasmic 4 (PABPC4)%2C mRNA.
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Plus strand
Length
13428 bases
Position
chr3:106494310-106507737
Accession
NM_001083724
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000022761PABPPF00658.182.2e-3111
ENSBTAP00000022761RRM_5PF13893.64.2e-0912
ENSBTAP00000022761RRM_5PF13893.64.2e-0922
ENSBTAP00000022761RRM_1PF00076.225.1e-9214
ENSBTAP00000022761RRM_1PF00076.225.1e-9224
ENSBTAP00000022761RRM_1PF00076.225.1e-9234
ENSBTAP00000022761RRM_1PF00076.225.1e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000022761-2405-ENSBTAP00000022761645 (aa)XP_024845233A4IFC3
Gene Model
Click here to download ENSBTAG00000017125's gene model file
Pathways
Pathway IDPathway NameSource
bta03013RNA transportKEGG
bta03015mRNA surveillance pathwayKEGG
bta03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000017125's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSBTAG00000017125PABPC45733.553ENSBTAG00000000613ELAVL19533.553
ENSBTAG00000017125PABPC45830.625ENSBTAG00000021046ELAVL49130.625
ENSBTAG00000017125PABPC45867.697ENSBTAG00000019942PABPC59567.493
ENSBTAG00000017125PABPC46084.524ENSBTAG00000055300-10084.524
ENSBTAG00000017125PABPC49976.687ENSBTAG00000046358PABPC19977.042
ENSBTAG00000017125PABPC45831.579ENSBTAG00000046348ELAVL28934.940
ENSBTAG00000017125PABPC45737.681ENSBTAG00000008937CELF26337.681
ENSBTAG00000017125PABPC45686.826ENSBTAG00000048536-9886.826
ENSBTAG00000017125PABPC46530.370ENSBTAG00000019182TIA19230.370
ENSBTAG00000017125PABPC45776.382ENSBTAG00000052491-9776.382
ENSBTAG00000017125PABPC45776.768ENSBTAG00000050902-9476.768
ENSBTAG00000017125PABPC46464.413ENSBTAG00000016849PABPC1L8564.413
ENSBTAG00000017125PABPC46074.324ENSBTAG00000046902PABPC4L9974.324
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000017125PABPC410098.915ENSG00000090621PABPC4100100.000Homo_sapiens
ENSBTAG00000017125PABPC49981.085ENSAPOG00000001161pabpc410081.651Acanthochromis_polyacanthus
ENSBTAG00000017125PABPC410096.520ENSAMEG00000011535-10096.520Ailuropoda_melanoleuca
ENSBTAG00000017125PABPC49855.189ENSAMEG00000015083-9955.189Ailuropoda_melanoleuca
ENSBTAG00000017125PABPC410081.804ENSACIG00000023343pabpc410081.804Amphilophus_citrinellus
ENSBTAG00000017125PABPC49981.240ENSAOCG00000021529pabpc49190.807Amphiprion_ocellaris
ENSBTAG00000017125PABPC49981.240ENSAPEG00000019196pabpc410081.651Amphiprion_percula
ENSBTAG00000017125PABPC49980.650ENSATEG00000007402pabpc410080.916Anabas_testudineus
ENSBTAG00000017125PABPC49988.043ENSAPLG00000009729-10087.888Anas_platyrhynchos
ENSBTAG00000017125PABPC49986.736ENSACAG00000002544PABPC410086.213Anolis_carolinensis
ENSBTAG00000017125PABPC410096.672ENSANAG00000025079PABPC410096.672Aotus_nancymaae
ENSBTAG00000017125PABPC410081.346ENSACLG00000019558pabpc410081.957Astatotilapia_calliptera
ENSBTAG00000017125PABPC49976.899ENSAMXG00000018779pabpc49977.209Astyanax_mexicanus
ENSBTAG00000017125PABPC410096.218ENSCJAG00000002512-10096.218Callithrix_jacchus
ENSBTAG00000017125PABPC47888.327ENSCJAG00000045953-9288.281Callithrix_jacchus
ENSBTAG00000017125PABPC410095.504ENSCAFG00000003081PABPC410095.504Canis_familiaris
ENSBTAG00000017125PABPC410096.672ENSCAFG00020004161PABPC410096.672Canis_lupus_dingo
ENSBTAG00000017125PABPC410097.126ENSCHIG00000019398-10097.126Capra_hircus
ENSBTAG00000017125PABPC410079.070ENSCHIG00000023385-10078.605Capra_hircus
ENSBTAG00000017125PABPC410096.520ENSTSYG00000006532PABPC410096.520Carlito_syrichta
ENSBTAG00000017125PABPC49996.510ENSCAPG00000015984PABPC410096.510Cavia_aperea
ENSBTAG00000017125PABPC410096.672ENSCPOG00000009552PABPC410096.672Cavia_porcellus
ENSBTAG00000017125PABPC410096.369ENSCCAG00000037306PABPC410096.369Cebus_capucinus
ENSBTAG00000017125PABPC410096.672ENSCATG00000042164PABPC410096.672Cercocebus_atys
ENSBTAG00000017125PABPC410096.218ENSCLAG00000011899PABPC410096.218Chinchilla_lanigera
ENSBTAG00000017125PABPC410096.672ENSCSAG00000001135PABPC410096.672Chlorocebus_sabaeus
ENSBTAG00000017125PABPC48497.361ENSCHOG00000005327PABPC48197.361Choloepus_hoffmanni
ENSBTAG00000017125PABPC49988.665ENSCPBG00000001038PABPC410088.043Chrysemys_picta_bellii
ENSBTAG00000017125PABPC49996.472ENSCANG00000034177PABPC410096.472Colobus_angolensis_palliatus
ENSBTAG00000017125PABPC410094.887ENSCGRG00001018166Pabpc410094.887Cricetulus_griseus_chok1gshd
ENSBTAG00000017125PABPC49997.188ENSCGRG00000009777Pabpc410097.188Cricetulus_griseus_crigri
ENSBTAG00000017125PABPC410080.734ENSCSEG00000000130pabpc410080.606Cynoglossus_semilaevis
ENSBTAG00000017125PABPC49981.677ENSCVAG00000019246pabpc410082.453Cyprinodon_variegatus
ENSBTAG00000017125PABPC49982.764ENSDARG00000059259pabpc410083.119Danio_rerio
ENSBTAG00000017125PABPC49896.386ENSDNOG00000018444-9996.386Dasypus_novemcinctus
ENSBTAG00000017125PABPC410099.070ENSDORG00000011581Pabpc410099.070Dipodomys_ordii
ENSBTAG00000017125PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSBTAG00000017125PABPC48662.274ENSETEG00000009172-9962.143Echinops_telfairi
ENSBTAG00000017125PABPC49974.729ENSEBUG00000000992pabpc410074.729Eptatretus_burgeri
ENSBTAG00000017125PABPC49774.092ENSEBUG00000013782pabpc49974.458Eptatretus_burgeri
ENSBTAG00000017125PABPC410096.823ENSEASG00005014119PABPC410096.823Equus_asinus_asinus
ENSBTAG00000017125PABPC410096.823ENSECAG00000009396PABPC410096.823Equus_caballus
ENSBTAG00000017125PABPC410093.495ENSEEUG00000002962PABPC410093.495Erinaceus_europaeus
ENSBTAG00000017125PABPC49981.747ENSELUG00000003195pabpc49981.538Esox_lucius
ENSBTAG00000017125PABPC410096.823ENSFCAG00000015254-10096.823Felis_catus
ENSBTAG00000017125PABPC49987.267ENSFALG00000000543PABPC410087.112Ficedula_albicollis
ENSBTAG00000017125PABPC49066.454ENSFDAG00000010581-10061.897Fukomys_damarensis
ENSBTAG00000017125PABPC410096.520ENSFDAG00000020016-10096.520Fukomys_damarensis
ENSBTAG00000017125PABPC410081.498ENSFHEG00000007548pabpc49391.031Fundulus_heteroclitus
ENSBTAG00000017125PABPC49980.740ENSGMOG00000019025pabpc49980.277Gadus_morhua
ENSBTAG00000017125PABPC49988.354ENSGALG00000003800PABPC410088.199Gallus_gallus
ENSBTAG00000017125PABPC410081.260ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSBTAG00000017125PABPC410079.969ENSGACG00000007179pabpc410080.335Gasterosteus_aculeatus
ENSBTAG00000017125PABPC49988.509ENSGAGG00000001888PABPC410087.888Gopherus_agassizii
ENSBTAG00000017125PABPC410096.520ENSGGOG00000004002PABPC410096.520Gorilla_gorilla
ENSBTAG00000017125PABPC410081.498ENSHBUG00000020206pabpc410082.110Haplochromis_burtoni
ENSBTAG00000017125PABPC410099.070ENSHGLG00000011162PABPC410099.070Heterocephalus_glaber_female
ENSBTAG00000017125PABPC410099.070ENSHGLG00100001580PABPC410099.070Heterocephalus_glaber_male
ENSBTAG00000017125PABPC410080.398ENSHCOG00000012694pabpc410080.887Hippocampus_comes
ENSBTAG00000017125PABPC49880.691ENSIPUG00000016620pabpc49980.799Ictalurus_punctatus
ENSBTAG00000017125PABPC410098.915ENSSTOG00000010416PABPC410098.915Ictidomys_tridecemlineatus
ENSBTAG00000017125PABPC410096.899ENSJJAG00000007781Pabpc410096.899Jaculus_jaculus
ENSBTAG00000017125PABPC49981.077ENSKMAG00000013597pabpc49981.202Kryptolebias_marmoratus
ENSBTAG00000017125PABPC410080.488ENSLBEG00000013654pabpc410080.945Labrus_bergylta
ENSBTAG00000017125PABPC49985.031ENSLACG00000011907PABPC410084.877Latimeria_chalumnae
ENSBTAG00000017125PABPC49983.205ENSLOCG00000001877pabpc49983.821Lepisosteus_oculatus
ENSBTAG00000017125PABPC410096.672ENSLAFG00000000151PABPC410096.672Loxodonta_africana
ENSBTAG00000017125PABPC410096.672ENSMFAG00000041481PABPC410096.672Macaca_fascicularis
ENSBTAG00000017125PABPC410096.672ENSMMUG00000007497PABPC410096.672Macaca_mulatta
ENSBTAG00000017125PABPC410096.520ENSMNEG00000043054PABPC410096.520Macaca_nemestrina
ENSBTAG00000017125PABPC410096.672ENSMLEG00000040716PABPC410096.672Mandrillus_leucophaeus
ENSBTAG00000017125PABPC49981.240ENSMAMG00000010025pabpc49981.538Mastacembelus_armatus
ENSBTAG00000017125PABPC410081.193ENSMZEG00005006141pabpc410081.804Maylandia_zebra
ENSBTAG00000017125PABPC49986.418ENSMGAG00000005408PABPC410086.248Meleagris_gallopavo
ENSBTAG00000017125PABPC45681.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSBTAG00000017125PABPC47088.942ENSMAUG00000001295-9788.942Mesocricetus_auratus
ENSBTAG00000017125PABPC47695.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSBTAG00000017125PABPC49978.856ENSMICG00000036729-10081.456Microcebus_murinus
ENSBTAG00000017125PABPC48997.739ENSMICG00000016633-10097.739Microcebus_murinus
ENSBTAG00000017125PABPC410095.338ENSMOCG00000006763Pabpc410095.338Microtus_ochrogaster
ENSBTAG00000017125PABPC410078.923ENSMMOG00000002363pabpc49979.263Mola_mola
ENSBTAG00000017125PABPC49887.771ENSMODG00000017657-10086.930Monodelphis_domestica
ENSBTAG00000017125PABPC45874.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSBTAG00000017125PABPC49980.989ENSMALG00000011017pabpc410081.098Monopterus_albus
ENSBTAG00000017125PABPC49984.522MGP_CAROLIEiJ_G0024864-10084.348Mus_caroli
ENSBTAG00000017125PABPC410095.159MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSBTAG00000017125PABPC410097.984ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSBTAG00000017125PABPC49995.245MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSBTAG00000017125PABPC49975.816MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSBTAG00000017125PABPC49551.133ENSMPUG00000006836-10050.242Mustela_putorius_furo
ENSBTAG00000017125PABPC410096.823ENSMPUG00000014414-10096.823Mustela_putorius_furo
ENSBTAG00000017125PABPC410094.419ENSMLUG00000012068PABPC410094.419Myotis_lucifugus
ENSBTAG00000017125PABPC410099.070ENSNGAG00000018292Pabpc410099.070Nannospalax_galili
ENSBTAG00000017125PABPC45892.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSBTAG00000017125PABPC46586.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSBTAG00000017125PABPC410099.070ENSNLEG00000011928PABPC410099.070Nomascus_leucogenys
ENSBTAG00000017125PABPC48398.511ENSOPRG00000011984PABPC48698.511Ochotona_princeps
ENSBTAG00000017125PABPC49986.475ENSODEG00000017434-10086.475Octodon_degus
ENSBTAG00000017125PABPC45285.714ENSODEG00000013457-10085.714Octodon_degus
ENSBTAG00000017125PABPC410095.915ENSODEG00000006592-10095.915Octodon_degus
ENSBTAG00000017125PABPC410081.498ENSONIG00000008176pabpc410081.804Oreochromis_niloticus
ENSBTAG00000017125PABPC49988.354ENSOANG00000010001PABPC410087.733Ornithorhynchus_anatinus
ENSBTAG00000017125PABPC49696.367ENSOCUG00000000562PABPC48896.367Oryctolagus_cuniculus
ENSBTAG00000017125PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSBTAG00000017125PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSBTAG00000017125PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSBTAG00000017125PABPC49981.550ENSOMEG00000014410pabpc49983.468Oryzias_melastigma
ENSBTAG00000017125PABPC410099.073ENSOGAG00000004067PABPC410099.073Otolemur_garnettii
ENSBTAG00000017125PABPC410097.126ENSOARG00000020060PABPC410097.126Ovis_aries
ENSBTAG00000017125PABPC410096.520ENSPPAG00000043625PABPC410096.520Pan_paniscus
ENSBTAG00000017125PABPC410096.823ENSPPRG00000024727PABPC410096.823Panthera_pardus
ENSBTAG00000017125PABPC410096.823ENSPTIG00000005829PABPC410096.823Panthera_tigris_altaica
ENSBTAG00000017125PABPC410096.520ENSPTRG00000000573PABPC410096.520Pan_troglodytes
ENSBTAG00000017125PABPC410096.823ENSPANG00000009484PABPC410096.823Papio_anubis
ENSBTAG00000017125PABPC49982.407ENSPKIG00000025356pabpc49982.562Paramormyrops_kingsleyae
ENSBTAG00000017125PABPC49988.665ENSPSIG00000016892PABPC410088.043Pelodiscus_sinensis
ENSBTAG00000017125PABPC410079.938ENSPMGG00000009073pabpc49979.385Periophthalmus_magnuspinnatus
ENSBTAG00000017125PABPC410093.178ENSPEMG00000024193-9993.178Peromyscus_maniculatus_bairdii
ENSBTAG00000017125PABPC410095.159ENSPEMG00000023569-9995.159Peromyscus_maniculatus_bairdii
ENSBTAG00000017125PABPC49669.461ENSPMAG00000007885pabpc410068.401Petromyzon_marinus
ENSBTAG00000017125PABPC48971.235ENSPMAG00000002836pabpc410071.743Petromyzon_marinus
ENSBTAG00000017125PABPC49889.241ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSBTAG00000017125PABPC410080.887ENSPFOG00000002682pabpc410081.555Poecilia_formosa
ENSBTAG00000017125PABPC410080.734ENSPLAG00000010112pabpc410081.957Poecilia_latipinna
ENSBTAG00000017125PABPC49981.366ENSPMEG00000019739pabpc410081.707Poecilia_mexicana
ENSBTAG00000017125PABPC410081.193ENSPREG00000001589pabpc410081.957Poecilia_reticulata
ENSBTAG00000017125PABPC410096.520ENSPPYG00000001506PABPC410096.520Pongo_abelii
ENSBTAG00000017125PABPC410091.982ENSPCAG00000003341PABPC410091.982Procavia_capensis
ENSBTAG00000017125PABPC49980.000ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSBTAG00000017125PABPC410096.974ENSPCOG00000023725-10096.974Propithecus_coquereli
ENSBTAG00000017125PABPC49996.141ENSPVAG00000002187PABPC410096.141Pteropus_vampyrus
ENSBTAG00000017125PABPC410081.346ENSPNYG00000006134pabpc410081.957Pundamilia_nyererei
ENSBTAG00000017125PABPC410081.069ENSPNAG00000024355pabpc410081.346Pygocentrus_nattereri
ENSBTAG00000017125PABPC410097.984ENSRNOG00000015642Pabpc410097.984Rattus_norvegicus
ENSBTAG00000017125PABPC410095.814ENSRNOG00000028592AABR07035074.110095.814Rattus_norvegicus
ENSBTAG00000017125PABPC410096.672ENSRBIG00000039761PABPC410096.672Rhinopithecus_bieti
ENSBTAG00000017125PABPC410096.672ENSRROG00000033355PABPC410096.672Rhinopithecus_roxellana
ENSBTAG00000017125PABPC410096.520ENSSBOG00000026193PABPC410096.520Saimiri_boliviensis_boliviensis
ENSBTAG00000017125PABPC49889.082ENSSHAG00000018139PABPC410088.199Sarcophilus_harrisii
ENSBTAG00000017125PABPC49983.628ENSSFOG00015023514pabpc49983.040Scleropages_formosus
ENSBTAG00000017125PABPC49980.680ENSSMAG00000009007pabpc49981.298Scophthalmus_maximus
ENSBTAG00000017125PABPC49980.775ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSBTAG00000017125PABPC49980.775ENSSLDG00000013025pabpc49785.588Seriola_lalandi_dorsalis
ENSBTAG00000017125PABPC410088.502ENSSARG00000000310PABPC410088.351Sorex_araneus
ENSBTAG00000017125PABPC49987.733ENSSPUG00000003204PABPC410087.500Sphenodon_punctatus
ENSBTAG00000017125PABPC49981.579ENSSPAG00000009252pabpc49790.359Stegastes_partitus
ENSBTAG00000017125PABPC410096.974ENSSSCG00000003660-10096.974Sus_scrofa
ENSBTAG00000017125PABPC48951.641ENSSSCG00000036170-9651.641Sus_scrofa
ENSBTAG00000017125PABPC49985.325ENSTGUG00000001266PABPC410085.174Taeniopygia_guttata
ENSBTAG00000017125PABPC410080.398ENSTRUG00000005907pabpc49980.923Takifugu_rubripes
ENSBTAG00000017125PABPC410077.196ENSTNIG00000016902pabpc49976.733Tetraodon_nigroviridis
ENSBTAG00000017125PABPC49984.564ENSTBEG00000009035PABPC410084.396Tupaia_belangeri
ENSBTAG00000017125PABPC49979.541ENSTTRG00000014340PABPC410083.557Tursiops_truncatus
ENSBTAG00000017125PABPC410096.520ENSUAMG00000000303PABPC410096.520Ursus_americanus
ENSBTAG00000017125PABPC410096.520ENSUMAG00000019585PABPC410099.057Ursus_maritimus
ENSBTAG00000017125PABPC48396.429ENSVPAG00000010041PABPC47796.429Vicugna_pacos
ENSBTAG00000017125PABPC410096.672ENSVVUG00000005215PABPC410096.672Vulpes_vulpes
ENSBTAG00000017125PABPC45897.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSBTAG00000017125PABPC49980.124ENSXETG00000010946pabpc410080.124Xenopus_tropicalis
ENSBTAG00000017125PABPC49979.898ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSBTAG00000017125PABPC410081.040ENSXMAG00000019007pabpc410081.804Xiphophorus_maculatus

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