EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000017164 (Gene tree)
Gene ID: 539286
Gene Symbol: LARP4
Alias: -
Full Name: Bos taurus La ribonucleoprotein domain family member 4 (LARP4)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 69556 bases
Position: chr5:29433902-29503457
Accession: NM_001101189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000074341	La	PF05383.17	3.6e-17	1	1
ENSBTAP00000022821	La	PF05383.17	3.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000072760	-	4383	-	ENSBTAP00000074341	733 (aa)	-	A7MB26
ENSBTAT00000022821	-	2202	-	ENSBTAP00000022821	733 (aa)	-	F1MHD9

Gene Model

Click here to download ENSBTAG00000017164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000017164's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000017164	LARP4	99	38.947	ENSBTAG00000013899	LARP4B	96	37.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000017164	LARP4	100	87.619	ENSG00000161813	LARP4	100	95.200	Homo_sapiens
ENSBTAG00000017164	LARP4	99	50.000	ENSAPOG00000007142	larp4aa	95	48.728	Acanthochromis_polyacanthus
ENSBTAG00000017164	LARP4	99	46.354	ENSAPOG00000021331	larp4ab	99	45.946	Acanthochromis_polyacanthus
ENSBTAG00000017164	LARP4	99	90.574	ENSAMEG00000001275	LARP4	100	90.574	Ailuropoda_melanoleuca
ENSBTAG00000017164	LARP4	88	60.925	ENSACIG00000001198	larp4aa	94	72.189	Amphilophus_citrinellus
ENSBTAG00000017164	LARP4	99	45.195	ENSAOCG00000006387	larp4ab	99	44.302	Amphiprion_ocellaris
ENSBTAG00000017164	LARP4	52	57.828	ENSAPEG00000015441	larp4ab	100	58.205	Amphiprion_percula
ENSBTAG00000017164	LARP4	99	42.784	ENSATEG00000001018	larp4ab	99	43.338	Anabas_testudineus
ENSBTAG00000017164	LARP4	99	70.985	ENSAPLG00000013661	LARP4	99	70.580	Anas_platyrhynchos
ENSBTAG00000017164	LARP4	100	65.374	ENSACAG00000017133	LARP4	97	65.374	Anolis_carolinensis
ENSBTAG00000017164	LARP4	100	86.370	ENSANAG00000029342	LARP4	98	90.000	Aotus_nancymaae
ENSBTAG00000017164	LARP4	50	57.825	ENSACLG00000000777	larp4ab	95	58.152	Astatotilapia_calliptera
ENSBTAG00000017164	LARP4	99	50.643	ENSAMXG00000036493	larp4aa	94	51.154	Astyanax_mexicanus
ENSBTAG00000017164	LARP4	100	86.395	ENSCJAG00000021131	LARP4	98	90.000	Callithrix_jacchus
ENSBTAG00000017164	LARP4	100	90.191	ENSCAFG00000008174	LARP4	100	90.301	Canis_familiaris
ENSBTAG00000017164	LARP4	100	90.327	ENSCAFG00020014554	LARP4	100	90.424	Canis_lupus_dingo
ENSBTAG00000017164	LARP4	100	99.045	ENSCHIG00000025965	LARP4	100	99.045	Capra_hircus
ENSBTAG00000017164	LARP4	100	88.571	ENSTSYG00000004342	LARP4	98	91.538	Carlito_syrichta
ENSBTAG00000017164	LARP4	98	67.403	ENSCAPG00000012942	LARP4	100	66.851	Cavia_aperea
ENSBTAG00000017164	LARP4	100	80.408	ENSCPOG00000020519	LARP4	100	80.408	Cavia_porcellus
ENSBTAG00000017164	LARP4	100	86.531	ENSCCAG00000024439	LARP4	98	90.256	Cebus_capucinus
ENSBTAG00000017164	LARP4	99	86.145	ENSCATG00000044528	LARP4	100	86.145	Cercocebus_atys
ENSBTAG00000017164	LARP4	99	85.539	ENSCLAG00000001829	LARP4	100	85.539	Chinchilla_lanigera
ENSBTAG00000017164	LARP4	59	90.672	ENSCHOG00000010490	-	58	90.672	Choloepus_hoffmanni
ENSBTAG00000017164	LARP4	100	71.544	ENSCPBG00000019407	LARP4	91	71.275	Chrysemys_picta_bellii
ENSBTAG00000017164	LARP4	100	79.019	ENSCANG00000033097	-	100	84.091	Colobus_angolensis_palliatus
ENSBTAG00000017164	LARP4	100	88.163	ENSCANG00000029159	-	98	92.051	Colobus_angolensis_palliatus
ENSBTAG00000017164	LARP4	100	83.673	ENSCGRG00001010818	Larp4	100	83.673	Cricetulus_griseus_chok1gshd
ENSBTAG00000017164	LARP4	99	83.654	ENSCGRG00000009382	Larp4	100	83.654	Cricetulus_griseus_crigri
ENSBTAG00000017164	LARP4	99	49.176	ENSCSEG00000001963	larp4aa	82	61.795	Cynoglossus_semilaevis
ENSBTAG00000017164	LARP4	88	44.552	ENSCSEG00000003240	larp4ab	94	44.613	Cynoglossus_semilaevis
ENSBTAG00000017164	LARP4	100	47.204	ENSDARG00000074979	larp4ab	85	78.808	Danio_rerio
ENSBTAG00000017164	LARP4	100	87.347	ENSDNOG00000038525	LARP4	100	87.347	Dasypus_novemcinctus
ENSBTAG00000017164	LARP4	100	84.490	ENSDORG00000004013	Larp4	100	84.490	Dipodomys_ordii
ENSBTAG00000017164	LARP4	71	80.377	ENSETEG00000011683	LARP4	73	80.377	Echinops_telfairi
ENSBTAG00000017164	LARP4	77	39.626	ENSEBUG00000010394	LARP4	91	37.833	Eptatretus_burgeri
ENSBTAG00000017164	LARP4	71	40.702	ENSEBUG00000004426	LARP4	62	51.491	Eptatretus_burgeri
ENSBTAG00000017164	LARP4	99	89.973	ENSEASG00005004356	LARP4	100	95.671	Equus_asinus_asinus
ENSBTAG00000017164	LARP4	100	92.507	ENSECAG00000012479	LARP4	100	92.548	Equus_caballus
ENSBTAG00000017164	LARP4	77	99.145	ENSEEUG00000000316	LARP4	76	99.145	Erinaceus_europaeus
ENSBTAG00000017164	LARP4	86	58.824	ENSELUG00000000395	larp4aa	84	58.824	Esox_lucius
ENSBTAG00000017164	LARP4	98	46.976	ENSELUG00000018650	larp4ab	84	77.434	Esox_lucius
ENSBTAG00000017164	LARP4	100	91.417	ENSFCAG00000031897	LARP4	100	91.417	Felis_catus
ENSBTAG00000017164	LARP4	86	67.085	ENSFALG00000002114	LARP4	98	67.988	Ficedula_albicollis
ENSBTAG00000017164	LARP4	100	85.170	ENSFDAG00000006406	-	100	85.170	Fukomys_damarensis
ENSBTAG00000017164	LARP4	99	47.243	ENSFHEG00000004338	larp4aa	84	60.769	Fundulus_heteroclitus
ENSBTAG00000017164	LARP4	99	44.021	ENSFHEG00000013854	larp4ab	99	43.668	Fundulus_heteroclitus
ENSBTAG00000017164	LARP4	99	48.072	ENSGMOG00000008246	larp4aa	95	48.005	Gadus_morhua
ENSBTAG00000017164	LARP4	95	69.425	ENSGALG00000042122	LARP4	93	69.004	Gallus_gallus
ENSBTAG00000017164	LARP4	98	44.863	ENSGAFG00000021777	larp4ab	99	44.213	Gambusia_affinis
ENSBTAG00000017164	LARP4	99	44.532	ENSGACG00000000680	larp4ab	97	46.232	Gasterosteus_aculeatus
ENSBTAG00000017164	LARP4	99	50.322	ENSGACG00000008381	larp4aa	99	62.532	Gasterosteus_aculeatus
ENSBTAG00000017164	LARP4	100	70.336	ENSGAGG00000006969	LARP4	100	70.067	Gopherus_agassizii
ENSBTAG00000017164	LARP4	99	82.128	ENSGGOG00000015230	LARP4	99	91.076	Gorilla_gorilla
ENSBTAG00000017164	LARP4	92	84.398	ENSHGLG00000005513	-	100	84.398	Heterocephalus_glaber_female
ENSBTAG00000017164	LARP4	86	79.650	ENSHGLG00000013875	-	100	78.537	Heterocephalus_glaber_female
ENSBTAG00000017164	LARP4	63	72.786	ENSHGLG00000010979	-	93	74.501	Heterocephalus_glaber_female
ENSBTAG00000017164	LARP4	100	84.574	ENSHGLG00100016984	-	100	84.574	Heterocephalus_glaber_male
ENSBTAG00000017164	LARP4	99	80.109	ENSHGLG00100011678	-	100	79.155	Heterocephalus_glaber_male
ENSBTAG00000017164	LARP4	63	72.786	ENSHGLG00100002832	-	93	74.501	Heterocephalus_glaber_male
ENSBTAG00000017164	LARP4	99	41.623	ENSHCOG00000020857	larp4ab	99	41.645	Hippocampus_comes
ENSBTAG00000017164	LARP4	99	47.943	ENSHCOG00000015951	larp4aa	95	48.524	Hippocampus_comes
ENSBTAG00000017164	LARP4	99	47.733	ENSIPUG00000007514	larp4aa	95	47.985	Ictalurus_punctatus
ENSBTAG00000017164	LARP4	100	46.316	ENSIPUG00000021659	larp4ab	100	46.174	Ictalurus_punctatus
ENSBTAG00000017164	LARP4	100	87.891	ENSSTOG00000003553	LARP4	100	87.891	Ictidomys_tridecemlineatus
ENSBTAG00000017164	LARP4	52	66.923	ENSJJAG00000014649	-	95	87.619	Jaculus_jaculus
ENSBTAG00000017164	LARP4	99	45.276	ENSKMAG00000018556	larp4ab	99	44.561	Kryptolebias_marmoratus
ENSBTAG00000017164	LARP4	99	47.407	ENSLBEG00000014537	larp4aa	94	47.395	Labrus_bergylta
ENSBTAG00000017164	LARP4	99	43.455	ENSLBEG00000019306	larp4ab	99	43.613	Labrus_bergylta
ENSBTAG00000017164	LARP4	99	58.630	ENSLACG00000019090	LARP4	99	57.576	Latimeria_chalumnae
ENSBTAG00000017164	LARP4	99	51.866	ENSLOCG00000007113	larp4ab	95	51.828	Lepisosteus_oculatus
ENSBTAG00000017164	LARP4	100	88.435	ENSLAFG00000005160	LARP4	100	88.435	Loxodonta_africana
ENSBTAG00000017164	LARP4	99	88.011	ENSMFAG00000043681	LARP4	98	92.051	Macaca_fascicularis
ENSBTAG00000017164	LARP4	100	87.584	ENSMMUG00000008172	LARP4	98	92.051	Macaca_mulatta
ENSBTAG00000017164	LARP4	92	88.088	ENSMNEG00000034602	LARP4	100	86.165	Macaca_nemestrina
ENSBTAG00000017164	LARP4	87	71.111	ENSMNEG00000037799	-	98	77.596	Macaca_nemestrina
ENSBTAG00000017164	LARP4	100	88.299	ENSMLEG00000039661	LARP4	98	92.051	Mandrillus_leucophaeus
ENSBTAG00000017164	LARP4	99	48.237	ENSMAMG00000011206	larp4aa	95	48.420	Mastacembelus_armatus
ENSBTAG00000017164	LARP4	99	44.661	ENSMAMG00000002616	larp4ab	99	44.661	Mastacembelus_armatus
ENSBTAG00000017164	LARP4	89	60.358	ENSMZEG00005001813	larp4aa	81	60.668	Maylandia_zebra
ENSBTAG00000017164	LARP4	50	57.825	ENSMZEG00005007771	larp4ab	95	58.696	Maylandia_zebra
ENSBTAG00000017164	LARP4	95	68.258	ENSMGAG00000010598	LARP4	93	68.399	Meleagris_gallopavo
ENSBTAG00000017164	LARP4	100	82.313	ENSMICG00000030156	-	100	82.313	Microcebus_murinus
ENSBTAG00000017164	LARP4	87	87.363	ENSMICG00000012388	-	99	87.363	Microcebus_murinus
ENSBTAG00000017164	LARP4	100	83.673	ENSMOCG00000020635	Larp4	100	83.673	Microtus_ochrogaster
ENSBTAG00000017164	LARP4	99	41.592	ENSMMOG00000021861	larp4ab	91	54.696	Mola_mola
ENSBTAG00000017164	LARP4	99	48.077	ENSMMOG00000004785	larp4aa	95	47.564	Mola_mola
ENSBTAG00000017164	LARP4	95	71.961	MGP_CAROLIEiJ_G0020281	Larp4	85	89.697	Mus_caroli
ENSBTAG00000017164	LARP4	100	84.082	ENSMUSG00000023025	Larp4	100	84.524	Mus_musculus
ENSBTAG00000017164	LARP4	100	84.490	MGP_PahariEiJ_G0020284	Larp4	100	84.490	Mus_pahari
ENSBTAG00000017164	LARP4	99	90.834	ENSMPUG00000008706	LARP4	97	90.834	Mustela_putorius_furo
ENSBTAG00000017164	LARP4	100	88.043	ENSMLUG00000012513	-	100	88.043	Myotis_lucifugus
ENSBTAG00000017164	LARP4	100	82.721	ENSNGAG00000001577	-	100	82.721	Nannospalax_galili
ENSBTAG00000017164	LARP4	99	46.962	ENSNBRG00000011292	larp4aa	81	60.668	Neolamprologus_brichardi
ENSBTAG00000017164	LARP4	50	55.405	ENSNBRG00000015675	larp4ab	95	55.956	Neolamprologus_brichardi
ENSBTAG00000017164	LARP4	100	87.755	ENSNLEG00000017798	LARP4	98	91.282	Nomascus_leucogenys
ENSBTAG00000017164	LARP4	66	75.100	ENSOPRG00000004592	-	80	75.100	Ochotona_princeps
ENSBTAG00000017164	LARP4	99	82.240	ENSODEG00000009770	LARP4	100	82.240	Octodon_degus
ENSBTAG00000017164	LARP4	99	48.849	ENSONIG00000011895	larp4aa	99	49.233	Oreochromis_niloticus
ENSBTAG00000017164	LARP4	99	43.969	ENSONIG00000019124	larp4ab	100	43.953	Oreochromis_niloticus
ENSBTAG00000017164	LARP4	71	73.295	ENSOANG00000004373	LARP4	93	73.295	Ornithorhynchus_anatinus
ENSBTAG00000017164	LARP4	100	86.395	ENSOCUG00000021417	-	100	86.395	Oryctolagus_cuniculus
ENSBTAG00000017164	LARP4	100	86.839	ENSOCUG00000026872	-	100	85.482	Oryctolagus_cuniculus
ENSBTAG00000017164	LARP4	99	49.159	ENSORLG00000006758	larp4aa	95	48.446	Oryzias_latipes
ENSBTAG00000017164	LARP4	99	49.288	ENSORLG00015002292	larp4aa	95	48.575	Oryzias_latipes_hsok
ENSBTAG00000017164	LARP4	99	49.471	ENSOMEG00000019749	larp4aa	94	67.324	Oryzias_melastigma
ENSBTAG00000017164	LARP4	71	86.364	ENSOGAG00000001415	LARP4	100	86.364	Otolemur_garnettii
ENSBTAG00000017164	LARP4	100	98.772	ENSOARG00000017702	LARP4	100	98.772	Ovis_aries
ENSBTAG00000017164	LARP4	81	91.645	ENSPPAG00000035100	LARP4	98	91.026	Pan_paniscus
ENSBTAG00000017164	LARP4	63	71.490	ENSPPAG00000039122	-	96	75.772	Pan_paniscus
ENSBTAG00000017164	LARP4	100	91.553	ENSPPRG00000004522	LARP4	100	91.553	Panthera_pardus
ENSBTAG00000017164	LARP4	100	91.553	ENSPTIG00000015617	LARP4	100	91.553	Panthera_tigris_altaica
ENSBTAG00000017164	LARP4	100	87.891	ENSPTRG00000004935	LARP4	98	91.282	Pan_troglodytes
ENSBTAG00000017164	LARP4	63	71.212	ENSPTRG00000045907	-	95	81.564	Pan_troglodytes
ENSBTAG00000017164	LARP4	100	87.719	ENSPANG00000022964	LARP4	98	92.051	Papio_anubis
ENSBTAG00000017164	LARP4	100	48.724	ENSPKIG00000005950	larp4ab	100	47.689	Paramormyrops_kingsleyae
ENSBTAG00000017164	LARP4	99	69.054	ENSPSIG00000015867	LARP4	99	69.054	Pelodiscus_sinensis
ENSBTAG00000017164	LARP4	99	80.027	ENSPEMG00000018433	Larp4	94	86.129	Peromyscus_maniculatus_bairdii
ENSBTAG00000017164	LARP4	100	74.866	ENSPCIG00000000384	LARP4	100	75.269	Phascolarctos_cinereus
ENSBTAG00000017164	LARP4	98	45.204	ENSPFOG00000009764	larp4ab	99	44.692	Poecilia_formosa
ENSBTAG00000017164	LARP4	99	48.404	ENSPFOG00000013148	larp4aa	100	47.563	Poecilia_formosa
ENSBTAG00000017164	LARP4	98	44.901	ENSPLAG00000008502	larp4ab	99	44.430	Poecilia_latipinna
ENSBTAG00000017164	LARP4	98	44.823	ENSPMEG00000002720	larp4ab	99	44.444	Poecilia_mexicana
ENSBTAG00000017164	LARP4	71	89.354	ENSPPYG00000004512	-	100	89.354	Pongo_abelii
ENSBTAG00000017164	LARP4	92	78.971	ENSPCAG00000003671	LARP4	99	78.971	Procavia_capensis
ENSBTAG00000017164	LARP4	88	91.123	ENSPCOG00000026291	LARP4	98	88.213	Propithecus_coquereli
ENSBTAG00000017164	LARP4	92	80.707	ENSPVAG00000016840	LARP4	91	80.707	Pteropus_vampyrus
ENSBTAG00000017164	LARP4	96	49.734	ENSPNAG00000024770	larp4aa	94	50.265	Pygocentrus_nattereri
ENSBTAG00000017164	LARP4	100	46.992	ENSPNAG00000014478	larp4ab	100	48.158	Pygocentrus_nattereri
ENSBTAG00000017164	LARP4	89	77.494	ENSRBIG00000036890	-	100	77.494	Rhinopithecus_bieti
ENSBTAG00000017164	LARP4	93	87.031	ENSRBIG00000038857	-	99	90.909	Rhinopithecus_bieti
ENSBTAG00000017164	LARP4	100	87.314	ENSRROG00000042764	-	99	91.131	Rhinopithecus_roxellana
ENSBTAG00000017164	LARP4	100	78.231	ENSRROG00000025487	-	100	78.231	Rhinopithecus_roxellana
ENSBTAG00000017164	LARP4	100	85.986	ENSSBOG00000026650	LARP4	98	89.744	Saimiri_boliviensis_boliviensis
ENSBTAG00000017164	LARP4	100	50.390	ENSSFOG00015003868	larp4aa	100	49.677	Scleropages_formosus
ENSBTAG00000017164	LARP4	100	47.837	ENSSFOG00015014096	larp4ab	100	49.040	Scleropages_formosus
ENSBTAG00000017164	LARP4	99	46.795	ENSSMAG00000002838	larp4ab	99	47.247	Scophthalmus_maximus
ENSBTAG00000017164	LARP4	99	45.935	ENSSDUG00000006655	larp4ab	99	45.207	Seriola_dumerili
ENSBTAG00000017164	LARP4	99	46.778	ENSSLDG00000001791	larp4ab	99	46.164	Seriola_lalandi_dorsalis
ENSBTAG00000017164	LARP4	99	81.199	ENSSARG00000012469	LARP4	100	81.199	Sorex_araneus
ENSBTAG00000017164	LARP4	95	66.713	ENSSPUG00000016552	LARP4	93	67.133	Sphenodon_punctatus
ENSBTAG00000017164	LARP4	99	45.866	ENSSPAG00000002172	larp4ab	99	45.278	Stegastes_partitus
ENSBTAG00000017164	LARP4	99	47.889	ENSSPAG00000007222	larp4aa	99	61.842	Stegastes_partitus
ENSBTAG00000017164	LARP4	100	91.689	ENSSSCG00000028516	LARP4	100	91.689	Sus_scrofa
ENSBTAG00000017164	LARP4	99	67.833	ENSTGUG00000003479	LARP4	100	68.102	Taeniopygia_guttata
ENSBTAG00000017164	LARP4	70	51.331	ENSTRUG00000007206	larp4ab	84	63.056	Takifugu_rubripes
ENSBTAG00000017164	LARP4	50	59.079	ENSTRUG00000015939	larp4aa	100	59.079	Takifugu_rubripes
ENSBTAG00000017164	LARP4	99	45.033	ENSTNIG00000014571	larp4ab	99	45.225	Tetraodon_nigroviridis
ENSBTAG00000017164	LARP4	99	48.114	ENSTNIG00000015109	larp4aa	50	59.391	Tetraodon_nigroviridis
ENSBTAG00000017164	LARP4	99	75.886	ENSTBEG00000005167	LARP4	100	75.886	Tupaia_belangeri
ENSBTAG00000017164	LARP4	99	91.057	ENSTTRG00000003764	LARP4	99	91.057	Tursiops_truncatus
ENSBTAG00000017164	LARP4	72	91.651	ENSUAMG00000013764	LARP4	99	92.889	Ursus_americanus
ENSBTAG00000017164	LARP4	100	90.872	ENSUMAG00000008473	LARP4	100	90.872	Ursus_maritimus
ENSBTAG00000017164	LARP4	99	90.405	ENSVPAG00000010136	LARP4	100	90.405	Vicugna_pacos
ENSBTAG00000017164	LARP4	100	90.463	ENSVVUG00000024717	LARP4	100	90.561	Vulpes_vulpes
ENSBTAG00000017164	LARP4	92	59.040	ENSXETG00000007283	larp4	100	58.898	Xenopus_tropicalis
ENSBTAG00000017164	LARP4	99	47.882	ENSXCOG00000006387	larp4aa	95	48.391	Xiphophorus_couchianus
ENSBTAG00000017164	LARP4	99	49.361	ENSXMAG00000010519	larp4aa	95	49.936	Xiphophorus_maculatus
ENSBTAG00000017164	LARP4	98	45.335	ENSXMAG00000002156	larp4ab	99	44.692	Xiphophorus_maculatus