EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000017362 (Gene tree)
Gene ID: 534707
Gene Symbol: CNOT6
Alias: -
Full Name: Bos taurus CCR4-NOT transcription complex subunit 6 (CNOT6)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 81008 bases
Position: chr7:587310-668317
Accession: NM_001101161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000023088	Exo_endo_phos	PF03372.23	1.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000023088	-	3519	-	ENSBTAP00000023088	557 (aa)	-	A6QR51

Gene Model

Click here to download ENSBTAG00000017362's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000017362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000017362	CNOT6	100	78.995	ENSBTAG00000049571	CNOT6L	99	78.995

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000017362	CNOT6	100	97.487	ENSG00000113300	CNOT6	100	97.487	Homo_sapiens
ENSBTAG00000017362	CNOT6	100	87.299	ENSAPOG00000009994	cnot6b	100	87.299	Acanthochromis_polyacanthus
ENSBTAG00000017362	CNOT6	100	98.569	ENSAMEG00000000949	CNOT6	99	98.569	Ailuropoda_melanoleuca
ENSBTAG00000017362	CNOT6	100	86.047	ENSACIG00000016566	cnot6b	100	86.047	Amphilophus_citrinellus
ENSBTAG00000017362	CNOT6	100	87.299	ENSAOCG00000006893	cnot6b	100	87.299	Amphiprion_ocellaris
ENSBTAG00000017362	CNOT6	100	87.299	ENSAPEG00000016949	cnot6b	100	87.299	Amphiprion_percula
ENSBTAG00000017362	CNOT6	100	85.152	ENSATEG00000007862	cnot6b	100	85.152	Anabas_testudineus
ENSBTAG00000017362	CNOT6	100	96.050	ENSAPLG00000012715	CNOT6	99	96.050	Anas_platyrhynchos
ENSBTAG00000017362	CNOT6	100	93.716	ENSACAG00000016548	CNOT6	100	93.716	Anolis_carolinensis
ENSBTAG00000017362	CNOT6	100	97.666	ENSANAG00000030436	CNOT6	96	97.666	Aotus_nancymaae
ENSBTAG00000017362	CNOT6	100	85.152	ENSACLG00000008279	cnot6b	100	86.047	Astatotilapia_calliptera
ENSBTAG00000017362	CNOT6	100	85.484	ENSAMXG00000034694	cnot6b	100	85.484	Astyanax_mexicanus
ENSBTAG00000017362	CNOT6	100	86.738	ENSAMXG00000019140	cnot6a	100	86.738	Astyanax_mexicanus
ENSBTAG00000017362	CNOT6	100	97.487	ENSCJAG00000009795	CNOT6	100	97.487	Callithrix_jacchus
ENSBTAG00000017362	CNOT6	100	98.923	ENSCAFG00000000464	CNOT6	100	98.923	Canis_familiaris
ENSBTAG00000017362	CNOT6	100	98.923	ENSCAFG00020002441	CNOT6	100	98.923	Canis_lupus_dingo
ENSBTAG00000017362	CNOT6	100	99.102	ENSCHIG00000019100	CNOT6	100	99.102	Capra_hircus
ENSBTAG00000017362	CNOT6	100	96.050	ENSTSYG00000003982	CNOT6	100	96.050	Carlito_syrichta
ENSBTAG00000017362	CNOT6	100	92.460	ENSCPOG00000035657	CNOT6	100	92.460	Cavia_porcellus
ENSBTAG00000017362	CNOT6	100	92.998	ENSCCAG00000033670	CNOT6	100	92.998	Cebus_capucinus
ENSBTAG00000017362	CNOT6	100	97.487	ENSCATG00000042014	CNOT6	100	97.487	Cercocebus_atys
ENSBTAG00000017362	CNOT6	100	96.230	ENSCLAG00000010489	CNOT6	100	96.230	Chinchilla_lanigera
ENSBTAG00000017362	CNOT6	100	97.487	ENSCSAG00000008165	CNOT6	100	97.487	Chlorocebus_sabaeus
ENSBTAG00000017362	CNOT6	100	96.768	ENSCHOG00000009680	CNOT6	100	96.768	Choloepus_hoffmanni
ENSBTAG00000017362	CNOT6	100	95.332	ENSCPBG00000008908	CNOT6	100	95.332	Chrysemys_picta_bellii
ENSBTAG00000017362	CNOT6	100	97.666	ENSCANG00000026756	CNOT6	100	97.666	Colobus_angolensis_palliatus
ENSBTAG00000017362	CNOT6	100	95.512	ENSCGRG00001011452	Cnot6	100	95.512	Cricetulus_griseus_chok1gshd
ENSBTAG00000017362	CNOT6	100	93.896	ENSCGRG00000010407	Cnot6	100	93.896	Cricetulus_griseus_crigri
ENSBTAG00000017362	CNOT6	100	86.225	ENSCSEG00000010939	cnot6b	100	86.225	Cynoglossus_semilaevis
ENSBTAG00000017362	CNOT6	100	85.663	ENSCVAG00000010538	cnot6b	100	85.663	Cyprinodon_variegatus
ENSBTAG00000017362	CNOT6	100	86.738	ENSDARG00000008255	cnot6a	100	86.738	Danio_rerio
ENSBTAG00000017362	CNOT6	100	84.409	ENSDARG00000101072	cnot6b	100	84.409	Danio_rerio
ENSBTAG00000017362	CNOT6	100	97.487	ENSDNOG00000041644	CNOT6	100	97.487	Dasypus_novemcinctus
ENSBTAG00000017362	CNOT6	100	86.535	ENSDORG00000001708	Cnot6	100	86.535	Dipodomys_ordii
ENSBTAG00000017362	CNOT6	100	77.818	ENSETEG00000006975	CNOT6	100	77.818	Echinops_telfairi
ENSBTAG00000017362	CNOT6	100	98.025	ENSEASG00005012794	-	100	98.025	Equus_asinus_asinus
ENSBTAG00000017362	CNOT6	90	92.800	ENSEASG00005012957	-	99	92.800	Equus_asinus_asinus
ENSBTAG00000017362	CNOT6	100	92.101	ENSECAG00000012704	-	99	92.101	Equus_caballus
ENSBTAG00000017362	CNOT6	100	98.743	ENSECAG00000019325	CNOT6	100	98.743	Equus_caballus
ENSBTAG00000017362	CNOT6	100	97.127	ENSEEUG00000015382	CNOT6	100	97.127	Erinaceus_europaeus
ENSBTAG00000017362	CNOT6	100	82.258	ENSELUG00000024580	cnot6a	100	82.258	Esox_lucius
ENSBTAG00000017362	CNOT6	100	83.598	ENSELUG00000015981	cnot6b	99	83.598	Esox_lucius
ENSBTAG00000017362	CNOT6	100	98.923	ENSFCAG00000001881	CNOT6	100	98.923	Felis_catus
ENSBTAG00000017362	CNOT6	100	96.230	ENSFALG00000007699	CNOT6	100	96.230	Ficedula_albicollis
ENSBTAG00000017362	CNOT6	100	96.050	ENSFDAG00000001999	CNOT6	100	96.050	Fukomys_damarensis
ENSBTAG00000017362	CNOT6	68	84.326	ENSFHEG00000013756	cnot6b	94	89.744	Fundulus_heteroclitus
ENSBTAG00000017362	CNOT6	95	85.444	ENSGMOG00000009767	cnot6b	99	85.444	Gadus_morhua
ENSBTAG00000017362	CNOT6	100	96.230	ENSGALG00000034316	CNOT6	100	96.230	Gallus_gallus
ENSBTAG00000017362	CNOT6	100	85.842	ENSGAFG00000008525	cnot6b	100	85.842	Gambusia_affinis
ENSBTAG00000017362	CNOT6	95	83.365	ENSGACG00000018046	cnot6b	99	83.365	Gasterosteus_aculeatus
ENSBTAG00000017362	CNOT6	100	79.533	ENSGAGG00000012176	CNOT6	100	79.533	Gopherus_agassizii
ENSBTAG00000017362	CNOT6	100	97.487	ENSGGOG00000003675	CNOT6	100	97.487	Gorilla_gorilla
ENSBTAG00000017362	CNOT6	100	85.331	ENSHBUG00000002819	cnot6b	100	86.225	Haplochromis_burtoni
ENSBTAG00000017362	CNOT6	100	96.409	ENSHGLG00000017756	CNOT6	100	96.409	Heterocephalus_glaber_female
ENSBTAG00000017362	CNOT6	100	96.409	ENSHGLG00100005747	CNOT6	100	96.409	Heterocephalus_glaber_male
ENSBTAG00000017362	CNOT6	100	83.900	ENSHCOG00000016176	cnot6b	100	84.794	Hippocampus_comes
ENSBTAG00000017362	CNOT6	100	84.588	ENSIPUG00000017482	cnot6b	100	84.588	Ictalurus_punctatus
ENSBTAG00000017362	CNOT6	100	85.663	ENSIPUG00000019831	cnot6a	100	85.663	Ictalurus_punctatus
ENSBTAG00000017362	CNOT6	100	97.307	ENSSTOG00000002803	CNOT6	100	97.307	Ictidomys_tridecemlineatus
ENSBTAG00000017362	CNOT6	100	95.512	ENSJJAG00000012296	Cnot6	100	95.512	Jaculus_jaculus
ENSBTAG00000017362	CNOT6	100	87.097	ENSKMAG00000004640	cnot6b	100	87.097	Kryptolebias_marmoratus
ENSBTAG00000017362	CNOT6	100	84.258	ENSLBEG00000027917	cnot6b	100	85.152	Labrus_bergylta
ENSBTAG00000017362	CNOT6	100	90.143	ENSLOCG00000010102	cnot6b	99	90.143	Lepisosteus_oculatus
ENSBTAG00000017362	CNOT6	100	98.025	ENSLAFG00000016742	CNOT6	100	98.025	Loxodonta_africana
ENSBTAG00000017362	CNOT6	100	97.487	ENSMFAG00000030867	CNOT6	100	97.487	Macaca_fascicularis
ENSBTAG00000017362	CNOT6	100	97.487	ENSMMUG00000018690	CNOT6	100	97.487	Macaca_mulatta
ENSBTAG00000017362	CNOT6	100	97.487	ENSMNEG00000038565	CNOT6	100	97.487	Macaca_nemestrina
ENSBTAG00000017362	CNOT6	100	97.487	ENSMLEG00000010555	CNOT6	100	97.487	Mandrillus_leucophaeus
ENSBTAG00000017362	CNOT6	100	87.299	ENSMAMG00000007515	cnot6b	100	87.299	Mastacembelus_armatus
ENSBTAG00000017362	CNOT6	100	85.152	ENSMZEG00005012899	cnot6b	100	86.047	Maylandia_zebra
ENSBTAG00000017362	CNOT6	100	96.589	ENSMAUG00000019798	Cnot6	100	96.589	Mesocricetus_auratus
ENSBTAG00000017362	CNOT6	100	95.871	ENSMICG00000013018	-	100	95.871	Microcebus_murinus
ENSBTAG00000017362	CNOT6	98	87.132	ENSMICG00000028378	-	99	87.132	Microcebus_murinus
ENSBTAG00000017362	CNOT6	100	96.589	ENSMOCG00000021662	Cnot6	100	96.589	Microtus_ochrogaster
ENSBTAG00000017362	CNOT6	100	84.229	ENSMMOG00000003227	cnot6b	100	84.229	Mola_mola
ENSBTAG00000017362	CNOT6	100	96.589	ENSMODG00000003979	CNOT6	100	96.589	Monodelphis_domestica
ENSBTAG00000017362	CNOT6	100	86.941	ENSMALG00000014251	cnot6b	100	86.941	Monopterus_albus
ENSBTAG00000017362	CNOT6	100	96.768	MGP_CAROLIEiJ_G0016277	Cnot6	100	96.768	Mus_caroli
ENSBTAG00000017362	CNOT6	100	96.768	ENSMUSG00000020362	Cnot6	100	96.768	Mus_musculus
ENSBTAG00000017362	CNOT6	100	96.768	MGP_PahariEiJ_G0017413	Cnot6	100	96.768	Mus_pahari
ENSBTAG00000017362	CNOT6	100	96.409	MGP_SPRETEiJ_G0017122	Cnot6	100	96.409	Mus_spretus
ENSBTAG00000017362	CNOT6	100	98.743	ENSMPUG00000000587	CNOT6	96	98.743	Mustela_putorius_furo
ENSBTAG00000017362	CNOT6	100	96.085	ENSMLUG00000010257	CNOT6	100	96.085	Myotis_lucifugus
ENSBTAG00000017362	CNOT6	100	95.512	ENSNGAG00000008269	Cnot6	100	95.512	Nannospalax_galili
ENSBTAG00000017362	CNOT6	100	85.331	ENSNBRG00000010798	cnot6b	100	86.225	Neolamprologus_brichardi
ENSBTAG00000017362	CNOT6	100	96.050	ENSNLEG00000002322	CNOT6	100	96.050	Nomascus_leucogenys
ENSBTAG00000017362	CNOT6	81	97.196	ENSMEUG00000000025	CNOT6	81	97.196	Notamacropus_eugenii
ENSBTAG00000017362	CNOT6	88	95.943	ENSOPRG00000008244	-	88	95.943	Ochotona_princeps
ENSBTAG00000017362	CNOT6	100	95.512	ENSODEG00000007041	CNOT6	100	95.512	Octodon_degus
ENSBTAG00000017362	CNOT6	75	85.343	ENSONIG00000013027	cnot6b	99	85.343	Oreochromis_niloticus
ENSBTAG00000017362	CNOT6	100	94.973	ENSOANG00000010226	CNOT6	100	94.973	Ornithorhynchus_anatinus
ENSBTAG00000017362	CNOT6	100	96.601	ENSOCUG00000011083	CNOT6	100	96.601	Oryctolagus_cuniculus
ENSBTAG00000017362	CNOT6	100	85.689	ENSORLG00000005059	cnot6b	100	85.689	Oryzias_latipes
ENSBTAG00000017362	CNOT6	100	85.689	ENSORLG00020012784	cnot6b	100	85.689	Oryzias_latipes_hni
ENSBTAG00000017362	CNOT6	94	85.086	ENSORLG00015022658	cnot6b	98	85.086	Oryzias_latipes_hsok
ENSBTAG00000017362	CNOT6	100	85.868	ENSOMEG00000005295	cnot6b	100	85.868	Oryzias_melastigma
ENSBTAG00000017362	CNOT6	94	97.328	ENSOGAG00000032470	CNOT6	100	97.328	Otolemur_garnettii
ENSBTAG00000017362	CNOT6	97	98.893	ENSOARG00000001003	CNOT6	100	98.893	Ovis_aries
ENSBTAG00000017362	CNOT6	100	97.487	ENSPPAG00000032253	CNOT6	100	97.487	Pan_paniscus
ENSBTAG00000017362	CNOT6	100	98.743	ENSPPRG00000011912	CNOT6	100	98.743	Panthera_pardus
ENSBTAG00000017362	CNOT6	100	98.743	ENSPTIG00000016794	CNOT6	100	98.743	Panthera_tigris_altaica
ENSBTAG00000017362	CNOT6	100	97.487	ENSPTRG00000017636	CNOT6	100	97.487	Pan_troglodytes
ENSBTAG00000017362	CNOT6	100	97.487	ENSPANG00000016191	CNOT6	100	97.487	Papio_anubis
ENSBTAG00000017362	CNOT6	100	87.097	ENSPKIG00000021368	cnot6b	100	87.097	Paramormyrops_kingsleyae
ENSBTAG00000017362	CNOT6	98	95.772	ENSPSIG00000017307	CNOT6	100	95.772	Pelodiscus_sinensis
ENSBTAG00000017362	CNOT6	100	85.868	ENSPMGG00000011238	cnot6b	100	85.868	Periophthalmus_magnuspinnatus
ENSBTAG00000017362	CNOT6	100	95.512	ENSPEMG00000000627	Cnot6	100	95.512	Peromyscus_maniculatus_bairdii
ENSBTAG00000017362	CNOT6	100	96.409	ENSPCIG00000020319	CNOT6	99	96.409	Phascolarctos_cinereus
ENSBTAG00000017362	CNOT6	100	85.663	ENSPFOG00000006291	cnot6b	100	85.663	Poecilia_formosa
ENSBTAG00000017362	CNOT6	100	82.079	ENSPLAG00000008266	cnot6b	100	82.079	Poecilia_latipinna
ENSBTAG00000017362	CNOT6	100	85.842	ENSPMEG00000009091	cnot6b	100	85.842	Poecilia_mexicana
ENSBTAG00000017362	CNOT6	100	84.588	ENSPREG00000003713	cnot6b	100	84.588	Poecilia_reticulata
ENSBTAG00000017362	CNOT6	100	97.487	ENSPPYG00000016137	CNOT6	100	97.487	Pongo_abelii
ENSBTAG00000017362	CNOT6	71	96.992	ENSPCAG00000005599	-	71	96.992	Procavia_capensis
ENSBTAG00000017362	CNOT6	100	91.741	ENSPCOG00000017359	CNOT6	100	92.460	Propithecus_coquereli
ENSBTAG00000017362	CNOT6	100	93.178	ENSPVAG00000003069	CNOT6	100	93.178	Pteropus_vampyrus
ENSBTAG00000017362	CNOT6	100	84.973	ENSPNYG00000000321	cnot6b	100	85.868	Pundamilia_nyererei
ENSBTAG00000017362	CNOT6	100	85.484	ENSPNAG00000028816	cnot6b	100	85.484	Pygocentrus_nattereri
ENSBTAG00000017362	CNOT6	100	86.918	ENSPNAG00000029586	cnot6a	100	86.918	Pygocentrus_nattereri
ENSBTAG00000017362	CNOT6	100	95.871	ENSRNOG00000054891	Cnot6	100	95.871	Rattus_norvegicus
ENSBTAG00000017362	CNOT6	100	97.307	ENSRBIG00000004309	CNOT6	100	97.307	Rhinopithecus_bieti
ENSBTAG00000017362	CNOT6	100	97.307	ENSRROG00000035378	CNOT6	100	97.619	Rhinopithecus_roxellana
ENSBTAG00000017362	CNOT6	100	97.487	ENSSBOG00000030494	CNOT6	100	97.487	Saimiri_boliviensis_boliviensis
ENSBTAG00000017362	CNOT6	100	96.409	ENSSHAG00000017436	CNOT6	100	96.409	Sarcophilus_harrisii
ENSBTAG00000017362	CNOT6	100	86.201	ENSSFOG00015022383	cnot6a	96	86.201	Scleropages_formosus
ENSBTAG00000017362	CNOT6	100	88.351	ENSSFOG00015015133	CNOT6	100	88.351	Scleropages_formosus
ENSBTAG00000017362	CNOT6	100	85.152	ENSSMAG00000003084	cnot6b	100	85.152	Scophthalmus_maximus
ENSBTAG00000017362	CNOT6	100	86.762	ENSSDUG00000004151	cnot6b	100	86.762	Seriola_dumerili
ENSBTAG00000017362	CNOT6	100	86.047	ENSSLDG00000004448	cnot6b	100	86.941	Seriola_lalandi_dorsalis
ENSBTAG00000017362	CNOT6	64	77.654	ENSSARG00000012650	-	100	77.654	Sorex_araneus
ENSBTAG00000017362	CNOT6	100	94.973	ENSSPUG00000007893	CNOT6	100	94.973	Sphenodon_punctatus
ENSBTAG00000017362	CNOT6	100	87.120	ENSSPAG00000000149	cnot6b	100	87.120	Stegastes_partitus
ENSBTAG00000017362	CNOT6	100	99.102	ENSSSCG00000014009	CNOT6	100	99.351	Sus_scrofa
ENSBTAG00000017362	CNOT6	100	95.871	ENSTGUG00000001119	CNOT6	100	95.871	Taeniopygia_guttata
ENSBTAG00000017362	CNOT6	100	84.381	ENSTRUG00000002818	cnot6b	100	84.381	Takifugu_rubripes
ENSBTAG00000017362	CNOT6	100	84.740	ENSTNIG00000004443	cnot6b	99	84.740	Tetraodon_nigroviridis
ENSBTAG00000017362	CNOT6	87	67.351	ENSTBEG00000017094	-	100	67.351	Tupaia_belangeri
ENSBTAG00000017362	CNOT6	100	99.282	ENSTTRG00000009363	CNOT6	100	99.282	Tursiops_truncatus
ENSBTAG00000017362	CNOT6	77	99.068	ENSUAMG00000004579	CNOT6	88	99.068	Ursus_americanus
ENSBTAG00000017362	CNOT6	100	94.178	ENSUMAG00000024577	CNOT6	100	94.178	Ursus_maritimus
ENSBTAG00000017362	CNOT6	83	97.664	ENSVPAG00000003593	CNOT6	83	97.664	Vicugna_pacos
ENSBTAG00000017362	CNOT6	100	98.923	ENSVVUG00000026940	CNOT6	100	98.923	Vulpes_vulpes
ENSBTAG00000017362	CNOT6	100	82.437	ENSXCOG00000003360	cnot6b	100	82.437	Xiphophorus_couchianus
ENSBTAG00000017362	CNOT6	100	85.842	ENSXMAG00000008730	cnot6b	100	85.842	Xiphophorus_maculatus