EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000017528 (Gene tree)
Gene ID: 526694
Gene Symbol: SNAI3
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 8266 bases
Position: chr18:13911498-13919763
Accession: 35049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000023305	zf-C2H2	PF00096.26	1.9e-21	1	3
ENSBTAP00000023305	zf-C2H2	PF00096.26	1.9e-21	2	3
ENSBTAP00000023305	zf-C2H2	PF00096.26	1.9e-21	3	3
ENSBTAP00000023305	zf-met	PF12874.7	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000023305	-	2865	XM_005218623	ENSBTAP00000023305	291 (aa)	XP_005218680	E1BH01

Gene Model

Click here to download ENSBTAG00000017528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000017528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000017528	SNAI3	99	47.619	ENSBTAG00000013227	SNAI2	99	46.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000017528	SNAI3	99	46.575	ENSG00000019549	SNAI2	99	44.554	Homo_sapiens
ENSBTAG00000017528	SNAI3	99	72.260	ENSG00000185669	SNAI3	99	72.260	Homo_sapiens
ENSBTAG00000017528	SNAI3	99	45.033	ENSAMEG00000009606	SNAI2	99	45.455	Ailuropoda_melanoleuca
ENSBTAG00000017528	SNAI3	99	46.599	ENSANAG00000021163	SNAI2	99	45.918	Aotus_nancymaae
ENSBTAG00000017528	SNAI3	99	71.575	ENSANAG00000032748	SNAI3	99	71.575	Aotus_nancymaae
ENSBTAG00000017528	SNAI3	99	46.575	ENSCJAG00000013499	SNAI2	99	44.554	Callithrix_jacchus
ENSBTAG00000017528	SNAI3	99	45.364	ENSCAFG00000006638	SNAI2	99	44.702	Canis_familiaris
ENSBTAG00000017528	SNAI3	99	72.945	ENSCAFG00000029458	SNAI3	99	72.945	Canis_familiaris
ENSBTAG00000017528	SNAI3	99	72.945	ENSCAFG00020004719	SNAI3	99	72.945	Canis_lupus_dingo
ENSBTAG00000017528	SNAI3	99	45.364	ENSCAFG00020015384	SNAI2	99	44.702	Canis_lupus_dingo
ENSBTAG00000017528	SNAI3	100	96.564	ENSCHIG00000018087	SNAI3	100	96.564	Capra_hircus
ENSBTAG00000017528	SNAI3	99	47.619	ENSCHIG00000024410	SNAI2	99	46.939	Capra_hircus
ENSBTAG00000017528	SNAI3	90	69.549	ENSTSYG00000025594	SNAI3	90	69.549	Carlito_syrichta
ENSBTAG00000017528	SNAI3	99	46.575	ENSCCAG00000024100	SNAI2	99	44.554	Cebus_capucinus
ENSBTAG00000017528	SNAI3	99	46.575	ENSCATG00000028656	SNAI2	99	44.554	Cercocebus_atys
ENSBTAG00000017528	SNAI3	99	71.575	ENSCATG00000031714	SNAI3	99	71.575	Cercocebus_atys
ENSBTAG00000017528	SNAI3	99	45.033	ENSCLAG00000011797	SNAI2	99	45.608	Chinchilla_lanigera
ENSBTAG00000017528	SNAI3	99	66.438	ENSCSAG00000003047	SNAI3	99	66.438	Chlorocebus_sabaeus
ENSBTAG00000017528	SNAI3	99	46.575	ENSCSAG00000014787	SNAI2	99	44.554	Chlorocebus_sabaeus
ENSBTAG00000017528	SNAI3	99	47.841	ENSCPBG00000020255	SNAI2	99	45.608	Chrysemys_picta_bellii
ENSBTAG00000017528	SNAI3	99	60.943	ENSCPBG00000023474	SNAI3	99	60.943	Chrysemys_picta_bellii
ENSBTAG00000017528	SNAI3	92	70.111	ENSCANG00000031124	SNAI3	82	70.111	Colobus_angolensis_palliatus
ENSBTAG00000017528	SNAI3	99	46.575	ENSCANG00000029656	SNAI2	99	44.554	Colobus_angolensis_palliatus
ENSBTAG00000017528	SNAI3	99	45.033	ENSCGRG00001013674	Snai2	99	45.455	Cricetulus_griseus_chok1gshd
ENSBTAG00000017528	SNAI3	99	67.128	ENSCGRG00001011389	Snai3	99	68.166	Cricetulus_griseus_chok1gshd
ENSBTAG00000017528	SNAI3	99	45.033	ENSCGRG00000012119	Snai2	99	45.455	Cricetulus_griseus_crigri
ENSBTAG00000017528	SNAI3	99	67.128	ENSCGRG00000014932	Snai3	99	68.166	Cricetulus_griseus_crigri
ENSBTAG00000017528	SNAI3	80	52.066	ENSDNOG00000035204	-	100	52.479	Dasypus_novemcinctus
ENSBTAG00000017528	SNAI3	99	45.455	ENSDORG00000029620	Snai2	99	44.781	Dipodomys_ordii
ENSBTAG00000017528	SNAI3	91	72.285	ENSEASG00005000614	SNAI3	87	72.285	Equus_asinus_asinus
ENSBTAG00000017528	SNAI3	99	73.630	ENSECAG00000012131	SNAI3	99	73.630	Equus_caballus
ENSBTAG00000017528	SNAI3	99	63.014	ENSEEUG00000000841	SNAI3	99	63.014	Erinaceus_europaeus
ENSBTAG00000017528	SNAI3	99	48.013	ENSELUG00000018742	-	99	47.241	Esox_lucius
ENSBTAG00000017528	SNAI3	99	45.361	ENSELUG00000021795	SNAI2	79	45.361	Esox_lucius
ENSBTAG00000017528	SNAI3	99	68.729	ENSFCAG00000043885	SNAI3	99	68.729	Felis_catus
ENSBTAG00000017528	SNAI3	99	45.033	ENSFDAG00000016958	SNAI2	99	45.455	Fukomys_damarensis
ENSBTAG00000017528	SNAI3	99	47.841	ENSGAGG00000000426	SNAI2	99	45.608	Gopherus_agassizii
ENSBTAG00000017528	SNAI3	99	60.269	ENSGAGG00000023571	SNAI3	99	60.269	Gopherus_agassizii
ENSBTAG00000017528	SNAI3	99	72.603	ENSGGOG00000012559	SNAI3	99	72.603	Gorilla_gorilla
ENSBTAG00000017528	SNAI3	99	46.575	ENSGGOG00000000959	SNAI2	99	44.554	Gorilla_gorilla
ENSBTAG00000017528	SNAI3	99	45.085	ENSHCOG00000019435	SNAI2	99	45.085	Hippocampus_comes
ENSBTAG00000017528	SNAI3	99	46.622	ENSIPUG00000000131	snai2	99	46.284	Ictalurus_punctatus
ENSBTAG00000017528	SNAI3	99	45.033	ENSSTOG00000028743	SNAI2	99	45.455	Ictidomys_tridecemlineatus
ENSBTAG00000017528	SNAI3	99	67.347	ENSJJAG00000019934	Snai3	99	67.347	Jaculus_jaculus
ENSBTAG00000017528	SNAI3	99	46.284	ENSLOCG00000005992	SNAI2	99	46.284	Lepisosteus_oculatus
ENSBTAG00000017528	SNAI3	99	70.103	ENSLAFG00000005117	SNAI3	99	70.103	Loxodonta_africana
ENSBTAG00000017528	SNAI3	99	45.033	ENSLAFG00000009299	SNAI2	99	46.259	Loxodonta_africana
ENSBTAG00000017528	SNAI3	99	72.945	ENSMFAG00000032064	SNAI3	99	72.945	Macaca_fascicularis
ENSBTAG00000017528	SNAI3	99	46.575	ENSMFAG00000046061	SNAI2	99	44.554	Macaca_fascicularis
ENSBTAG00000017528	SNAI3	99	46.575	ENSMMUG00000016195	SNAI2	99	44.554	Macaca_mulatta
ENSBTAG00000017528	SNAI3	99	72.945	ENSMMUG00000008716	SNAI3	99	72.945	Macaca_mulatta
ENSBTAG00000017528	SNAI3	99	72.945	ENSMNEG00000045515	SNAI3	99	72.945	Macaca_nemestrina
ENSBTAG00000017528	SNAI3	99	46.575	ENSMNEG00000034216	SNAI2	99	44.554	Macaca_nemestrina
ENSBTAG00000017528	SNAI3	92	69.630	ENSMLEG00000033191	SNAI3	91	69.630	Mandrillus_leucophaeus
ENSBTAG00000017528	SNAI3	99	46.575	ENSMLEG00000034407	SNAI2	99	44.554	Mandrillus_leucophaeus
ENSBTAG00000017528	SNAI3	99	45.033	ENSMAUG00000008119	Snai2	99	45.455	Mesocricetus_auratus
ENSBTAG00000017528	SNAI3	99	67.474	ENSMAUG00000001685	Snai3	99	67.474	Mesocricetus_auratus
ENSBTAG00000017528	SNAI3	99	67.466	ENSMOCG00000003536	Snai3	99	67.466	Microtus_ochrogaster
ENSBTAG00000017528	SNAI3	99	46.465	ENSMOCG00000006622	Snai2	99	45.791	Microtus_ochrogaster
ENSBTAG00000017528	SNAI3	99	47.619	ENSMODG00000010173	SNAI2	99	47.279	Monodelphis_domestica
ENSBTAG00000017528	SNAI3	99	65.052	MGP_CAROLIEiJ_G0031662	Snai3	99	65.052	Mus_caroli
ENSBTAG00000017528	SNAI3	99	45.875	MGP_CAROLIEiJ_G0020483	Snai2	99	45.638	Mus_caroli
ENSBTAG00000017528	SNAI3	99	66.090	ENSMUSG00000006587	Snai3	99	66.090	Mus_musculus
ENSBTAG00000017528	SNAI3	99	46.622	ENSMUSG00000022676	Snai2	99	45.270	Mus_musculus
ENSBTAG00000017528	SNAI3	99	45.875	MGP_PahariEiJ_G0016188	Snai2	99	45.638	Mus_pahari
ENSBTAG00000017528	SNAI3	99	66.552	MGP_PahariEiJ_G0023260	Snai3	99	66.552	Mus_pahari
ENSBTAG00000017528	SNAI3	99	45.875	MGP_SPRETEiJ_G0021379	Snai2	99	44.554	Mus_spretus
ENSBTAG00000017528	SNAI3	99	66.090	MGP_SPRETEiJ_G0032780	Snai3	99	66.090	Mus_spretus
ENSBTAG00000017528	SNAI3	99	67.128	ENSMPUG00000008104	SNAI3	99	67.128	Mustela_putorius_furo
ENSBTAG00000017528	SNAI3	99	45.033	ENSMPUG00000010793	SNAI2	99	45.455	Mustela_putorius_furo
ENSBTAG00000017528	SNAI3	99	45.033	ENSMLUG00000001086	SNAI2	99	44.371	Myotis_lucifugus
ENSBTAG00000017528	SNAI3	99	69.521	ENSNGAG00000023039	Snai3	99	69.521	Nannospalax_galili
ENSBTAG00000017528	SNAI3	99	46.575	ENSNLEG00000013421	SNAI2	99	44.884	Nomascus_leucogenys
ENSBTAG00000017528	SNAI3	99	72.603	ENSNLEG00000000595	SNAI3	99	72.603	Nomascus_leucogenys
ENSBTAG00000017528	SNAI3	98	47.405	ENSMEUG00000009510	SNAI2	100	47.059	Notamacropus_eugenii
ENSBTAG00000017528	SNAI3	99	46.259	ENSOANG00000007267	SNAI2	99	45.578	Ornithorhynchus_anatinus
ENSBTAG00000017528	SNAI3	99	69.863	ENSOGAG00000000419	SNAI3	99	70.890	Otolemur_garnettii
ENSBTAG00000017528	SNAI3	99	47.619	ENSOARG00000013030	SNAI2	99	46.939	Ovis_aries
ENSBTAG00000017528	SNAI3	91	71.691	ENSOARG00000013069	-	100	71.691	Ovis_aries
ENSBTAG00000017528	SNAI3	99	72.260	ENSPPAG00000043301	SNAI3	99	72.260	Pan_paniscus
ENSBTAG00000017528	SNAI3	99	46.575	ENSPPAG00000015662	SNAI2	99	44.554	Pan_paniscus
ENSBTAG00000017528	SNAI3	99	68.041	ENSPPRG00000008511	SNAI3	99	68.041	Panthera_pardus
ENSBTAG00000017528	SNAI3	99	46.026	ENSPPRG00000012562	-	99	45.364	Panthera_pardus
ENSBTAG00000017528	SNAI3	99	71.918	ENSPTRG00000008460	SNAI3	99	71.918	Pan_troglodytes
ENSBTAG00000017528	SNAI3	99	46.575	ENSPTRG00000020235	SNAI2	99	44.554	Pan_troglodytes
ENSBTAG00000017528	SNAI3	99	46.575	ENSPANG00000017540	SNAI2	99	44.554	Papio_anubis
ENSBTAG00000017528	SNAI3	99	72.260	ENSPANG00000000509	SNAI3	99	72.260	Papio_anubis
ENSBTAG00000017528	SNAI3	99	45.484	ENSPKIG00000007872	SNAI3	99	44.516	Paramormyrops_kingsleyae
ENSBTAG00000017528	SNAI3	99	46.780	ENSPKIG00000002254	SNAI2	99	46.512	Paramormyrops_kingsleyae
ENSBTAG00000017528	SNAI3	76	58.798	ENSPSIG00000004262	SNAI3	90	58.798	Pelodiscus_sinensis
ENSBTAG00000017528	SNAI3	99	48.000	ENSPSIG00000016395	SNAI2	99	45.763	Pelodiscus_sinensis
ENSBTAG00000017528	SNAI3	99	45.033	ENSPEMG00000011739	Snai2	99	46.128	Peromyscus_maniculatus_bairdii
ENSBTAG00000017528	SNAI3	99	47.619	ENSPCIG00000025156	SNAI2	99	47.279	Phascolarctos_cinereus
ENSBTAG00000017528	SNAI3	99	46.575	ENSPPYG00000018578	SNAI2	99	44.554	Pongo_abelii
ENSBTAG00000017528	SNAI3	99	72.945	ENSPPYG00000007643	SNAI3	99	72.945	Pongo_abelii
ENSBTAG00000017528	SNAI3	99	45.033	ENSPCOG00000015656	SNAI2	99	45.455	Propithecus_coquereli
ENSBTAG00000017528	SNAI3	99	46.309	ENSPVAG00000009457	SNAI2	99	45.695	Pteropus_vampyrus
ENSBTAG00000017528	SNAI3	99	66.782	ENSRNOG00000013586	Snai3	99	66.782	Rattus_norvegicus
ENSBTAG00000017528	SNAI3	99	46.575	ENSRBIG00000041133	SNAI2	99	44.554	Rhinopithecus_bieti
ENSBTAG00000017528	SNAI3	99	73.288	ENSRBIG00000025770	SNAI3	99	73.288	Rhinopithecus_bieti
ENSBTAG00000017528	SNAI3	99	72.945	ENSRROG00000032757	SNAI3	99	72.945	Rhinopithecus_roxellana
ENSBTAG00000017528	SNAI3	99	46.575	ENSRROG00000032273	SNAI2	99	44.554	Rhinopithecus_roxellana
ENSBTAG00000017528	SNAI3	99	46.575	ENSSBOG00000035774	SNAI2	99	44.554	Saimiri_boliviensis_boliviensis
ENSBTAG00000017528	SNAI3	99	47.619	ENSSHAG00000004205	SNAI2	99	47.279	Sarcophilus_harrisii
ENSBTAG00000017528	SNAI3	99	43.831	ENSSFOG00015016115	snai3	93	45.928	Scleropages_formosus
ENSBTAG00000017528	SNAI3	99	46.599	ENSSFOG00015018025	SNAI2	99	45.791	Scleropages_formosus
ENSBTAG00000017528	SNAI3	99	47.508	ENSSPUG00000005427	-	99	44.771	Sphenodon_punctatus
ENSBTAG00000017528	SNAI3	99	47.959	ENSSSCG00000039568	SNAI2	99	44.771	Sus_scrofa
ENSBTAG00000017528	SNAI3	100	84.880	ENSTTRG00000006262	SNAI3	100	84.880	Tursiops_truncatus
ENSBTAG00000017528	SNAI3	99	73.288	ENSUAMG00000020030	SNAI3	99	73.288	Ursus_americanus
ENSBTAG00000017528	SNAI3	99	45.033	ENSVVUG00000017625	SNAI2	99	44.371	Vulpes_vulpes
ENSBTAG00000017528	SNAI3	99	72.603	ENSVVUG00000003233	SNAI3	99	72.603	Vulpes_vulpes
ENSBTAG00000017528	SNAI3	99	47.619	ENSXETG00000024006	snai2	99	46.758	Xenopus_tropicalis