EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000017551 (Gene tree)
Gene ID: 540168
Gene Symbol: DROSHA
Alias: -
Full Name: drosha ribonuclease III
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 122690 bases
Position: chr20:41999320-42122009
Accession: 28211
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000070653	Ribonuclease_3	PF00636.26	1.5e-42	1	2
ENSBTAP00000070653	Ribonuclease_3	PF00636.26	1.5e-42	2	2
ENSBTAP00000057912	Ribonuclease_3	PF00636.26	1.5e-42	1	2
ENSBTAP00000057912	Ribonuclease_3	PF00636.26	1.5e-42	2	2
ENSBTAP00000023346	Ribonuclease_3	PF00636.26	1.6e-42	1	2
ENSBTAP00000023346	Ribonuclease_3	PF00636.26	1.6e-42	2	2
ENSBTAP00000059716	Ribonuclease_3	PF00636.26	1.6e-42	1	2
ENSBTAP00000059716	Ribonuclease_3	PF00636.26	1.6e-42	2	2
ENSBTAP00000060427	Ribonuclease_3	PF00636.26	1.6e-42	1	2
ENSBTAP00000060427	Ribonuclease_3	PF00636.26	1.6e-42	2	2
ENSBTAP00000057912	dsrm	PF00035.26	1.5e-14	1	1
ENSBTAP00000070653	dsrm	PF00035.26	1.5e-14	1	1
ENSBTAP00000023346	dsrm	PF00035.26	1.5e-14	1	1
ENSBTAP00000060427	dsrm	PF00035.26	1.5e-14	1	1
ENSBTAP00000059716	dsrm	PF00035.26	1.5e-14	1	1
ENSBTAP00000057912	Ribonucleas_3_3	PF14622.6	4.4e-44	1	2
ENSBTAP00000057912	Ribonucleas_3_3	PF14622.6	4.4e-44	2	2
ENSBTAP00000023346	Ribonucleas_3_3	PF14622.6	4.4e-44	1	2
ENSBTAP00000023346	Ribonucleas_3_3	PF14622.6	4.4e-44	2	2
ENSBTAP00000059716	Ribonucleas_3_3	PF14622.6	4.6e-44	1	2
ENSBTAP00000059716	Ribonucleas_3_3	PF14622.6	4.6e-44	2	2
ENSBTAP00000060427	Ribonucleas_3_3	PF14622.6	4.7e-44	1	2
ENSBTAP00000060427	Ribonucleas_3_3	PF14622.6	4.7e-44	2	2
ENSBTAP00000070653	Ribonucleas_3_3	PF14622.6	5.1e-44	1	2
ENSBTAP00000070653	Ribonucleas_3_3	PF14622.6	5.1e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000074536	-	4042	-	ENSBTAP00000070653	1299 (aa)	-	-
ENSBTAT00000067638	-	4369	XM_005221630	ENSBTAP00000060427	1338 (aa)	XP_005221687	UPI000383B213
ENSBTAT00000023346	-	4083	-	ENSBTAP00000023346	1315 (aa)	-	E1BGY0
ENSBTAT00000082025	-	4303	XM_002696390	ENSBTAP00000059716	1330 (aa)	XP_002696436	UPI00017C3A2D
ENSBTAT00000075813	-	4288	-	ENSBTAP00000057912	1311 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000017551's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG
bta05205	Proteoglycans in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000017551's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000017551	DROSHA	100	97.820	ENSG00000113360	DROSHA	99	97.820	Homo_sapiens
ENSBTAG00000017551	DROSHA	100	94.664	ENSAMEG00000006000	DROSHA	100	94.549	Ailuropoda_melanoleuca
ENSBTAG00000017551	DROSHA	73	91.062	ENSACIG00000019308	drosha	98	88.822	Amphilophus_citrinellus
ENSBTAG00000017551	DROSHA	87	83.944	ENSATEG00000021939	drosha	87	83.133	Anabas_testudineus
ENSBTAG00000017551	DROSHA	100	84.767	ENSAPLG00000004372	DROSHA	100	84.985	Anas_platyrhynchos
ENSBTAG00000017551	DROSHA	98	81.718	ENSACAG00000007970	DROSHA	99	81.634	Anolis_carolinensis
ENSBTAG00000017551	DROSHA	100	94.993	ENSANAG00000020506	DROSHA	100	95.399	Aotus_nancymaae
ENSBTAG00000017551	DROSHA	97	75.696	ENSACLG00000012227	drosha	88	80.249	Astatotilapia_calliptera
ENSBTAG00000017551	DROSHA	100	77.412	ENSAMXG00000005582	drosha	88	81.772	Astyanax_mexicanus
ENSBTAG00000017551	DROSHA	64	36.374	WBGene00009163	drsh-1	76	36.504	Caenorhabditis_elegans
ENSBTAG00000017551	DROSHA	100	97.669	ENSCJAG00000018881	DROSHA	98	97.608	Callithrix_jacchus
ENSBTAG00000017551	DROSHA	100	98.045	ENSCAFG00020017559	DROSHA	100	97.998	Canis_lupus_dingo
ENSBTAG00000017551	DROSHA	100	99.549	ENSCHIG00000022226	DROSHA	100	99.477	Capra_hircus
ENSBTAG00000017551	DROSHA	100	87.591	ENSCPOG00000015051	DROSHA	90	91.624	Cavia_porcellus
ENSBTAG00000017551	DROSHA	100	97.519	ENSCCAG00000027283	DROSHA	100	98.671	Cebus_capucinus
ENSBTAG00000017551	DROSHA	100	97.594	ENSCATG00000016833	DROSHA	100	97.444	Cercocebus_atys
ENSBTAG00000017551	DROSHA	100	97.449	ENSCLAG00000013048	DROSHA	100	97.449	Chinchilla_lanigera
ENSBTAG00000017551	DROSHA	100	97.669	ENSCSAG00000017202	DROSHA	97	97.534	Chlorocebus_sabaeus
ENSBTAG00000017551	DROSHA	69	100.000	ENSCHOG00000011786	DROSHA	78	90.221	Choloepus_hoffmanni
ENSBTAG00000017551	DROSHA	98	88.847	ENSCPBG00000000467	DROSHA	100	88.424	Chrysemys_picta_bellii
ENSBTAG00000017551	DROSHA	64	58.971	ENSCSAVG00000010638	-	99	58.971	Ciona_savignyi
ENSBTAG00000017551	DROSHA	100	97.594	ENSCANG00000035071	DROSHA	100	97.444	Colobus_angolensis_palliatus
ENSBTAG00000017551	DROSHA	100	93.091	ENSCGRG00001008885	Drosha	100	93.236	Cricetulus_griseus_chok1gshd
ENSBTAG00000017551	DROSHA	100	93.091	ENSCGRG00000006944	Drosha	100	93.236	Cricetulus_griseus_crigri
ENSBTAG00000017551	DROSHA	86	81.180	ENSCSEG00000001452	drosha	88	80.084	Cynoglossus_semilaevis
ENSBTAG00000017551	DROSHA	83	83.141	ENSCVAG00000004619	drosha	88	81.650	Cyprinodon_variegatus
ENSBTAG00000017551	DROSHA	83	84.234	ENSDARG00000055563	drosha	89	82.812	Danio_rerio
ENSBTAG00000017551	DROSHA	99	89.763	ENSDNOG00000001537	DROSHA	99	89.693	Dasypus_novemcinctus
ENSBTAG00000017551	DROSHA	100	92.072	ENSDORG00000005624	Drosha	100	91.854	Dipodomys_ordii
ENSBTAG00000017551	DROSHA	88	48.883	FBgn0026722	drosha	85	49.444	Drosophila_melanogaster
ENSBTAG00000017551	DROSHA	90	96.629	ENSETEG00000007814	DROSHA	89	96.629	Echinops_telfairi
ENSBTAG00000017551	DROSHA	52	82.327	ENSEBUG00000005974	-	99	82.327	Eptatretus_burgeri
ENSBTAG00000017551	DROSHA	100	98.120	ENSEASG00005007149	DROSHA	99	98.120	Equus_asinus_asinus
ENSBTAG00000017551	DROSHA	100	98.120	ENSECAG00000013578	DROSHA	97	98.120	Equus_caballus
ENSBTAG00000017551	DROSHA	79	93.536	ENSEEUG00000006351	DROSHA	78	90.037	Erinaceus_europaeus
ENSBTAG00000017551	DROSHA	95	72.136	ENSELUG00000015039	drosha	95	70.712	Esox_lucius
ENSBTAG00000017551	DROSHA	100	98.195	ENSFCAG00000000360	DROSHA	99	98.195	Felis_catus
ENSBTAG00000017551	DROSHA	99	85.259	ENSFALG00000012843	DROSHA	100	84.802	Ficedula_albicollis
ENSBTAG00000017551	DROSHA	100	97.299	ENSFDAG00000018414	DROSHA	99	97.299	Fukomys_damarensis
ENSBTAG00000017551	DROSHA	87	64.370	ENSFHEG00000003840	drosha	82	68.672	Fundulus_heteroclitus
ENSBTAG00000017551	DROSHA	100	87.369	ENSGALG00000012916	DROSHA	100	87.145	Gallus_gallus
ENSBTAG00000017551	DROSHA	83	84.103	ENSGAFG00000016853	drosha	88	82.218	Gambusia_affinis
ENSBTAG00000017551	DROSHA	98	88.695	ENSGAGG00000005621	DROSHA	100	88.275	Gopherus_agassizii
ENSBTAG00000017551	DROSHA	100	97.820	ENSGGOG00000011006	DROSHA	100	97.546	Gorilla_gorilla
ENSBTAG00000017551	DROSHA	94	72.091	ENSHBUG00000015907	drosha	87	78.571	Haplochromis_burtoni
ENSBTAG00000017551	DROSHA	100	96.999	ENSHGLG00000018873	DROSHA	99	96.868	Heterocephalus_glaber_female
ENSBTAG00000017551	DROSHA	100	96.999	ENSHGLG00100015793	DROSHA	98	96.999	Heterocephalus_glaber_male
ENSBTAG00000017551	DROSHA	86	80.920	ENSHCOG00000008454	drosha	96	82.220	Hippocampus_comes
ENSBTAG00000017551	DROSHA	77	100.000	ENSSTOG00000016323	DROSHA	100	99.630	Ictidomys_tridecemlineatus
ENSBTAG00000017551	DROSHA	100	94.221	ENSJJAG00000019758	Drosha	100	94.036	Jaculus_jaculus
ENSBTAG00000017551	DROSHA	100	79.758	ENSLBEG00000006606	drosha	87	81.960	Labrus_bergylta
ENSBTAG00000017551	DROSHA	99	81.933	ENSLACG00000005937	DROSHA	99	81.737	Latimeria_chalumnae
ENSBTAG00000017551	DROSHA	100	77.331	ENSLOCG00000012852	drosha	99	77.292	Lepisosteus_oculatus
ENSBTAG00000017551	DROSHA	99	93.926	ENSLAFG00000013831	DROSHA	100	93.796	Loxodonta_africana
ENSBTAG00000017551	DROSHA	100	97.614	ENSMFAG00000003055	DROSHA	97	97.459	Macaca_fascicularis
ENSBTAG00000017551	DROSHA	100	97.594	ENSMMUG00000012193	DROSHA	99	99.587	Macaca_mulatta
ENSBTAG00000017551	DROSHA	100	97.460	ENSMNEG00000037529	DROSHA	97	97.309	Macaca_nemestrina
ENSBTAG00000017551	DROSHA	100	92.412	ENSMLEG00000024167	DROSHA	99	92.412	Mandrillus_leucophaeus
ENSBTAG00000017551	DROSHA	87	82.079	ENSMAMG00000012613	drosha	95	89.897	Mastacembelus_armatus
ENSBTAG00000017551	DROSHA	97	75.696	ENSMZEG00005019487	drosha	88	80.249	Maylandia_zebra
ENSBTAG00000017551	DROSHA	100	87.519	ENSMGAG00000005087	DROSHA	100	87.294	Meleagris_gallopavo
ENSBTAG00000017551	DROSHA	100	92.655	ENSMAUG00000002863	Drosha	100	93.382	Mesocricetus_auratus
ENSBTAG00000017551	DROSHA	100	95.512	ENSMICG00000002241	DROSHA	99	95.512	Microcebus_murinus
ENSBTAG00000017551	DROSHA	99	93.551	ENSMOCG00000015044	Drosha	100	93.416	Microtus_ochrogaster
ENSBTAG00000017551	DROSHA	75	86.907	ENSMMOG00000004016	drosha	98	85.230	Mola_mola
ENSBTAG00000017551	DROSHA	98	86.901	ENSMODG00000004807	DROSHA	99	86.774	Monodelphis_domestica
ENSBTAG00000017551	DROSHA	100	75.953	ENSMALG00000010542	drosha	88	81.575	Monopterus_albus
ENSBTAG00000017551	DROSHA	100	92.297	MGP_CAROLIEiJ_G0019687	Drosha	95	98.762	Mus_caroli
ENSBTAG00000017551	DROSHA	100	92.369	ENSMUSG00000022191	Drosha	100	92.442	Mus_musculus
ENSBTAG00000017551	DROSHA	100	92.369	MGP_PahariEiJ_G0016063	Drosha	95	98.968	Mus_pahari
ENSBTAG00000017551	DROSHA	100	91.933	MGP_SPRETEiJ_G0020580	Drosha	95	98.762	Mus_spretus
ENSBTAG00000017551	DROSHA	100	95.318	ENSMPUG00000015237	DROSHA	99	95.318	Mustela_putorius_furo
ENSBTAG00000017551	DROSHA	100	93.727	ENSMLUG00000002581	DROSHA	99	93.727	Myotis_lucifugus
ENSBTAG00000017551	DROSHA	94	99.522	ENSNGAG00000017329	Drosha	100	87.855	Nannospalax_galili
ENSBTAG00000017551	DROSHA	74	73.416	ENSNBRG00000001870	drosha	96	72.515	Neolamprologus_brichardi
ENSBTAG00000017551	DROSHA	100	87.719	ENSNLEG00000013963	DROSHA	100	97.342	Nomascus_leucogenys
ENSBTAG00000017551	DROSHA	81	79.023	ENSMEUG00000002029	DROSHA	81	79.023	Notamacropus_eugenii
ENSBTAG00000017551	DROSHA	88	96.552	ENSOPRG00000010845	DROSHA	85	96.552	Ochotona_princeps
ENSBTAG00000017551	DROSHA	100	94.526	ENSODEG00000001911	DROSHA	100	94.412	Octodon_degus
ENSBTAG00000017551	DROSHA	98	74.161	ENSONIG00000006578	drosha	88	79.934	Oreochromis_niloticus
ENSBTAG00000017551	DROSHA	59	80.745	ENSOANG00000015744	-	100	80.745	Ornithorhynchus_anatinus
ENSBTAG00000017551	DROSHA	100	95.967	ENSOCUG00000000367	DROSHA	98	96.042	Oryctolagus_cuniculus
ENSBTAG00000017551	DROSHA	98	75.406	ENSORLG00000013592	drosha	89	80.068	Oryzias_latipes
ENSBTAG00000017551	DROSHA	75	88.139	ENSORLG00020002854	drosha	95	90.471	Oryzias_latipes_hni
ENSBTAG00000017551	DROSHA	75	89.162	ENSORLG00015003156	drosha	95	90.103	Oryzias_latipes_hsok
ENSBTAG00000017551	DROSHA	87	80.239	ENSOMEG00000001062	drosha	89	80.321	Oryzias_melastigma
ENSBTAG00000017551	DROSHA	90	91.964	ENSOGAG00000005424	DROSHA	99	93.328	Otolemur_garnettii
ENSBTAG00000017551	DROSHA	100	95.789	ENSPPAG00000037526	DROSHA	99	98.077	Pan_paniscus
ENSBTAG00000017551	DROSHA	100	98.195	ENSPPRG00000002687	DROSHA	99	98.195	Panthera_pardus
ENSBTAG00000017551	DROSHA	100	98.195	ENSPTIG00000017523	DROSHA	99	98.195	Panthera_tigris_altaica
ENSBTAG00000017551	DROSHA	100	97.844	ENSPTRG00000016762	DROSHA	99	97.844	Pan_troglodytes
ENSBTAG00000017551	DROSHA	100	97.691	ENSPANG00000003027	DROSHA	97	97.534	Papio_anubis
ENSBTAG00000017551	DROSHA	85	84.716	ENSPKIG00000011514	drosha	100	78.322	Paramormyrops_kingsleyae
ENSBTAG00000017551	DROSHA	100	92.587	ENSPEMG00000000607	Drosha	100	92.733	Peromyscus_maniculatus_bairdii
ENSBTAG00000017551	DROSHA	98	88.423	ENSPCIG00000006010	DROSHA	99	87.955	Phascolarctos_cinereus
ENSBTAG00000017551	DROSHA	83	85.064	ENSPREG00000022302	drosha	89	83.449	Poecilia_reticulata
ENSBTAG00000017551	DROSHA	100	94.952	ENSPPYG00000015370	DROSHA	99	94.952	Pongo_abelii
ENSBTAG00000017551	DROSHA	96	91.880	ENSPCAG00000007190	DROSHA	94	91.880	Procavia_capensis
ENSBTAG00000017551	DROSHA	100	95.038	ENSPCOG00000028511	DROSHA	100	95.258	Propithecus_coquereli
ENSBTAG00000017551	DROSHA	100	90.764	ENSPVAG00000013167	DROSHA	100	91.127	Pteropus_vampyrus
ENSBTAG00000017551	DROSHA	97	75.546	ENSPNYG00000000398	drosha	99	87.763	Pundamilia_nyererei
ENSBTAG00000017551	DROSHA	74	92.236	ENSPNAG00000011876	drosha	86	88.235	Pygocentrus_nattereri
ENSBTAG00000017551	DROSHA	100	92.587	ENSRNOG00000013451	Drosha	100	92.660	Rattus_norvegicus
ENSBTAG00000017551	DROSHA	100	96.243	ENSRBIG00000032786	DROSHA	99	96.243	Rhinopithecus_bieti
ENSBTAG00000017551	DROSHA	100	97.691	ENSRROG00000028199	DROSHA	98	97.669	Rhinopithecus_roxellana
ENSBTAG00000017551	DROSHA	100	97.383	ENSSBOG00000024008	DROSHA	100	97.035	Saimiri_boliviensis_boliviensis
ENSBTAG00000017551	DROSHA	98	86.826	ENSSHAG00000015198	DROSHA	99	96.315	Sarcophilus_harrisii
ENSBTAG00000017551	DROSHA	86	83.463	ENSSFOG00015009776	drosha	90	83.845	Scleropages_formosus
ENSBTAG00000017551	DROSHA	89	79.106	ENSSMAG00000008069	drosha	100	73.815	Scophthalmus_maximus
ENSBTAG00000017551	DROSHA	87	81.688	ENSSDUG00000010944	drosha	95	91.443	Seriola_dumerili
ENSBTAG00000017551	DROSHA	87	81.826	ENSSLDG00000025271	drosha	95	91.340	Seriola_lalandi_dorsalis
ENSBTAG00000017551	DROSHA	72	85.294	ENSSARG00000004436	-	68	89.706	Sorex_araneus
ENSBTAG00000017551	DROSHA	98	83.082	ENSSPUG00000006902	DROSHA	100	82.900	Sphenodon_punctatus
ENSBTAG00000017551	DROSHA	100	98.421	ENSSSCG00000016809	DROSHA	100	98.368	Sus_scrofa
ENSBTAG00000017551	DROSHA	99	84.497	ENSTGUG00000001955	DROSHA	100	84.050	Taeniopygia_guttata
ENSBTAG00000017551	DROSHA	93	74.199	ENSTRUG00000017778	drosha	85	80.204	Takifugu_rubripes
ENSBTAG00000017551	DROSHA	87	79.848	ENSTNIG00000008688	drosha	95	90.554	Tetraodon_nigroviridis
ENSBTAG00000017551	DROSHA	94	92.857	ENSTBEG00000000537	DROSHA	100	84.760	Tupaia_belangeri
ENSBTAG00000017551	DROSHA	100	94.587	ENSTTRG00000004210	DROSHA	100	94.545	Tursiops_truncatus
ENSBTAG00000017551	DROSHA	100	98.120	ENSUAMG00000025257	DROSHA	99	98.120	Ursus_americanus
ENSBTAG00000017551	DROSHA	100	93.910	ENSUMAG00000014097	DROSHA	100	98.472	Ursus_maritimus
ENSBTAG00000017551	DROSHA	79	93.242	ENSVPAG00000011260	DROSHA	100	90.145	Vicugna_pacos
ENSBTAG00000017551	DROSHA	100	98.271	ENSVVUG00000022212	DROSHA	99	99.417	Vulpes_vulpes
ENSBTAG00000017551	DROSHA	85	87.413	ENSXETG00000016701	drosha	99	76.372	Xenopus_tropicalis