EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000017776 (Gene tree)
Gene ID: -
Gene Symbol: CHD2
Alias: -
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 36331 bases
Position: chr21:14083602-14119932
Accession: 27278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000054394	ResIII	PF04851.15	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000065179	-	2505	-	ENSBTAP00000054394	834 (aa)	-	G3MXX3

Gene Model

Click here to download ENSBTAG00000017776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000017776's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000017776	CHD2	65	44.607	ENSBTAG00000002292	SMARCA1	51	43.649
ENSBTAG00000017776	CHD2	63	47.009	ENSBTAG00000005979	HELLS	83	42.491
ENSBTAG00000017776	CHD2	56	36.762	ENSBTAG00000017061	SMARCAD1	50	36.762
ENSBTAG00000017776	CHD2	70	41.681	ENSBTAG00000003399	SMARCA5	50	43.085
ENSBTAG00000017776	CHD2	55	32.929	ENSBTAG00000019901	RAD54L	66	33.400
ENSBTAG00000017776	CHD2	63	45.763	ENSBTAG00000020831	CHD1L	56	45.731
ENSBTAG00000017776	CHD2	56	33.462	ENSBTAG00000000632	RAD54B	55	33.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000017776	CHD2	99	96.930	ENSG00000173575	CHD2	99	99.167	Homo_sapiens
ENSBTAG00000017776	CHD2	99	97.285	ENSAMEG00000010805	-	74	97.285	Ailuropoda_melanoleuca
ENSBTAG00000017776	CHD2	99	98.678	ENSCAFG00000010998	CHD2	61	97.048	Canis_familiaris
ENSBTAG00000017776	CHD2	99	96.340	ENSCPOG00000005800	-	50	96.340	Cavia_porcellus
ENSBTAG00000017776	CHD2	98	94.046	ENSCPBG00000018049	-	93	94.168	Chrysemys_picta_bellii
ENSBTAG00000017776	CHD2	99	64.380	ENSCSAVG00000007580	-	69	67.199	Ciona_savignyi
ENSBTAG00000017776	CHD2	78	80.130	ENSEBUG00000014994	chd2	54	80.130	Eptatretus_burgeri
ENSBTAG00000017776	CHD2	99	99.159	ENSEASG00005015526	-	63	99.158	Equus_asinus_asinus
ENSBTAG00000017776	CHD2	98	94.161	ENSGAGG00000013176	-	98	94.282	Gopherus_agassizii
ENSBTAG00000017776	CHD2	91	81.725	ENSKMAG00000015849	chd2	52	81.725	Kryptolebias_marmoratus
ENSBTAG00000017776	CHD2	99	98.559	ENSLAFG00000016885	-	96	98.559	Loxodonta_africana
ENSBTAG00000017776	CHD2	97	90.698	ENSOANG00000004385	-	52	94.330	Ornithorhynchus_anatinus
ENSBTAG00000017776	CHD2	99	96.886	ENSOCUG00000001628	-	77	96.612	Oryctolagus_cuniculus
ENSBTAG00000017776	CHD2	99	81.420	ENSORLG00000008403	chd2	68	78.066	Oryzias_latipes
ENSBTAG00000017776	CHD2	50	78.009	ENSORLG00015017721	chd2	68	77.594	Oryzias_latipes_hsok
ENSBTAG00000017776	CHD2	93	78.954	ENSPMGG00000009941	chd2	53	78.954	Periophthalmus_magnuspinnatus
ENSBTAG00000017776	CHD2	63	81.784	ENSPMAG00000003871	-	100	82.543	Petromyzon_marinus
ENSBTAG00000017776	CHD2	99	96.038	ENSPCIG00000009417	-	59	95.134	Phascolarctos_cinereus
ENSBTAG00000017776	CHD2	80	75.489	ENSPFOG00000000291	-	71	75.688	Poecilia_formosa
ENSBTAG00000017776	CHD2	99	97.403	ENSSSCG00000002266	-	53	97.359	Sus_scrofa
ENSBTAG00000017776	CHD2	99	81.227	ENSTNIG00000010760	chd2	63	80.680	Tetraodon_nigroviridis
ENSBTAG00000017776	CHD2	99	78.960	ENSTBEG00000017730	-	54	78.960	Tupaia_belangeri
ENSBTAG00000017776	CHD2	98	86.585	ENSXETG00000024129	chd2	51	86.585	Xenopus_tropicalis