EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000017919 (Gene tree)
Gene ID: 540891
Gene Symbol: CNOT4
Alias: -
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 152171 bases
Position: chr4:99183547-99335717
Accession: 27519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000071250	RRM_1	PF00076.22	1.1e-05	1	1
ENSBTAP00000065174	RRM_1	PF00076.22	1.1e-05	1	1
ENSBTAP00000023825	RRM_1	PF00076.22	1.3e-05	1	1
ENSBTAP00000065146	RRM_1	PF00076.22	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000023825	-	3002	-	ENSBTAP00000023825	642 (aa)	-	F1MWA7
ENSBTAT00000071100	-	3215	-	ENSBTAP00000065146	713 (aa)	XP_005205826	UPI000383BBCA
ENSBTAT00000082842	-	2070	-	ENSBTAP00000065174	575 (aa)	XP_010802825	UPI000572C715
ENSBTAT00000086248	-	2652	XM_010804522	ENSBTAP00000071250	576 (aa)	XP_010802824	UPI000572B3B6

Gene Model

Click here to download ENSBTAG00000017919's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000017919's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000017919	CNOT4	100	99.221	ENSG00000080802	CNOT4	100	99.221	Homo_sapiens
ENSBTAG00000017919	CNOT4	94	89.299	ENSAPOG00000016272	cnot4a	83	89.299	Acanthochromis_polyacanthus
ENSBTAG00000017919	CNOT4	97	98.406	ENSAMEG00000012081	CNOT4	92	98.174	Ailuropoda_melanoleuca
ENSBTAG00000017919	CNOT4	100	64.545	ENSACIG00000003011	cnot4a	100	61.338	Amphilophus_citrinellus
ENSBTAG00000017919	CNOT4	99	89.299	ENSAOCG00000010792	cnot4a	92	89.299	Amphiprion_ocellaris
ENSBTAG00000017919	CNOT4	99	89.299	ENSAPEG00000004680	cnot4a	92	89.299	Amphiprion_percula
ENSBTAG00000017919	CNOT4	99	88.930	ENSATEG00000017580	cnot4a	92	88.930	Anabas_testudineus
ENSBTAG00000017919	CNOT4	100	88.189	ENSAPLG00000016441	CNOT4	100	88.189	Anas_platyrhynchos
ENSBTAG00000017919	CNOT4	100	88.058	ENSACAG00000011154	CNOT4	100	88.058	Anolis_carolinensis
ENSBTAG00000017919	CNOT4	100	98.609	ENSANAG00000032156	CNOT4	100	98.609	Aotus_nancymaae
ENSBTAG00000017919	CNOT4	100	88.321	ENSACLG00000002514	cnot4a	92	88.321	Astatotilapia_calliptera
ENSBTAG00000017919	CNOT4	100	72.451	ENSAMXG00000001373	cnot4a	100	71.537	Astyanax_mexicanus
ENSBTAG00000017919	CNOT4	93	93.962	ENSAMXG00000011473	cnot4b	100	71.746	Astyanax_mexicanus
ENSBTAG00000017919	CNOT4	100	98.609	ENSCJAG00000012532	CNOT4	100	98.609	Callithrix_jacchus
ENSBTAG00000017919	CNOT4	100	99.377	ENSCAFG00000003223	CNOT4	100	99.377	Canis_familiaris
ENSBTAG00000017919	CNOT4	100	98.957	ENSCAFG00020000093	CNOT4	100	98.957	Canis_lupus_dingo
ENSBTAG00000017919	CNOT4	100	99.579	ENSCHIG00000010955	CNOT4	100	99.579	Capra_hircus
ENSBTAG00000017919	CNOT4	100	99.065	ENSTSYG00000000893	CNOT4	100	99.065	Carlito_syrichta
ENSBTAG00000017919	CNOT4	99	97.059	ENSCAPG00000006213	CNOT4	100	95.639	Cavia_aperea
ENSBTAG00000017919	CNOT4	100	98.287	ENSCPOG00000011526	CNOT4	100	98.287	Cavia_porcellus
ENSBTAG00000017919	CNOT4	100	99.304	ENSCCAG00000024414	CNOT4	100	99.304	Cebus_capucinus
ENSBTAG00000017919	CNOT4	100	99.304	ENSCATG00000022607	CNOT4	100	99.304	Cercocebus_atys
ENSBTAG00000017919	CNOT4	100	98.131	ENSCLAG00000001857	CNOT4	100	98.131	Chinchilla_lanigera
ENSBTAG00000017919	CNOT4	100	98.317	ENSCSAG00000009096	CNOT4	100	98.317	Chlorocebus_sabaeus
ENSBTAG00000017919	CNOT4	68	99.465	ENSCHOG00000010412	CNOT4	63	99.465	Choloepus_hoffmanni
ENSBTAG00000017919	CNOT4	100	95.512	ENSCPBG00000004959	CNOT4	100	95.512	Chrysemys_picta_bellii
ENSBTAG00000017919	CNOT4	66	69.323	ENSCING00000004364	-	93	42.365	Ciona_intestinalis
ENSBTAG00000017919	CNOT4	100	99.065	ENSCANG00000029319	CNOT4	100	99.065	Colobus_angolensis_palliatus
ENSBTAG00000017919	CNOT4	100	99.130	ENSCGRG00001014651	Cnot4	100	99.130	Cricetulus_griseus_chok1gshd
ENSBTAG00000017919	CNOT4	100	98.910	ENSCGRG00000005727	Cnot4	100	98.910	Cricetulus_griseus_crigri
ENSBTAG00000017919	CNOT4	95	89.299	ENSCSEG00000015080	cnot4a	91	75.658	Cynoglossus_semilaevis
ENSBTAG00000017919	CNOT4	94	88.321	ENSCVAG00000009399	cnot4a	100	73.435	Cyprinodon_variegatus
ENSBTAG00000017919	CNOT4	100	68.519	ENSDARG00000007639	cnot4b	100	66.091	Danio_rerio
ENSBTAG00000017919	CNOT4	100	69.816	ENSDARG00000007045	cnot4a	100	69.330	Danio_rerio
ENSBTAG00000017919	CNOT4	100	98.177	ENSDNOG00000009409	CNOT4	100	98.177	Dasypus_novemcinctus
ENSBTAG00000017919	CNOT4	100	99.130	ENSDORG00000012268	Cnot4	100	99.130	Dipodomys_ordii
ENSBTAG00000017919	CNOT4	100	92.426	ENSETEG00000013407	CNOT4	89	94.940	Echinops_telfairi
ENSBTAG00000017919	CNOT4	100	98.957	ENSEASG00005014430	CNOT4	100	98.957	Equus_asinus_asinus
ENSBTAG00000017919	CNOT4	100	98.957	ENSECAG00000020262	CNOT4	100	98.957	Equus_caballus
ENSBTAG00000017919	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSBTAG00000017919	CNOT4	100	73.021	ENSELUG00000011540	cnot4b	97	71.229	Esox_lucius
ENSBTAG00000017919	CNOT4	100	98.957	ENSFCAG00000011904	CNOT4	100	98.957	Felis_catus
ENSBTAG00000017919	CNOT4	100	88.583	ENSFALG00000011194	CNOT4	100	88.583	Ficedula_albicollis
ENSBTAG00000017919	CNOT4	100	99.130	ENSFDAG00000013525	CNOT4	100	99.130	Fukomys_damarensis
ENSBTAG00000017919	CNOT4	94	88.321	ENSFHEG00000006608	cnot4a	100	72.838	Fundulus_heteroclitus
ENSBTAG00000017919	CNOT4	96	59.269	ENSGMOG00000001329	cnot4a	97	62.082	Gadus_morhua
ENSBTAG00000017919	CNOT4	100	94.811	ENSGALG00000011682	CNOT4	100	94.811	Gallus_gallus
ENSBTAG00000017919	CNOT4	100	72.743	ENSGACG00000004276	cnot4a	100	71.084	Gasterosteus_aculeatus
ENSBTAG00000017919	CNOT4	100	94.951	ENSGAGG00000017331	CNOT4	100	94.951	Gopherus_agassizii
ENSBTAG00000017919	CNOT4	96	94.798	ENSGGOG00000000142	CNOT4	99	98.129	Gorilla_gorilla
ENSBTAG00000017919	CNOT4	100	88.321	ENSHBUG00000000027	cnot4a	92	88.321	Haplochromis_burtoni
ENSBTAG00000017919	CNOT4	100	99.130	ENSHGLG00000011533	CNOT4	100	99.130	Heterocephalus_glaber_female
ENSBTAG00000017919	CNOT4	100	99.130	ENSHGLG00100013058	CNOT4	100	99.130	Heterocephalus_glaber_male
ENSBTAG00000017919	CNOT4	99	87.226	ENSHCOG00000015815	cnot4a	100	71.390	Hippocampus_comes
ENSBTAG00000017919	CNOT4	100	71.091	ENSIPUG00000016994	cnot4b	100	70.501	Ictalurus_punctatus
ENSBTAG00000017919	CNOT4	100	71.818	ENSIPUG00000006393	cnot4	100	71.364	Ictalurus_punctatus
ENSBTAG00000017919	CNOT4	100	98.783	ENSSTOG00000007717	CNOT4	100	98.783	Ictidomys_tridecemlineatus
ENSBTAG00000017919	CNOT4	100	98.435	ENSJJAG00000016618	Cnot4	100	98.435	Jaculus_jaculus
ENSBTAG00000017919	CNOT4	100	81.043	ENSJJAG00000019991	-	100	81.043	Jaculus_jaculus
ENSBTAG00000017919	CNOT4	100	73.100	ENSKMAG00000004581	cnot4a	100	72.948	Kryptolebias_marmoratus
ENSBTAG00000017919	CNOT4	100	66.173	ENSLBEG00000009999	cnot4a	100	66.173	Labrus_bergylta
ENSBTAG00000017919	CNOT4	100	83.838	ENSLACG00000002647	CNOT4	99	83.838	Latimeria_chalumnae
ENSBTAG00000017919	CNOT4	100	77.620	ENSLOCG00000016126	cnot4a	100	76.973	Lepisosteus_oculatus
ENSBTAG00000017919	CNOT4	100	97.195	ENSLAFG00000000709	CNOT4	100	97.195	Loxodonta_africana
ENSBTAG00000017919	CNOT4	100	99.221	ENSMFAG00000046349	CNOT4	100	99.221	Macaca_fascicularis
ENSBTAG00000017919	CNOT4	100	99.304	ENSMMUG00000016181	CNOT4	100	99.304	Macaca_mulatta
ENSBTAG00000017919	CNOT4	100	98.878	ENSMNEG00000042164	CNOT4	100	98.878	Macaca_nemestrina
ENSBTAG00000017919	CNOT4	100	99.221	ENSMLEG00000032709	CNOT4	100	99.221	Mandrillus_leucophaeus
ENSBTAG00000017919	CNOT4	99	89.299	ENSMAMG00000023194	cnot4a	92	89.299	Mastacembelus_armatus
ENSBTAG00000017919	CNOT4	100	88.321	ENSMZEG00005007312	cnot4a	92	88.321	Maylandia_zebra
ENSBTAG00000017919	CNOT4	100	88.058	ENSMGAG00000011788	CNOT4	100	88.058	Meleagris_gallopavo
ENSBTAG00000017919	CNOT4	100	99.130	ENSMAUG00000020415	Cnot4	100	99.130	Mesocricetus_auratus
ENSBTAG00000017919	CNOT4	100	99.652	ENSMICG00000001667	CNOT4	100	99.652	Microcebus_murinus
ENSBTAG00000017919	CNOT4	100	98.957	ENSMOCG00000020955	Cnot4	100	98.957	Microtus_ochrogaster
ENSBTAG00000017919	CNOT4	94	75.592	ENSMMOG00000014565	cnot4a	97	74.875	Mola_mola
ENSBTAG00000017919	CNOT4	100	95.933	ENSMODG00000014068	CNOT4	100	95.933	Monodelphis_domestica
ENSBTAG00000017919	CNOT4	94	89.299	ENSMALG00000011662	cnot4a	89	60.847	Monopterus_albus
ENSBTAG00000017919	CNOT4	100	98.787	MGP_CAROLIEiJ_G0028217	Cnot4	100	98.787	Mus_caroli
ENSBTAG00000017919	CNOT4	100	98.957	ENSMUSG00000038784	Cnot4	100	98.957	Mus_musculus
ENSBTAG00000017919	CNOT4	100	98.957	MGP_PahariEiJ_G0021974	Cnot4	100	98.957	Mus_pahari
ENSBTAG00000017919	CNOT4	100	98.609	MGP_SPRETEiJ_G0029216	Cnot4	100	98.609	Mus_spretus
ENSBTAG00000017919	CNOT4	100	98.317	ENSMPUG00000004089	CNOT4	100	98.317	Mustela_putorius_furo
ENSBTAG00000017919	CNOT4	100	99.065	ENSMLUG00000008260	CNOT4	100	99.065	Myotis_lucifugus
ENSBTAG00000017919	CNOT4	100	98.957	ENSNGAG00000015030	Cnot4	100	98.957	Nannospalax_galili
ENSBTAG00000017919	CNOT4	100	71.278	ENSNBRG00000021144	cnot4a	100	71.128	Neolamprologus_brichardi
ENSBTAG00000017919	CNOT4	100	98.910	ENSNLEG00000013352	CNOT4	100	98.910	Nomascus_leucogenys
ENSBTAG00000017919	CNOT4	97	79.710	ENSOPRG00000001023	CNOT4	90	79.710	Ochotona_princeps
ENSBTAG00000017919	CNOT4	100	98.435	ENSODEG00000012975	CNOT4	100	98.435	Octodon_degus
ENSBTAG00000017919	CNOT4	100	88.321	ENSONIG00000008656	cnot4a	92	88.321	Oreochromis_niloticus
ENSBTAG00000017919	CNOT4	100	94.685	ENSOANG00000005006	CNOT4	100	94.685	Ornithorhynchus_anatinus
ENSBTAG00000017919	CNOT4	100	98.177	ENSOCUG00000013448	CNOT4	100	98.177	Oryctolagus_cuniculus
ENSBTAG00000017919	CNOT4	100	73.282	ENSORLG00000003727	cnot4a	100	72.824	Oryzias_latipes
ENSBTAG00000017919	CNOT4	100	73.002	ENSORLG00020015684	cnot4a	100	72.398	Oryzias_latipes_hni
ENSBTAG00000017919	CNOT4	100	73.435	ENSORLG00015008470	cnot4a	100	72.824	Oryzias_latipes_hsok
ENSBTAG00000017919	CNOT4	100	72.366	ENSOMEG00000011084	cnot4a	100	72.061	Oryzias_melastigma
ENSBTAG00000017919	CNOT4	100	99.018	ENSOGAG00000015499	CNOT4	100	99.018	Otolemur_garnettii
ENSBTAG00000017919	CNOT4	100	99.439	ENSOARG00000008803	CNOT4	100	99.439	Ovis_aries
ENSBTAG00000017919	CNOT4	100	98.957	ENSPPAG00000041937	CNOT4	100	98.957	Pan_paniscus
ENSBTAG00000017919	CNOT4	100	99.652	ENSPPRG00000023940	CNOT4	100	99.652	Panthera_pardus
ENSBTAG00000017919	CNOT4	100	98.957	ENSPTIG00000016601	CNOT4	100	98.957	Panthera_tigris_altaica
ENSBTAG00000017919	CNOT4	100	99.065	ENSPTRG00000019727	CNOT4	100	99.065	Pan_troglodytes
ENSBTAG00000017919	CNOT4	100	99.130	ENSPANG00000017724	CNOT4	100	99.130	Papio_anubis
ENSBTAG00000017919	CNOT4	100	72.179	ENSPKIG00000018137	cnot4a	100	71.870	Paramormyrops_kingsleyae
ENSBTAG00000017919	CNOT4	100	87.418	ENSPSIG00000011256	CNOT4	100	87.418	Pelodiscus_sinensis
ENSBTAG00000017919	CNOT4	100	73.042	ENSPMGG00000005671	cnot4a	100	72.892	Periophthalmus_magnuspinnatus
ENSBTAG00000017919	CNOT4	100	98.957	ENSPEMG00000021566	Cnot4	100	98.957	Peromyscus_maniculatus_bairdii
ENSBTAG00000017919	CNOT4	100	96.106	ENSPCIG00000029622	CNOT4	96	95.512	Phascolarctos_cinereus
ENSBTAG00000017919	CNOT4	100	61.607	ENSPFOG00000002228	cnot4a	100	59.829	Poecilia_formosa
ENSBTAG00000017919	CNOT4	100	73.182	ENSPLAG00000001780	cnot4a	100	72.576	Poecilia_latipinna
ENSBTAG00000017919	CNOT4	100	73.182	ENSPMEG00000006852	cnot4a	100	72.576	Poecilia_mexicana
ENSBTAG00000017919	CNOT4	100	71.891	ENSPREG00000008171	cnot4a	100	70.722	Poecilia_reticulata
ENSBTAG00000017919	CNOT4	100	98.036	ENSPPYG00000018026	CNOT4	100	98.036	Pongo_abelii
ENSBTAG00000017919	CNOT4	100	99.377	ENSPCOG00000019907	CNOT4	100	99.377	Propithecus_coquereli
ENSBTAG00000017919	CNOT4	97	96.812	ENSPVAG00000004905	CNOT4	90	96.812	Pteropus_vampyrus
ENSBTAG00000017919	CNOT4	100	88.321	ENSPNYG00000004276	cnot4a	92	88.321	Pundamilia_nyererei
ENSBTAG00000017919	CNOT4	100	75.780	ENSPNAG00000008679	cnot4b	100	74.443	Pygocentrus_nattereri
ENSBTAG00000017919	CNOT4	99	91.513	ENSPNAG00000020433	cnot4a	100	71.429	Pygocentrus_nattereri
ENSBTAG00000017919	CNOT4	100	96.914	ENSRNOG00000010795	Cnot4	100	96.914	Rattus_norvegicus
ENSBTAG00000017919	CNOT4	100	99.304	ENSRBIG00000043977	CNOT4	100	99.304	Rhinopithecus_bieti
ENSBTAG00000017919	CNOT4	100	98.435	ENSSBOG00000020808	CNOT4	100	98.435	Saimiri_boliviensis_boliviensis
ENSBTAG00000017919	CNOT4	100	95.792	ENSSHAG00000013639	CNOT4	100	95.792	Sarcophilus_harrisii
ENSBTAG00000017919	CNOT4	99	92.251	ENSSFOG00015017285	CNOT4	91	92.251	Scleropages_formosus
ENSBTAG00000017919	CNOT4	99	90.406	ENSSFOG00015002019	cnot4a	100	72.910	Scleropages_formosus
ENSBTAG00000017919	CNOT4	100	72.632	ENSSMAG00000008614	cnot4a	100	72.372	Scophthalmus_maximus
ENSBTAG00000017919	CNOT4	99	89.299	ENSSDUG00000022635	cnot4a	92	89.299	Seriola_dumerili
ENSBTAG00000017919	CNOT4	100	70.968	ENSSDUG00000018585	cnot4b	100	70.968	Seriola_dumerili
ENSBTAG00000017919	CNOT4	99	89.299	ENSSLDG00000015770	cnot4a	92	89.299	Seriola_lalandi_dorsalis
ENSBTAG00000017919	CNOT4	100	62.745	ENSSLDG00000014347	cnot4b	100	57.143	Seriola_lalandi_dorsalis
ENSBTAG00000017919	CNOT4	100	95.950	ENSSPUG00000004677	CNOT4	100	95.950	Sphenodon_punctatus
ENSBTAG00000017919	CNOT4	99	89.299	ENSSPAG00000012329	cnot4a	92	89.299	Stegastes_partitus
ENSBTAG00000017919	CNOT4	100	99.478	ENSSSCG00000021354	CNOT4	100	99.478	Sus_scrofa
ENSBTAG00000017919	CNOT4	100	88.714	ENSTGUG00000009161	CNOT4	100	88.714	Taeniopygia_guttata
ENSBTAG00000017919	CNOT4	100	72.632	ENSTRUG00000016861	cnot4a	100	71.880	Takifugu_rubripes
ENSBTAG00000017919	CNOT4	100	70.719	ENSTNIG00000016000	cnot4a	100	69.512	Tetraodon_nigroviridis
ENSBTAG00000017919	CNOT4	94	97.417	ENSTBEG00000002202	CNOT4	86	93.452	Tupaia_belangeri
ENSBTAG00000017919	CNOT4	97	98.408	ENSTTRG00000005122	CNOT4	90	98.408	Tursiops_truncatus
ENSBTAG00000017919	CNOT4	100	99.652	ENSUAMG00000026759	CNOT4	100	99.652	Ursus_americanus
ENSBTAG00000017919	CNOT4	100	99.652	ENSUMAG00000015351	CNOT4	100	99.652	Ursus_maritimus
ENSBTAG00000017919	CNOT4	100	99.652	ENSVVUG00000006200	CNOT4	100	99.652	Vulpes_vulpes
ENSBTAG00000017919	CNOT4	100	98.182	ENSXETG00000010594	cnot4	90	98.182	Xenopus_tropicalis
ENSBTAG00000017919	CNOT4	94	72.222	ENSXCOG00000020824	cnot4a	98	70.732	Xiphophorus_couchianus
ENSBTAG00000017919	CNOT4	100	72.300	ENSXMAG00000016984	cnot4a	100	70.845	Xiphophorus_maculatus