EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000018155 (Gene tree)
Gene ID: 613561
Gene Symbol: MRPS18C
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 4972 bases
Position: chr6:98226288-98231259
Accession: 31659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000024161	Ribosomal_S18	PF01084.20	1.2e-22	1	1
ENSBTAP00000065951	Ribosomal_S18	PF01084.20	7.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000067534	-	423	-	ENSBTAP00000065951	140 (aa)	-	-
ENSBTAT00000024161	-	487	-	ENSBTAP00000024161	143 (aa)	-	P82917

Gene Model

Click here to download ENSBTAG00000018155's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000018155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000018155	MRPS18C	100	62.143	ENSBTAG00000049836	-	100	62.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000018155	MRPS18C	100	81.250	ENSG00000163319	MRPS18C	100	81.250	Homo_sapiens
ENSBTAG00000018155	MRPS18C	100	72.727	ENSAMEG00000004915	MRPS18C	100	72.727	Ailuropoda_melanoleuca
ENSBTAG00000018155	MRPS18C	100	71.528	ENSANAG00000028055	-	100	71.528	Aotus_nancymaae
ENSBTAG00000018155	MRPS18C	99	69.333	ENSANAG00000025323	-	95	69.333	Aotus_nancymaae
ENSBTAG00000018155	MRPS18C	100	81.250	ENSCJAG00000042247	MRPS18C	97	81.250	Callithrix_jacchus
ENSBTAG00000018155	MRPS18C	100	81.119	ENSCAFG00020010491	MRPS18C	100	81.119	Canis_lupus_dingo
ENSBTAG00000018155	MRPS18C	97	69.565	ENSCHIG00000018805	-	99	65.957	Capra_hircus
ENSBTAG00000018155	MRPS18C	75	73.148	ENSCHIG00000019359	-	98	73.148	Capra_hircus
ENSBTAG00000018155	MRPS18C	100	57.447	ENSCHIG00000016551	-	100	57.447	Capra_hircus
ENSBTAG00000018155	MRPS18C	100	81.818	ENSCHIG00000022740	-	100	81.818	Capra_hircus
ENSBTAG00000018155	MRPS18C	92	95.420	ENSCHIG00000004461	-	92	95.420	Capra_hircus
ENSBTAG00000018155	MRPS18C	100	79.021	ENSTSYG00000012924	MRPS18C	100	79.021	Carlito_syrichta
ENSBTAG00000018155	MRPS18C	100	76.389	ENSCPOG00000009198	MRPS18C	100	76.389	Cavia_porcellus
ENSBTAG00000018155	MRPS18C	100	81.944	ENSCCAG00000026577	-	100	81.944	Cebus_capucinus
ENSBTAG00000018155	MRPS18C	100	70.833	ENSCCAG00000028283	-	100	70.833	Cebus_capucinus
ENSBTAG00000018155	MRPS18C	99	67.832	ENSCCAG00000025155	-	95	67.832	Cebus_capucinus
ENSBTAG00000018155	MRPS18C	100	80.556	ENSCCAG00000019347	-	100	80.556	Cebus_capucinus
ENSBTAG00000018155	MRPS18C	100	83.333	ENSCATG00000040697	MRPS18C	100	83.333	Cercocebus_atys
ENSBTAG00000018155	MRPS18C	100	78.767	ENSCLAG00000008205	-	100	78.767	Chinchilla_lanigera
ENSBTAG00000018155	MRPS18C	100	78.472	ENSCLAG00000017397	-	100	78.472	Chinchilla_lanigera
ENSBTAG00000018155	MRPS18C	99	59.155	ENSCANG00000037347	-	100	57.343	Colobus_angolensis_palliatus
ENSBTAG00000018155	MRPS18C	100	67.832	ENSCANG00000041165	-	100	67.832	Colobus_angolensis_palliatus
ENSBTAG00000018155	MRPS18C	100	83.333	ENSCANG00000038907	MRPS18C	100	83.333	Colobus_angolensis_palliatus
ENSBTAG00000018155	MRPS18C	100	78.472	ENSCGRG00001000103	Mrps18c	100	78.472	Cricetulus_griseus_chok1gshd
ENSBTAG00000018155	MRPS18C	100	78.472	ENSCGRG00000002192	Mrps18c	100	78.472	Cricetulus_griseus_crigri
ENSBTAG00000018155	MRPS18C	99	76.761	ENSDORG00000012749	Mrps18c	100	76.761	Dipodomys_ordii
ENSBTAG00000018155	MRPS18C	100	52.113	ENSETEG00000012223	-	100	52.113	Echinops_telfairi
ENSBTAG00000018155	MRPS18C	100	84.615	ENSEASG00005013234	MRPS18C	100	84.615	Equus_asinus_asinus
ENSBTAG00000018155	MRPS18C	100	84.615	ENSECAG00000020387	MRPS18C	100	84.615	Equus_caballus
ENSBTAG00000018155	MRPS18C	100	59.441	ENSEEUG00000003504	MRPS18C	99	59.441	Erinaceus_europaeus
ENSBTAG00000018155	MRPS18C	100	79.720	ENSFCAG00000042464	MRPS18C	100	79.720	Felis_catus
ENSBTAG00000018155	MRPS18C	100	77.622	ENSFDAG00000000250	-	100	77.622	Fukomys_damarensis
ENSBTAG00000018155	MRPS18C	100	65.734	ENSFDAG00000008778	-	100	65.734	Fukomys_damarensis
ENSBTAG00000018155	MRPS18C	100	59.028	ENSGGOG00000040785	-	100	59.028	Gorilla_gorilla
ENSBTAG00000018155	MRPS18C	100	66.667	ENSGGOG00000008603	MRPS18C	100	66.667	Gorilla_gorilla
ENSBTAG00000018155	MRPS18C	100	53.472	ENSGGOG00000037903	-	100	53.472	Gorilla_gorilla
ENSBTAG00000018155	MRPS18C	100	73.611	ENSHGLG00000020134	-	100	73.611	Heterocephalus_glaber_female
ENSBTAG00000018155	MRPS18C	100	78.767	ENSHGLG00000002953	-	100	78.767	Heterocephalus_glaber_female
ENSBTAG00000018155	MRPS18C	100	70.833	ENSHGLG00000012671	-	98	70.833	Heterocephalus_glaber_female
ENSBTAG00000018155	MRPS18C	100	70.833	ENSHGLG00100015568	-	98	70.833	Heterocephalus_glaber_male
ENSBTAG00000018155	MRPS18C	100	73.611	ENSHGLG00100019678	-	100	73.611	Heterocephalus_glaber_male
ENSBTAG00000018155	MRPS18C	100	78.767	ENSHGLG00100016235	-	100	78.767	Heterocephalus_glaber_male
ENSBTAG00000018155	MRPS18C	100	85.417	ENSSTOG00000007989	MRPS18C	100	85.417	Ictidomys_tridecemlineatus
ENSBTAG00000018155	MRPS18C	50	87.500	ENSJJAG00000022437	Mrps18c	68	93.939	Jaculus_jaculus
ENSBTAG00000018155	MRPS18C	100	79.861	ENSLAFG00000001059	MRPS18C	100	79.861	Loxodonta_africana
ENSBTAG00000018155	MRPS18C	100	83.333	ENSMFAG00000003991	MRPS18C	100	83.333	Macaca_fascicularis
ENSBTAG00000018155	MRPS18C	100	63.194	ENSMFAG00000041276	-	100	63.194	Macaca_fascicularis
ENSBTAG00000018155	MRPS18C	100	70.833	ENSMMUG00000048717	-	100	70.833	Macaca_mulatta
ENSBTAG00000018155	MRPS18C	100	68.750	ENSMMUG00000039146	-	100	68.750	Macaca_mulatta
ENSBTAG00000018155	MRPS18C	100	66.667	ENSMMUG00000015353	MRPS18C	100	66.667	Macaca_mulatta
ENSBTAG00000018155	MRPS18C	100	60.839	ENSMNEG00000018700	-	100	60.839	Macaca_nemestrina
ENSBTAG00000018155	MRPS18C	100	83.333	ENSMNEG00000043663	MRPS18C	100	83.333	Macaca_nemestrina
ENSBTAG00000018155	MRPS18C	100	83.333	ENSMLEG00000038884	MRPS18C	100	83.333	Mandrillus_leucophaeus
ENSBTAG00000018155	MRPS18C	100	63.121	ENSMICG00000037615	-	100	63.121	Microcebus_murinus
ENSBTAG00000018155	MRPS18C	100	81.250	ENSMICG00000032609	-	100	81.250	Microcebus_murinus
ENSBTAG00000018155	MRPS18C	100	76.389	ENSMOCG00000009898	-	100	76.389	Microtus_ochrogaster
ENSBTAG00000018155	MRPS18C	100	76.389	ENSMOCG00000015591	-	100	76.389	Microtus_ochrogaster
ENSBTAG00000018155	MRPS18C	99	72.222	ENSMODG00000020773	MRPS18C	100	72.222	Monodelphis_domestica
ENSBTAG00000018155	MRPS18C	100	80.137	MGP_CAROLIEiJ_G0027458	Mrps18c	100	80.137	Mus_caroli
ENSBTAG00000018155	MRPS18C	100	78.767	ENSMUSG00000016833	Mrps18c	100	78.767	Mus_musculus
ENSBTAG00000018155	MRPS18C	100	80.137	MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	Mus_pahari
ENSBTAG00000018155	MRPS18C	83	76.230	MGP_SPRETEiJ_G0028455	Mrps18c	93	76.230	Mus_spretus
ENSBTAG00000018155	MRPS18C	100	83.916	ENSMLUG00000017057	MRPS18C	100	83.916	Myotis_lucifugus
ENSBTAG00000018155	MRPS18C	88	85.039	ENSNGAG00000015980	Mrps18c	100	79.167	Nannospalax_galili
ENSBTAG00000018155	MRPS18C	100	81.250	ENSNLEG00000009119	MRPS18C	100	81.250	Nomascus_leucogenys
ENSBTAG00000018155	MRPS18C	100	75.000	ENSNLEG00000018188	-	100	75.000	Nomascus_leucogenys
ENSBTAG00000018155	MRPS18C	69	70.408	ENSOPRG00000004113	MRPS18C	68	70.408	Ochotona_princeps
ENSBTAG00000018155	MRPS18C	100	76.027	ENSODEG00000007599	-	100	76.027	Octodon_degus
ENSBTAG00000018155	MRPS18C	100	77.083	ENSODEG00000020349	-	100	77.083	Octodon_degus
ENSBTAG00000018155	MRPS18C	100	93.007	ENSOARG00000002770	MRPS18C	100	93.007	Ovis_aries
ENSBTAG00000018155	MRPS18C	100	81.250	ENSPPAG00000037122	MRPS18C	100	81.250	Pan_paniscus
ENSBTAG00000018155	MRPS18C	100	54.610	ENSPPAG00000037400	-	100	54.610	Pan_paniscus
ENSBTAG00000018155	MRPS18C	100	79.021	ENSPPRG00000011089	MRPS18C	100	79.021	Panthera_pardus
ENSBTAG00000018155	MRPS18C	100	79.720	ENSPTIG00000021242	MRPS18C	100	79.720	Panthera_tigris_altaica
ENSBTAG00000018155	MRPS18C	100	53.191	ENSPTRG00000047058	-	100	53.191	Pan_troglodytes
ENSBTAG00000018155	MRPS18C	100	81.250	ENSPTRG00000016233	MRPS18C	100	81.250	Pan_troglodytes
ENSBTAG00000018155	MRPS18C	100	81.944	ENSPANG00000033931	MRPS18C	100	81.944	Papio_anubis
ENSBTAG00000018155	MRPS18C	100	68.750	ENSPANG00000034202	-	100	68.750	Papio_anubis
ENSBTAG00000018155	MRPS18C	100	79.167	ENSPEMG00000008390	Mrps18c	100	79.167	Peromyscus_maniculatus_bairdii
ENSBTAG00000018155	MRPS18C	99	70.423	ENSPCIG00000005376	-	100	70.423	Phascolarctos_cinereus
ENSBTAG00000018155	MRPS18C	71	86.275	ENSPCIG00000019737	-	100	86.275	Phascolarctos_cinereus
ENSBTAG00000018155	MRPS18C	98	60.714	ENSPCIG00000000097	-	99	60.714	Phascolarctos_cinereus
ENSBTAG00000018155	MRPS18C	100	81.944	ENSPPYG00000025867	MRPS18C	100	81.944	Pongo_abelii
ENSBTAG00000018155	MRPS18C	99	76.761	ENSPPYG00000025835	-	99	76.761	Pongo_abelii
ENSBTAG00000018155	MRPS18C	100	73.611	ENSPCAG00000004975	MRPS18C	100	73.611	Procavia_capensis
ENSBTAG00000018155	MRPS18C	100	81.944	ENSPCOG00000017634	MRPS18C	100	81.944	Propithecus_coquereli
ENSBTAG00000018155	MRPS18C	69	79.592	ENSPVAG00000006439	MRPS18C	100	79.592	Pteropus_vampyrus
ENSBTAG00000018155	MRPS18C	100	76.712	ENSRNOG00000002178	Mrps18c	100	76.712	Rattus_norvegicus
ENSBTAG00000018155	MRPS18C	100	72.028	ENSRBIG00000035023	-	100	72.028	Rhinopithecus_bieti
ENSBTAG00000018155	MRPS18C	100	53.846	ENSRBIG00000031637	-	100	53.846	Rhinopithecus_bieti
ENSBTAG00000018155	MRPS18C	100	83.333	ENSRBIG00000041685	MRPS18C	100	83.333	Rhinopithecus_bieti
ENSBTAG00000018155	MRPS18C	100	72.028	ENSRROG00000033834	-	100	72.028	Rhinopithecus_roxellana
ENSBTAG00000018155	MRPS18C	100	83.333	ENSRROG00000044334	MRPS18C	100	83.333	Rhinopithecus_roxellana
ENSBTAG00000018155	MRPS18C	100	54.545	ENSRROG00000030722	-	100	54.545	Rhinopithecus_roxellana
ENSBTAG00000018155	MRPS18C	99	70.629	ENSSBOG00000022205	-	92	70.629	Saimiri_boliviensis_boliviensis
ENSBTAG00000018155	MRPS18C	99	66.434	ENSSBOG00000032292	-	100	66.434	Saimiri_boliviensis_boliviensis
ENSBTAG00000018155	MRPS18C	100	62.937	ENSSBOG00000029234	-	100	62.937	Saimiri_boliviensis_boliviensis
ENSBTAG00000018155	MRPS18C	100	81.250	ENSSBOG00000027568	-	100	81.250	Saimiri_boliviensis_boliviensis
ENSBTAG00000018155	MRPS18C	76	89.815	ENSSHAG00000007084	MRPS18C	76	89.815	Sarcophilus_harrisii
ENSBTAG00000018155	MRPS18C	100	86.014	ENSSSCG00000038042	MRPS18C	100	86.014	Sus_scrofa
ENSBTAG00000018155	MRPS18C	100	77.083	ENSTBEG00000012505	MRPS18C	100	77.083	Tupaia_belangeri
ENSBTAG00000018155	MRPS18C	100	85.315	ENSTTRG00000004897	MRPS18C	100	85.315	Tursiops_truncatus
ENSBTAG00000018155	MRPS18C	100	83.217	ENSUAMG00000012878	MRPS18C	100	83.217	Ursus_americanus
ENSBTAG00000018155	MRPS18C	100	83.217	ENSUMAG00000008829	MRPS18C	100	83.217	Ursus_maritimus
ENSBTAG00000018155	MRPS18C	100	81.818	ENSVPAG00000011358	MRPS18C	100	81.818	Vicugna_pacos
ENSBTAG00000018155	MRPS18C	100	81.119	ENSVVUG00000015672	MRPS18C	100	81.119	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005743	mitochondrial inner membrane	-	TAS	Component
GO:0005763	mitochondrial small ribosomal subunit	24799711.	IDA	Component
GO:0006412	translation	-	IEA	Process