EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000018361 (Gene tree)
Gene ID: 613499
Gene Symbol: R3HDM2
Alias: -
Full Name: Bos taurus R3H domain containing 2 (R3HDM2)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 110191 bases
Position: chr5:56081334-56191524
Accession: NM_001078034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000024431	R3H	PF01424.22	5.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000024431	-	3739	XM_024992136	ENSBTAP00000024431	989 (aa)	XP_024847904	A0JNC2

Gene Model

Click here to download ENSBTAG00000018361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000018361's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000018361	R3HDM2	96	57.702	ENSBTAG00000013302	R3HDM1	84	64.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000018361	R3HDM2	100	97.576	ENSG00000179912	R3HDM2	100	100.000	Homo_sapiens
ENSBTAG00000018361	R3HDM2	99	65.761	ENSAPOG00000020341	r3hdm2	96	67.608	Acanthochromis_polyacanthus
ENSBTAG00000018361	R3HDM2	100	92.639	ENSAMEG00000004812	R3HDM2	100	92.639	Ailuropoda_melanoleuca
ENSBTAG00000018361	R3HDM2	93	65.892	ENSACIG00000016146	r3hdm2	98	65.539	Amphilophus_citrinellus
ENSBTAG00000018361	R3HDM2	99	63.870	ENSAOCG00000023694	r3hdm2	99	64.538	Amphiprion_ocellaris
ENSBTAG00000018361	R3HDM2	99	65.664	ENSAPEG00000008851	r3hdm2	100	66.525	Amphiprion_percula
ENSBTAG00000018361	R3HDM2	94	68.344	ENSATEG00000025024	r3hdm2	100	68.835	Anabas_testudineus
ENSBTAG00000018361	R3HDM2	100	83.538	ENSAPLG00000004298	R3HDM2	94	83.374	Anas_platyrhynchos
ENSBTAG00000018361	R3HDM2	100	82.220	ENSACAG00000006388	R3HDM2	100	82.220	Anolis_carolinensis
ENSBTAG00000018361	R3HDM2	100	97.573	ENSANAG00000025397	-	100	97.573	Aotus_nancymaae
ENSBTAG00000018361	R3HDM2	98	92.982	ENSANAG00000031310	-	100	92.982	Aotus_nancymaae
ENSBTAG00000018361	R3HDM2	99	63.403	ENSACLG00000019106	r3hdm2	96	66.534	Astatotilapia_calliptera
ENSBTAG00000018361	R3HDM2	94	59.814	ENSAMXG00000017180	r3hdm2	99	60.496	Astyanax_mexicanus
ENSBTAG00000018361	R3HDM2	100	97.068	ENSCJAG00000007365	R3HDM2	100	97.068	Callithrix_jacchus
ENSBTAG00000018361	R3HDM2	100	97.183	ENSCAFG00000000215	R3HDM2	100	97.183	Canis_familiaris
ENSBTAG00000018361	R3HDM2	100	97.175	ENSCAFG00020023713	R3HDM2	100	97.175	Canis_lupus_dingo
ENSBTAG00000018361	R3HDM2	100	99.393	ENSCHIG00000014022	R3HDM2	100	99.393	Capra_hircus
ENSBTAG00000018361	R3HDM2	100	94.372	ENSTSYG00000001449	R3HDM2	100	95.678	Carlito_syrichta
ENSBTAG00000018361	R3HDM2	100	94.237	ENSCPOG00000009217	R3HDM2	100	94.237	Cavia_porcellus
ENSBTAG00000018361	R3HDM2	89	97.374	ENSCCAG00000026083	R3HDM2	100	97.374	Cebus_capucinus
ENSBTAG00000018361	R3HDM2	100	97.374	ENSCATG00000036929	R3HDM2	100	97.374	Cercocebus_atys
ENSBTAG00000018361	R3HDM2	100	94.461	ENSCLAG00000011997	R3HDM2	100	94.461	Chinchilla_lanigera
ENSBTAG00000018361	R3HDM2	100	93.872	ENSCSAG00000004911	R3HDM2	100	93.872	Chlorocebus_sabaeus
ENSBTAG00000018361	R3HDM2	75	91.096	ENSCHOG00000005636	R3HDM2	87	91.096	Choloepus_hoffmanni
ENSBTAG00000018361	R3HDM2	100	78.785	ENSCPBG00000013922	R3HDM2	100	78.998	Chrysemys_picta_bellii
ENSBTAG00000018361	R3HDM2	100	97.371	ENSCANG00000043807	R3HDM2	100	97.371	Colobus_angolensis_palliatus
ENSBTAG00000018361	R3HDM2	100	94.058	ENSCGRG00001017324	R3hdm2	100	94.058	Cricetulus_griseus_chok1gshd
ENSBTAG00000018361	R3HDM2	100	91.479	ENSCGRG00000003862	R3hdm2	100	91.479	Cricetulus_griseus_crigri
ENSBTAG00000018361	R3HDM2	96	65.153	ENSCSEG00000010925	r3hdm2	100	65.301	Cynoglossus_semilaevis
ENSBTAG00000018361	R3HDM2	96	63.807	ENSCVAG00000009058	r3hdm2	100	63.588	Cyprinodon_variegatus
ENSBTAG00000018361	R3HDM2	93	65.565	ENSDARG00000102610	r3hdm2	99	65.815	Danio_rerio
ENSBTAG00000018361	R3HDM2	100	93.127	ENSDNOG00000015033	R3HDM2	100	96.524	Dasypus_novemcinctus
ENSBTAG00000018361	R3HDM2	94	91.483	ENSDORG00000011462	R3hdm2	99	91.483	Dipodomys_ordii
ENSBTAG00000018361	R3HDM2	100	97.379	ENSEASG00005007091	R3HDM2	100	97.379	Equus_asinus_asinus
ENSBTAG00000018361	R3HDM2	100	97.776	ENSECAG00000003157	R3HDM2	100	97.776	Equus_caballus
ENSBTAG00000018361	R3HDM2	96	63.259	ENSELUG00000015969	r3hdm2	100	61.186	Esox_lucius
ENSBTAG00000018361	R3HDM2	100	96.036	ENSFCAG00000000192	R3HDM2	100	95.762	Felis_catus
ENSBTAG00000018361	R3HDM2	89	80.645	ENSFALG00000000255	R3HDM2	100	72.838	Ficedula_albicollis
ENSBTAG00000018361	R3HDM2	100	93.568	ENSFDAG00000019385	R3HDM2	100	94.673	Fukomys_damarensis
ENSBTAG00000018361	R3HDM2	99	62.882	ENSFHEG00000016484	r3hdm2	99	64.786	Fundulus_heteroclitus
ENSBTAG00000018361	R3HDM2	95	62.648	ENSGMOG00000007961	r3hdm2	95	65.665	Gadus_morhua
ENSBTAG00000018361	R3HDM2	100	79.863	ENSGALG00000043736	R3HDM2	100	77.091	Gallus_gallus
ENSBTAG00000018361	R3HDM2	99	63.148	ENSGAFG00000013887	r3hdm2	100	63.938	Gambusia_affinis
ENSBTAG00000018361	R3HDM2	95	63.717	ENSGACG00000006442	r3hdm2	100	65.779	Gasterosteus_aculeatus
ENSBTAG00000018361	R3HDM2	100	80.490	ENSGAGG00000017797	R3HDM2	100	80.392	Gopherus_agassizii
ENSBTAG00000018361	R3HDM2	100	97.475	ENSGGOG00000015007	R3HDM2	100	97.475	Gorilla_gorilla
ENSBTAG00000018361	R3HDM2	88	87.557	ENSHGLG00000010421	-	97	87.557	Heterocephalus_glaber_female
ENSBTAG00000018361	R3HDM2	100	91.618	ENSHGLG00000010434	-	100	91.618	Heterocephalus_glaber_female
ENSBTAG00000018361	R3HDM2	96	84.194	ENSHGLG00100018871	-	99	84.194	Heterocephalus_glaber_male
ENSBTAG00000018361	R3HDM2	100	94.657	ENSHGLG00100004183	-	100	94.657	Heterocephalus_glaber_male
ENSBTAG00000018361	R3HDM2	99	63.681	ENSHCOG00000001142	r3hdm2	96	64.647	Hippocampus_comes
ENSBTAG00000018361	R3HDM2	98	73.236	ENSIPUG00000023873	r3hdm2	96	63.372	Ictalurus_punctatus
ENSBTAG00000018361	R3HDM2	100	91.239	ENSSTOG00000013424	R3HDM2	100	92.548	Ictidomys_tridecemlineatus
ENSBTAG00000018361	R3HDM2	100	92.285	ENSJJAG00000010001	R3hdm2	100	92.383	Jaculus_jaculus
ENSBTAG00000018361	R3HDM2	93	68.743	ENSKMAG00000012695	r3hdm2	99	67.759	Kryptolebias_marmoratus
ENSBTAG00000018361	R3HDM2	96	65.381	ENSLBEG00000013115	r3hdm2	92	65.377	Labrus_bergylta
ENSBTAG00000018361	R3HDM2	94	68.618	ENSLACG00000019064	r3hdm2	100	68.718	Latimeria_chalumnae
ENSBTAG00000018361	R3HDM2	100	70.698	ENSLOCG00000005976	r3hdm2	100	70.993	Lepisosteus_oculatus
ENSBTAG00000018361	R3HDM2	100	90.421	ENSLAFG00000006510	R3HDM2	100	90.421	Loxodonta_africana
ENSBTAG00000018361	R3HDM2	100	97.376	ENSMFAG00000036385	R3HDM2	100	97.376	Macaca_fascicularis
ENSBTAG00000018361	R3HDM2	100	97.376	ENSMMUG00000021789	R3HDM2	100	97.376	Macaca_mulatta
ENSBTAG00000018361	R3HDM2	100	97.278	ENSMNEG00000025314	R3HDM2	100	97.278	Macaca_nemestrina
ENSBTAG00000018361	R3HDM2	100	97.475	ENSMLEG00000028915	R3HDM2	100	97.475	Mandrillus_leucophaeus
ENSBTAG00000018361	R3HDM2	99	63.223	ENSMAMG00000009793	r3hdm2	99	63.394	Mastacembelus_armatus
ENSBTAG00000018361	R3HDM2	99	63.403	ENSMZEG00005007319	r3hdm2	96	66.534	Maylandia_zebra
ENSBTAG00000018361	R3HDM2	100	97.186	ENSMICG00000012389	R3HDM2	100	97.186	Microcebus_murinus
ENSBTAG00000018361	R3HDM2	100	94.349	ENSMOCG00000014425	R3hdm2	100	94.349	Microtus_ochrogaster
ENSBTAG00000018361	R3HDM2	95	66.632	ENSMMOG00000007448	r3hdm2	99	65.964	Mola_mola
ENSBTAG00000018361	R3HDM2	95	60.892	ENSMALG00000010211	r3hdm2	98	59.425	Monopterus_albus
ENSBTAG00000018361	R3HDM2	100	94.864	MGP_CAROLIEiJ_G0015896	R3hdm2	100	94.864	Mus_caroli
ENSBTAG00000018361	R3HDM2	100	95.161	ENSMUSG00000025404	R3hdm2	100	95.161	Mus_musculus
ENSBTAG00000018361	R3HDM2	100	95.248	MGP_PahariEiJ_G0031189	R3hdm2	100	95.248	Mus_pahari
ENSBTAG00000018361	R3HDM2	100	94.769	MGP_SPRETEiJ_G0016722	R3hdm2	100	94.769	Mus_spretus
ENSBTAG00000018361	R3HDM2	98	89.515	ENSMPUG00000001818	R3HDM2	98	90.288	Mustela_putorius_furo
ENSBTAG00000018361	R3HDM2	100	92.226	ENSMLUG00000004980	R3HDM2	100	92.226	Myotis_lucifugus
ENSBTAG00000018361	R3HDM2	100	96.259	ENSNGAG00000018800	R3hdm2	100	96.259	Nannospalax_galili
ENSBTAG00000018361	R3HDM2	94	65.000	ENSNBRG00000004483	r3hdm2	99	66.143	Neolamprologus_brichardi
ENSBTAG00000018361	R3HDM2	100	97.472	ENSNLEG00000017351	R3HDM2	100	97.472	Nomascus_leucogenys
ENSBTAG00000018361	R3HDM2	99	80.920	ENSMEUG00000008588	R3HDM2	100	80.729	Notamacropus_eugenii
ENSBTAG00000018361	R3HDM2	100	84.836	ENSOPRG00000013670	R3HDM2	100	84.836	Ochotona_princeps
ENSBTAG00000018361	R3HDM2	99	66.535	ENSONIG00000005075	r3hdm2	96	69.413	Oreochromis_niloticus
ENSBTAG00000018361	R3HDM2	100	91.126	ENSOCUG00000013258	R3HDM2	100	91.126	Oryctolagus_cuniculus
ENSBTAG00000018361	R3HDM2	99	64.202	ENSORLG00000005502	r3hdm2	96	64.976	Oryzias_latipes
ENSBTAG00000018361	R3HDM2	99	63.027	ENSORLG00020017069	r3hdm2	99	63.854	Oryzias_latipes_hni
ENSBTAG00000018361	R3HDM2	99	63.123	ENSORLG00015012735	r3hdm2	99	63.950	Oryzias_latipes_hsok
ENSBTAG00000018361	R3HDM2	99	59.803	ENSOMEG00000018079	r3hdm2	99	61.029	Oryzias_melastigma
ENSBTAG00000018361	R3HDM2	100	88.985	ENSOGAG00000012055	R3HDM2	100	88.985	Otolemur_garnettii
ENSBTAG00000018361	R3HDM2	96	83.438	ENSOGAG00000027966	-	99	83.070	Otolemur_garnettii
ENSBTAG00000018361	R3HDM2	100	98.992	ENSOARG00000006929	R3HDM2	100	98.992	Ovis_aries
ENSBTAG00000018361	R3HDM2	100	97.576	ENSPPAG00000034395	R3HDM2	100	97.576	Pan_paniscus
ENSBTAG00000018361	R3HDM2	100	97.780	ENSPPRG00000009240	R3HDM2	100	97.780	Panthera_pardus
ENSBTAG00000018361	R3HDM2	100	97.780	ENSPTIG00000008752	R3HDM2	100	97.780	Panthera_tigris_altaica
ENSBTAG00000018361	R3HDM2	100	97.477	ENSPTRG00000046457	R3HDM2	100	97.477	Pan_troglodytes
ENSBTAG00000018361	R3HDM2	98	96.193	ENSPANG00000024002	R3HDM2	100	96.193	Papio_anubis
ENSBTAG00000018361	R3HDM2	95	66.800	ENSPKIG00000003171	r3hdm2	97	66.004	Paramormyrops_kingsleyae
ENSBTAG00000018361	R3HDM2	63	73.386	ENSPSIG00000006954	R3HDM2	100	73.543	Pelodiscus_sinensis
ENSBTAG00000018361	R3HDM2	93	69.551	ENSPMGG00000007061	r3hdm2	99	69.091	Periophthalmus_magnuspinnatus
ENSBTAG00000018361	R3HDM2	100	93.939	ENSPEMG00000015964	R3hdm2	100	93.939	Peromyscus_maniculatus_bairdii
ENSBTAG00000018361	R3HDM2	100	91.028	ENSPCIG00000023841	R3HDM2	100	90.423	Phascolarctos_cinereus
ENSBTAG00000018361	R3HDM2	94	70.789	ENSPFOG00000006077	r3hdm2	98	72.632	Poecilia_formosa
ENSBTAG00000018361	R3HDM2	99	64.431	ENSPLAG00000002971	r3hdm2	99	64.431	Poecilia_latipinna
ENSBTAG00000018361	R3HDM2	99	64.431	ENSPMEG00000005330	r3hdm2	99	64.431	Poecilia_mexicana
ENSBTAG00000018361	R3HDM2	99	64.431	ENSPREG00000008424	r3hdm2	99	64.431	Poecilia_reticulata
ENSBTAG00000018361	R3HDM2	98	89.170	ENSPPYG00000004685	R3HDM2	81	88.911	Pongo_abelii
ENSBTAG00000018361	R3HDM2	88	93.750	ENSPCAG00000014642	R3HDM2	91	95.455	Procavia_capensis
ENSBTAG00000018361	R3HDM2	100	97.376	ENSPCOG00000013201	R3HDM2	100	97.376	Propithecus_coquereli
ENSBTAG00000018361	R3HDM2	100	92.507	ENSPVAG00000003967	R3HDM2	100	92.507	Pteropus_vampyrus
ENSBTAG00000018361	R3HDM2	94	65.281	ENSPNYG00000013479	r3hdm2	100	65.866	Pundamilia_nyererei
ENSBTAG00000018361	R3HDM2	99	62.931	ENSPNAG00000017473	r3hdm2	96	65.079	Pygocentrus_nattereri
ENSBTAG00000018361	R3HDM2	100	93.656	ENSRNOG00000007801	R3hdm2	100	93.656	Rattus_norvegicus
ENSBTAG00000018361	R3HDM2	100	94.742	ENSRBIG00000037403	R3HDM2	100	94.439	Rhinopithecus_bieti
ENSBTAG00000018361	R3HDM2	100	97.472	ENSRROG00000022271	R3HDM2	100	97.472	Rhinopithecus_roxellana
ENSBTAG00000018361	R3HDM2	100	97.573	ENSSBOG00000023547	R3HDM2	100	97.573	Saimiri_boliviensis_boliviensis
ENSBTAG00000018361	R3HDM2	100	83.206	ENSSHAG00000003511	R3HDM2	99	91.581	Sarcophilus_harrisii
ENSBTAG00000018361	R3HDM2	94	71.338	ENSSFOG00015011219	r3hdm2	99	69.415	Scleropages_formosus
ENSBTAG00000018361	R3HDM2	99	64.300	ENSSMAG00000012073	r3hdm2	100	65.268	Scophthalmus_maximus
ENSBTAG00000018361	R3HDM2	99	65.858	ENSSDUG00000019269	r3hdm2	100	64.792	Seriola_dumerili
ENSBTAG00000018361	R3HDM2	99	64.183	ENSSLDG00000005252	r3hdm2	100	65.792	Seriola_lalandi_dorsalis
ENSBTAG00000018361	R3HDM2	93	90.406	ENSSARG00000003958	R3HDM2	94	90.406	Sorex_araneus
ENSBTAG00000018361	R3HDM2	100	78.676	ENSSPUG00000014132	R3HDM2	100	78.481	Sphenodon_punctatus
ENSBTAG00000018361	R3HDM2	95	67.306	ENSSPAG00000022594	r3hdm2	100	66.489	Stegastes_partitus
ENSBTAG00000018361	R3HDM2	100	98.079	ENSSSCG00000026498	R3HDM2	100	98.079	Sus_scrofa
ENSBTAG00000018361	R3HDM2	72	76.016	ENSTGUG00000015881	R3HDM2	100	75.853	Taeniopygia_guttata
ENSBTAG00000018361	R3HDM2	95	63.402	ENSTRUG00000015075	r3hdm2	99	64.153	Takifugu_rubripes
ENSBTAG00000018361	R3HDM2	90	76.724	ENSTNIG00000007057	r3hdm2	87	78.448	Tetraodon_nigroviridis
ENSBTAG00000018361	R3HDM2	80	97.133	ENSTBEG00000015967	R3HDM2	81	97.133	Tupaia_belangeri
ENSBTAG00000018361	R3HDM2	96	93.763	ENSTTRG00000013082	R3HDM2	93	93.763	Tursiops_truncatus
ENSBTAG00000018361	R3HDM2	100	97.679	ENSUAMG00000020913	R3HDM2	100	94.439	Ursus_americanus
ENSBTAG00000018361	R3HDM2	100	91.037	ENSUMAG00000019179	R3HDM2	100	92.044	Ursus_maritimus
ENSBTAG00000018361	R3HDM2	100	86.852	ENSVPAG00000008656	R3HDM2	100	86.852	Vicugna_pacos
ENSBTAG00000018361	R3HDM2	98	93.936	ENSVVUG00000018014	R3HDM2	97	93.936	Vulpes_vulpes
ENSBTAG00000018361	R3HDM2	100	73.769	ENSXETG00000017153	r3hdm2	100	72.892	Xenopus_tropicalis
ENSBTAG00000018361	R3HDM2	86	63.117	ENSXCOG00000013882	r3hdm2	100	63.453	Xiphophorus_couchianus
ENSBTAG00000018361	R3HDM2	99	62.571	ENSXMAG00000017978	r3hdm2	100	63.453	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component