EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSBTAG00000018488 (Gene tree)
Gene ID
781149
Gene Symbol
AFF1
Alias
-
Full Name
Bos taurus AF4/FMR2 family member 1 (AFF1)%2C mRNA.
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Plus strand
Length
193074 bases
Position
chr6:101852659-102045732
Accession
NM_001191525
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000069534AF-4PF05110.13011
ENSBTAP00000024607AF-4PF05110.13011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000024607-4965-ENSBTAP000000246071221 (aa)-E1BHU6
ENSBTAT00000070038-3992-ENSBTAP000000695341228 (aa)XP_010804602UPI000D534945
Gene Model
Click here to download ENSBTAG00000018488's gene model file
Pathways
Pathway IDPathway NameSource
bta05202Transcriptional misregulation in cancerKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000018488's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSBTAG00000018488AFF18536.086ENSBTAG00000012449AFF35960.811
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000018488AFF18742.322ENSG00000155966AFF25942.481Homo_sapiens
ENSBTAG00000018488AFF110080.130ENSG00000172493AFF19986.441Homo_sapiens
ENSBTAG00000018488AFF18364.789ENSAPOG00000006096aff49935.647Acanthochromis_polyacanthus
ENSBTAG00000018488AFF110080.384ENSAMEG00000003337AFF110080.760Ailuropoda_melanoleuca
ENSBTAG00000018488AFF15780.000ENSACIG00000022732aff25357.143Amphilophus_citrinellus
ENSBTAG00000018488AFF15831.158ENSACIG00000010525aff49031.208Amphilophus_citrinellus
ENSBTAG00000018488AFF17935.714ENSATEG00000010963aff45933.605Anabas_testudineus
ENSBTAG00000018488AFF15147.253ENSAPLG00000003660-6347.619Anas_platyrhynchos
ENSBTAG00000018488AFF19954.093ENSAPLG00000004059AFF15850.826Anas_platyrhynchos
ENSBTAG00000018488AFF19951.885ENSACAG00000012192AFF15851.604Anolis_carolinensis
ENSBTAG00000018488AFF19937.739ENSACAG00000022605AFF45934.379Anolis_carolinensis
ENSBTAG00000018488AFF18742.697ENSANAG00000023509AFF25941.948Aotus_nancymaae
ENSBTAG00000018488AFF110078.300ENSANAG00000017095AFF110078.905Aotus_nancymaae
ENSBTAG00000018488AFF17035.417ENSACLG00000002905-6138.509Astatotilapia_calliptera
ENSBTAG00000018488AFF16461.194ENSAMXG00000020137aff46463.014Astyanax_mexicanus
ENSBTAG00000018488AFF110077.166ENSCJAG00000006047AFF110077.697Callithrix_jacchus
ENSBTAG00000018488AFF18742.322ENSCJAG00000000061AFF26341.573Callithrix_jacchus
ENSBTAG00000018488AFF110081.568ENSCAFG00000009476AFF110081.671Canis_familiaris
ENSBTAG00000018488AFF16860.000ENSCAFG00000023079AFF35860.000Canis_familiaris
ENSBTAG00000018488AFF110097.396ENSCHIG00000008450AFF110097.396Capra_hircus
ENSBTAG00000018488AFF16773.824ENSTSYG00000002039AFF110073.583Carlito_syrichta
ENSBTAG00000018488AFF15241.948ENSTSYG00000000526AFF26441.199Carlito_syrichta
ENSBTAG00000018488AFF16558.108ENSCAPG00000012999AFF35158.108Cavia_aperea
ENSBTAG00000018488AFF19958.327ENSCAPG00000006540AFF15959.889Cavia_aperea
ENSBTAG00000018488AFF19963.666ENSCPOG00000034568AFF110064.234Cavia_porcellus
ENSBTAG00000018488AFF18742.697ENSCCAG00000025994AFF25942.481Cebus_capucinus
ENSBTAG00000018488AFF19181.728ENSCCAG00000027623AFF19982.963Cebus_capucinus
ENSBTAG00000018488AFF110080.419ENSCATG00000039501AFF110080.177Cercocebus_atys
ENSBTAG00000018488AFF18742.322ENSCATG00000040342AFF26142.105Cercocebus_atys
ENSBTAG00000018488AFF16844.297ENSCATG00000044510AFF45934.444Cercocebus_atys
ENSBTAG00000018488AFF19965.994ENSCLAG00000005537AFF110065.012Chinchilla_lanigera
ENSBTAG00000018488AFF17346.442ENSCLAG00000017100AFF37759.494Chinchilla_lanigera
ENSBTAG00000018488AFF110079.660ENSCSAG00000004333AFF110079.741Chlorocebus_sabaeus
ENSBTAG00000018488AFF17781.643ENSCHOG00000000041AFF17881.188Choloepus_hoffmanni
ENSBTAG00000018488AFF15049.848ENSCHOG00000003138AFF46142.013Choloepus_hoffmanni
ENSBTAG00000018488AFF18358.108ENSCPBG00000007277AFF35858.108Chrysemys_picta_bellii
ENSBTAG00000018488AFF110057.907ENSCPBG00000005382AFF110057.622Chrysemys_picta_bellii
ENSBTAG00000018488AFF18742.322ENSCANG00000029116AFF26241.573Colobus_angolensis_palliatus
ENSBTAG00000018488AFF110079.433ENSCANG00000037514AFF110079.405Colobus_angolensis_palliatus
ENSBTAG00000018488AFF16858.108ENSCGRG00000003408Aff37458.667Cricetulus_griseus_crigri
ENSBTAG00000018488AFF17163.322ENSCGRG00000004837Aff18563.315Cricetulus_griseus_crigri
ENSBTAG00000018488AFF16461.194ENSCSEG00000017002aff46134.110Cynoglossus_semilaevis
ENSBTAG00000018488AFF18362.500ENSDARG00000001857aff46662.500Danio_rerio
ENSBTAG00000018488AFF17177.916ENSDNOG00000048783-10077.690Dasypus_novemcinctus
ENSBTAG00000018488AFF19973.590ENSDORG00000013881Aff15872.207Dipodomys_ordii
ENSBTAG00000018488AFF15849.206ENSETEG00000002756AFF25950.000Echinops_telfairi
ENSBTAG00000018488AFF19486.905ENSETEG00000014905AFF15868.194Echinops_telfairi
ENSBTAG00000018488AFF17536.330ENSEASG00005013954AFF25346.939Equus_asinus_asinus
ENSBTAG00000018488AFF110081.425ENSEASG00005012760AFF110080.624Equus_asinus_asinus
ENSBTAG00000018488AFF110081.025ENSECAG00000003619AFF110080.785Equus_caballus
ENSBTAG00000018488AFF18741.948ENSECAG00000021132AFF25054.795Equus_caballus
ENSBTAG00000018488AFF17492.500ENSEEUG00000013664-7492.500Erinaceus_europaeus
ENSBTAG00000018488AFF17341.948ENSEEUG00000015356AFF25842.991Erinaceus_europaeus
ENSBTAG00000018488AFF18264.062ENSELUG00000023871aff48664.062Esox_lucius
ENSBTAG00000018488AFF19947.836ENSFALG00000005554AFF15746.143Ficedula_albicollis
ENSBTAG00000018488AFF18157.971ENSFALG00000008916AFF48760.606Ficedula_albicollis
ENSBTAG00000018488AFF19966.639ENSFDAG00000018846AFF110065.885Fukomys_damarensis
ENSBTAG00000018488AFF16756.757ENSGMOG00000008803aff48339.130Gadus_morhua
ENSBTAG00000018488AFF18554.795ENSGALG00000009168AFF28637.136Gallus_gallus
ENSBTAG00000018488AFF110048.835ENSGALG00000043935AFF17157.143Gallus_gallus
ENSBTAG00000018488AFF17539.853ENSGALG00000030147AFF46233.981Gallus_gallus
ENSBTAG00000018488AFF18261.194ENSGACG00000020734aff48037.576Gasterosteus_aculeatus
ENSBTAG00000018488AFF19931.155ENSGACG00000016333-10036.118Gasterosteus_aculeatus
ENSBTAG00000018488AFF15731.479ENSGAGG00000024801-8930.888Gopherus_agassizii
ENSBTAG00000018488AFF18742.322ENSGGOG00000010543AFF25941.573Gorilla_gorilla
ENSBTAG00000018488AFF110080.113ENSGGOG00000008497AFF110080.081Gorilla_gorilla
ENSBTAG00000018488AFF17235.347ENSHBUG00000005828-6338.509Haplochromis_burtoni
ENSBTAG00000018488AFF19966.721ENSHGLG00000001384AFF110066.586Heterocephalus_glaber_female
ENSBTAG00000018488AFF19964.561ENSHGLG00100016607AFF15962.989Heterocephalus_glaber_male
ENSBTAG00000018488AFF17738.399ENSHCOG00000016280aff48037.678Hippocampus_comes
ENSBTAG00000018488AFF110079.612ENSSTOG00000006530AFF110079.469Ictidomys_tridecemlineatus
ENSBTAG00000018488AFF19969.317ENSJJAG00000022877Aff15968.213Jaculus_jaculus
ENSBTAG00000018488AFF16760.811ENSJJAG00000013155Aff37461.333Jaculus_jaculus
ENSBTAG00000018488AFF17640.167ENSJJAG00000000912Aff46034.973Jaculus_jaculus
ENSBTAG00000018488AFF17036.490ENSKMAG00000013113-5234.383Kryptolebias_marmoratus
ENSBTAG00000018488AFF18463.014ENSLBEG00000017778aff47262.121Labrus_bergylta
ENSBTAG00000018488AFF19949.079ENSLACG00000007303AFF19947.431Latimeria_chalumnae
ENSBTAG00000018488AFF17640.083ENSLACG00000008849AFF45933.425Latimeria_chalumnae
ENSBTAG00000018488AFF17740.541ENSLOCG00000004025AFF16337.414Lepisosteus_oculatus
ENSBTAG00000018488AFF18942.322ENSLAFG00000018691AFF28840.136Loxodonta_africana
ENSBTAG00000018488AFF16844.533ENSMFAG00000034615AFF45934.444Macaca_fascicularis
ENSBTAG00000018488AFF110080.500ENSMFAG00000037700AFF110080.258Macaca_fascicularis
ENSBTAG00000018488AFF18742.322ENSMFAG00000044807AFF26042.105Macaca_fascicularis
ENSBTAG00000018488AFF110079.660ENSMMUG00000014076AFF110079.741Macaca_mulatta
ENSBTAG00000018488AFF18742.322ENSMMUG00000000466AFF26042.105Macaca_mulatta
ENSBTAG00000018488AFF18742.322ENSMNEG00000035909AFF25942.105Macaca_nemestrina
ENSBTAG00000018488AFF110080.500ENSMNEG00000031536AFF110080.258Macaca_nemestrina
ENSBTAG00000018488AFF110080.500ENSMLEG00000039099AFF110080.258Mandrillus_leucophaeus
ENSBTAG00000018488AFF18742.322ENSMLEG00000038832AFF26142.105Mandrillus_leucophaeus
ENSBTAG00000018488AFF18463.889ENSMAMG00000021453aff49934.711Mastacembelus_armatus
ENSBTAG00000018488AFF17239.400ENSMAMG00000016189-7238.312Mastacembelus_armatus
ENSBTAG00000018488AFF17235.347ENSMZEG00005020442-6338.509Maylandia_zebra
ENSBTAG00000018488AFF19948.914ENSMGAG00000007646AFF15747.026Meleagris_gallopavo
ENSBTAG00000018488AFF17539.916ENSMGAG00000009144AFF46134.435Meleagris_gallopavo
ENSBTAG00000018488AFF15835.175ENSMGAG00000008246-9234.478Meleagris_gallopavo
ENSBTAG00000018488AFF17842.697ENSMAUG00000015604Aff25042.105Mesocricetus_auratus
ENSBTAG00000018488AFF17744.595ENSMAUG00000013669Aff47944.595Mesocricetus_auratus
ENSBTAG00000018488AFF19966.106ENSMAUG00000010241Aff15961.467Mesocricetus_auratus
ENSBTAG00000018488AFF19966.427ENSMOCG00000017389Aff16063.073Microtus_ochrogaster
ENSBTAG00000018488AFF15657.971ENSMMOG00000010019aff25357.971Mola_mola
ENSBTAG00000018488AFF18354.795ENSMODG00000005570AFF28834.820Monodelphis_domestica
ENSBTAG00000018488AFF19957.166ENSMODG00000020745AFF19756.437Monodelphis_domestica
ENSBTAG00000018488AFF15144.444ENSMODG00000027810-5652.500Monodelphis_domestica
ENSBTAG00000018488AFF17639.301MGP_CAROLIEiJ_G0016331Aff46057.534Mus_caroli
ENSBTAG00000018488AFF18436.154ENSMUSG00000037138Aff36656.962Mus_musculus
ENSBTAG00000018488AFF17639.407ENSMUSG00000049470Aff46057.534Mus_musculus
ENSBTAG00000018488AFF17639.451MGP_PahariEiJ_G0017466Aff46057.534Mus_pahari
ENSBTAG00000018488AFF17639.407MGP_SPRETEiJ_G0017175Aff46057.534Mus_spretus
ENSBTAG00000018488AFF110065.842MGP_SPRETEiJ_G0028466Aff18176.596Mus_spretus
ENSBTAG00000018488AFF110079.984ENSMPUG00000002270AFF110079.582Mustela_putorius_furo
ENSBTAG00000018488AFF19978.641ENSMLUG00000000293AFF110077.508Myotis_lucifugus
ENSBTAG00000018488AFF17033.942ENSNGAG00000002408Aff36658.228Nannospalax_galili
ENSBTAG00000018488AFF17640.042ENSNGAG00000019867Aff46034.699Nannospalax_galili
ENSBTAG00000018488AFF18742.322ENSNLEG00000013346AFF26041.573Nomascus_leucogenys
ENSBTAG00000018488AFF19976.284ENSNLEG00000009429AFF15975.732Nomascus_leucogenys
ENSBTAG00000018488AFF17733.267ENSMEUG00000014599AFF25731.191Notamacropus_eugenii
ENSBTAG00000018488AFF18951.226ENSMEUG00000003076-5552.000Notamacropus_eugenii
ENSBTAG00000018488AFF110071.233ENSOPRG00000017154-10071.475Ochotona_princeps
ENSBTAG00000018488AFF110058.273ENSOANG00000013624AFF110058.141Ornithorhynchus_anatinus
ENSBTAG00000018488AFF15343.071ENSOANG00000001095-6546.840Ornithorhynchus_anatinus
ENSBTAG00000018488AFF110075.525ENSOCUG00000002105AFF19775.040Oryctolagus_cuniculus
ENSBTAG00000018488AFF17736.858ENSORLG00000001361aff45933.199Oryzias_latipes
ENSBTAG00000018488AFF17736.858ENSORLG00020020601aff45933.199Oryzias_latipes_hni
ENSBTAG00000018488AFF17736.728ENSORLG00015004684aff45933.650Oryzias_latipes_hsok
ENSBTAG00000018488AFF17060.412ENSOGAG00000031211-8359.580Otolemur_garnettii
ENSBTAG00000018488AFF19996.639ENSOARG00000004522AFF110096.639Ovis_aries
ENSBTAG00000018488AFF110079.805ENSPPAG00000029196AFF110080.179Pan_paniscus
ENSBTAG00000018488AFF110078.352ENSPPRG00000023590AFF110078.514Panthera_pardus
ENSBTAG00000018488AFF15542.697ENSPTIG00000018890AFF26142.481Panthera_tigris_altaica
ENSBTAG00000018488AFF18679.098ENSPTIG00000011838AFF110082.463Panthera_tigris_altaica
ENSBTAG00000018488AFF16648.424ENSPTRG00000046486-9240.045Pan_troglodytes
ENSBTAG00000018488AFF18742.322ENSPTRG00000022353AFF25941.573Pan_troglodytes
ENSBTAG00000018488AFF110079.805ENSPTRG00000016255AFF110087.368Pan_troglodytes
ENSBTAG00000018488AFF16844.533ENSPANG00000007039AFF45934.444Papio_anubis
ENSBTAG00000018488AFF19876.277ENSPANG00000016722AFF15874.249Papio_anubis
ENSBTAG00000018488AFF18742.322ENSPANG00000002926AFF26341.573Papio_anubis
ENSBTAG00000018488AFF17737.705ENSPKIG00000024249AFF45833.471Paramormyrops_kingsleyae
ENSBTAG00000018488AFF18457.576ENSPKIG00000024325AFF46657.576Paramormyrops_kingsleyae
ENSBTAG00000018488AFF17740.393ENSPSIG00000013003AFF45833.981Pelodiscus_sinensis
ENSBTAG00000018488AFF110054.691ENSPSIG00000003759AFF15953.729Pelodiscus_sinensis
ENSBTAG00000018488AFF15834.011ENSPMGG00000006477aff49834.429Periophthalmus_magnuspinnatus
ENSBTAG00000018488AFF19479.032ENSPCIG00000011395AFF19979.032Phascolarctos_cinereus
ENSBTAG00000018488AFF15661.194ENSPFOG00000004581-5861.194Poecilia_formosa
ENSBTAG00000018488AFF15049.405ENSPLAG00000012910-5452.349Poecilia_latipinna
ENSBTAG00000018488AFF16357.143ENSPLAG00000005101aff27757.143Poecilia_latipinna
ENSBTAG00000018488AFF110077.561ENSPPYG00000014910AFF110077.642Pongo_abelii
ENSBTAG00000018488AFF17491.304ENSPCAG00000005658AFF17491.304Procavia_capensis
ENSBTAG00000018488AFF15555.000ENSPCAG00000015472AFF25355.000Procavia_capensis
ENSBTAG00000018488AFF18742.322ENSPCOG00000013963AFF26042.105Propithecus_coquereli
ENSBTAG00000018488AFF19582.490ENSPVAG00000014455AFF19681.818Pteropus_vampyrus
ENSBTAG00000018488AFF18436.557ENSRNOG00000018830Aff35146.642Rattus_norvegicus
ENSBTAG00000018488AFF110079.855ENSRBIG00000032242AFF110079.694Rhinopithecus_bieti
ENSBTAG00000018488AFF15542.322ENSRROG00000044189AFF26342.105Rhinopithecus_roxellana
ENSBTAG00000018488AFF110079.936ENSRROG00000045716AFF110079.774Rhinopithecus_roxellana
ENSBTAG00000018488AFF110077.643ENSSBOG00000035401AFF110078.468Saimiri_boliviensis_boliviensis
ENSBTAG00000018488AFF18742.697ENSSBOG00000020604AFF25941.948Saimiri_boliviensis_boliviensis
ENSBTAG00000018488AFF15831.579ENSSHAG00000009556AFF29931.332Sarcophilus_harrisii
ENSBTAG00000018488AFF17740.373ENSSHAG00000013198AFF46034.266Sarcophilus_harrisii
ENSBTAG00000018488AFF19957.649ENSSHAG00000004203AFF19957.510Sarcophilus_harrisii
ENSBTAG00000018488AFF15834.661ENSSFOG00015000846AFF48934.193Scleropages_formosus
ENSBTAG00000018488AFF18360.563ENSSFOG00015018646aff48660.274Scleropages_formosus
ENSBTAG00000018488AFF17835.721ENSSFOG00015004020aff29835.312Scleropages_formosus
ENSBTAG00000018488AFF17039.059ENSSMAG00000007062-9336.341Scophthalmus_maximus
ENSBTAG00000018488AFF18463.889ENSSMAG00000004734aff49063.889Scophthalmus_maximus
ENSBTAG00000018488AFF18463.889ENSSDUG00000019498aff48663.889Seriola_dumerili
ENSBTAG00000018488AFF15454.023ENSSARG00000013296-7753.448Sorex_araneus
ENSBTAG00000018488AFF17739.238ENSSPUG00000012215AFF46033.978Sphenodon_punctatus
ENSBTAG00000018488AFF19955.361ENSSPUG00000001574AFF15754.408Sphenodon_punctatus
ENSBTAG00000018488AFF15830.643ENSSPUG00000009604AFF39130.287Sphenodon_punctatus
ENSBTAG00000018488AFF16435.445ENSSPAG00000012370aff48833.973Stegastes_partitus
ENSBTAG00000018488AFF15881.793ENSSSCG00000023593AFF16182.098Sus_scrofa
ENSBTAG00000018488AFF19948.640ENSTGUG00000002726AFF110047.695Taeniopygia_guttata
ENSBTAG00000018488AFF18364.384ENSTRUG00000008087aff48564.384Takifugu_rubripes
ENSBTAG00000018488AFF18357.534ENSTNIG00000018201aff48138.469Tetraodon_nigroviridis
ENSBTAG00000018488AFF19976.082ENSTBEG00000007536AFF110075.673Tupaia_belangeri
ENSBTAG00000018488AFF110088.000ENSTTRG00000005595AFF110088.254Tursiops_truncatus
ENSBTAG00000018488AFF18180.157ENSUAMG00000001919AFF19979.961Ursus_americanus
ENSBTAG00000018488AFF19576.740ENSUMAG00000025433AFF18779.284Ursus_maritimus
ENSBTAG00000018488AFF18742.697ENSUMAG00000009395AFF25742.735Ursus_maritimus
ENSBTAG00000018488AFF110079.772ENSVPAG00000004007AFF15879.635Vicugna_pacos
ENSBTAG00000018488AFF110081.511ENSVVUG00000009263AFF110081.592Vulpes_vulpes
ENSBTAG00000018488AFF19943.795ENSXETG00000019955aff15941.655Xenopus_tropicalis
ENSBTAG00000018488AFF19931.333ENSXETG00000019630aff25343.019Xenopus_tropicalis
ENSBTAG00000018488AFF18260.811ENSXMAG00000001642aff48034.924Xiphophorus_maculatus
ENSBTAG00000018488AFF16457.143ENSXMAG00000015826aff25657.143Xiphophorus_maculatus

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