EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000018557 (Gene tree)
Gene ID: 519708
Gene Symbol: YTHDF3
Alias: -
Full Name: Bos taurus YTH N6-methyladenosine RNA binding protein 3 (YTHDF3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 63835 bases
Position: chr14:28141155-28204989
Accession: NM_001192513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000059596	YTH	PF04146.15	3.6e-40	1	1
ENSBTAP00000024699	YTH	PF04146.15	4.4e-40	1	1
ENSBTAP00000072690	YTH	PF04146.15	4.4e-40	1	1
ENSBTAP00000059232	YTH	PF04146.15	4.4e-40	1	1
ENSBTAP00000074259	YTH	PF04146.15	4.4e-40	1	1
ENSBTAP00000070643	YTH	PF04146.15	5.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000067356	-	2810	-	ENSBTAP00000059232	588 (aa)	XP_024857333	UPI00005BE1E4
ENSBTAT00000024699	-	5088	-	ENSBTAP00000024699	585 (aa)	-	E1BH80
ENSBTAT00000077633	-	2515	-	ENSBTAP00000070643	632 (aa)	-	UPI0005779772
ENSBTAT00000067603	-	2598	-	ENSBTAP00000059596	543 (aa)	-	-
ENSBTAT00000067009	-	3313	-	ENSBTAP00000074259	588 (aa)	XP_024857333	UPI00005BE1E4
ENSBTAT00000077735	-	2280	-	ENSBTAP00000072690	584 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000018557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000018557's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000018557	YTHDF3	99	67.172	ENSBTAG00000015771	YTHDF2	97	66.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000018557	YTHDF3	100	98.632	ENSG00000185728	YTHDF3	100	100.000	Homo_sapiens
ENSBTAG00000018557	YTHDF3	100	97.436	ENSAMEG00000018113	YTHDF3	100	97.436	Ailuropoda_melanoleuca
ENSBTAG00000018557	YTHDF3	99	69.416	ENSATEG00000011478	ythdf3	96	92.821	Anabas_testudineus
ENSBTAG00000018557	YTHDF3	98	93.520	ENSAPLG00000011329	YTHDF3	99	91.099	Anas_platyrhynchos
ENSBTAG00000018557	YTHDF3	100	92.137	ENSACAG00000016837	YTHDF3	100	91.453	Anolis_carolinensis
ENSBTAG00000018557	YTHDF3	100	98.462	ENSANAG00000037920	YTHDF3	100	98.462	Aotus_nancymaae
ENSBTAG00000018557	YTHDF3	98	81.784	ENSAMXG00000030366	ythdf3	97	76.871	Astyanax_mexicanus
ENSBTAG00000018557	YTHDF3	100	98.462	ENSCJAG00000009217	YTHDF3	100	98.462	Callithrix_jacchus
ENSBTAG00000018557	YTHDF3	100	98.129	ENSCAFG00000007215	YTHDF3	100	98.129	Canis_familiaris
ENSBTAG00000018557	YTHDF3	100	98.120	ENSCAFG00020015995	YTHDF3	100	98.127	Canis_lupus_dingo
ENSBTAG00000018557	YTHDF3	100	99.658	ENSCHIG00000026460	YTHDF3	100	99.658	Capra_hircus
ENSBTAG00000018557	YTHDF3	100	98.469	ENSTSYG00000009117	YTHDF3	100	98.469	Carlito_syrichta
ENSBTAG00000018557	YTHDF3	99	97.400	ENSCAPG00000014006	YTHDF3	100	97.400	Cavia_aperea
ENSBTAG00000018557	YTHDF3	100	98.120	ENSCPOG00000002961	YTHDF3	100	98.120	Cavia_porcellus
ENSBTAG00000018557	YTHDF3	100	98.291	ENSCCAG00000022316	YTHDF3	100	98.315	Cebus_capucinus
ENSBTAG00000018557	YTHDF3	100	98.632	ENSCATG00000038669	YTHDF3	100	98.632	Cercocebus_atys
ENSBTAG00000018557	YTHDF3	99	98.267	ENSCLAG00000002515	YTHDF3	100	98.267	Chinchilla_lanigera
ENSBTAG00000018557	YTHDF3	100	98.462	ENSCSAG00000014280	YTHDF3	100	98.462	Chlorocebus_sabaeus
ENSBTAG00000018557	YTHDF3	99	97.015	ENSCHOG00000010194	YTHDF3	97	97.331	Choloepus_hoffmanni
ENSBTAG00000018557	YTHDF3	100	92.150	ENSCPBG00000021405	YTHDF3	100	91.468	Chrysemys_picta_bellii
ENSBTAG00000018557	YTHDF3	100	98.632	ENSCANG00000032631	YTHDF3	100	98.632	Colobus_angolensis_palliatus
ENSBTAG00000018557	YTHDF3	100	97.959	ENSCGRG00001021204	Ythdf3	100	97.959	Cricetulus_griseus_chok1gshd
ENSBTAG00000018557	YTHDF3	73	67.848	ENSCGRG00000008289	-	64	73.504	Cricetulus_griseus_crigri
ENSBTAG00000018557	YTHDF3	100	97.449	ENSCGRG00000005613	-	100	97.449	Cricetulus_griseus_crigri
ENSBTAG00000018557	YTHDF3	100	79.770	ENSDARG00000057939	ythdf3	100	76.105	Danio_rerio
ENSBTAG00000018557	YTHDF3	100	96.944	ENSDNOG00000037156	YTHDF3	100	96.944	Dasypus_novemcinctus
ENSBTAG00000018557	YTHDF3	100	97.949	ENSDORG00000014699	Ythdf3	100	97.949	Dipodomys_ordii
ENSBTAG00000018557	YTHDF3	98	97.749	ENSETEG00000007144	YTHDF3	100	97.895	Echinops_telfairi
ENSBTAG00000018557	YTHDF3	100	98.462	ENSEASG00005016224	YTHDF3	100	98.462	Equus_asinus_asinus
ENSBTAG00000018557	YTHDF3	100	98.469	ENSECAG00000011093	YTHDF3	100	98.469	Equus_caballus
ENSBTAG00000018557	YTHDF3	100	98.129	ENSFCAG00000025314	YTHDF3	100	98.129	Felis_catus
ENSBTAG00000018557	YTHDF3	99	93.494	ENSFALG00000005503	YTHDF3	100	92.697	Ficedula_albicollis
ENSBTAG00000018557	YTHDF3	99	97.920	ENSFDAG00000002735	YTHDF3	100	97.920	Fukomys_damarensis
ENSBTAG00000018557	YTHDF3	100	75.162	ENSFHEG00000016395	ythdf3	99	74.194	Fundulus_heteroclitus
ENSBTAG00000018557	YTHDF3	100	93.675	ENSGALG00000039774	YTHDF3	100	92.991	Gallus_gallus
ENSBTAG00000018557	YTHDF3	100	91.980	ENSGAGG00000003851	YTHDF3	100	91.297	Gopherus_agassizii
ENSBTAG00000018557	YTHDF3	100	98.469	ENSGGOG00000027681	YTHDF3	100	98.689	Gorilla_gorilla
ENSBTAG00000018557	YTHDF3	100	97.949	ENSHGLG00000009954	YTHDF3	100	97.949	Heterocephalus_glaber_female
ENSBTAG00000018557	YTHDF3	99	97.920	ENSHGLG00100012403	YTHDF3	100	97.920	Heterocephalus_glaber_male
ENSBTAG00000018557	YTHDF3	100	79.967	ENSIPUG00000014157	YTHDF1	97	79.322	Ictalurus_punctatus
ENSBTAG00000018557	YTHDF3	100	97.959	ENSSTOG00000027792	YTHDF3	100	97.959	Ictidomys_tridecemlineatus
ENSBTAG00000018557	YTHDF3	99	98.094	ENSJJAG00000017742	Ythdf3	100	98.094	Jaculus_jaculus
ENSBTAG00000018557	YTHDF3	98	73.519	ENSKMAG00000008447	ythdf3	99	85.463	Kryptolebias_marmoratus
ENSBTAG00000018557	YTHDF3	99	84.686	ENSLACG00000002281	YTHDF3	100	83.139	Latimeria_chalumnae
ENSBTAG00000018557	YTHDF3	99	97.227	ENSLAFG00000016052	YTHDF3	100	95.805	Loxodonta_africana
ENSBTAG00000018557	YTHDF3	100	98.632	ENSMFAG00000043451	YTHDF3	100	98.689	Macaca_fascicularis
ENSBTAG00000018557	YTHDF3	100	98.632	ENSMMUG00000006729	YTHDF3	100	98.689	Macaca_mulatta
ENSBTAG00000018557	YTHDF3	100	98.632	ENSMNEG00000031200	YTHDF3	100	98.689	Macaca_nemestrina
ENSBTAG00000018557	YTHDF3	100	98.632	ENSMLEG00000036763	YTHDF3	100	98.632	Mandrillus_leucophaeus
ENSBTAG00000018557	YTHDF3	100	92.821	ENSMGAG00000011168	YTHDF3	100	92.137	Meleagris_gallopavo
ENSBTAG00000018557	YTHDF3	72	93.573	ENSMAUG00000012560	Ythdf3	99	93.041	Mesocricetus_auratus
ENSBTAG00000018557	YTHDF3	100	98.469	ENSMICG00000036869	-	100	98.469	Microcebus_murinus
ENSBTAG00000018557	YTHDF3	73	76.456	ENSMICG00000009379	-	100	75.696	Microcebus_murinus
ENSBTAG00000018557	YTHDF3	100	97.449	ENSMOCG00000011947	Ythdf3	100	97.449	Microtus_ochrogaster
ENSBTAG00000018557	YTHDF3	96	77.953	ENSMMOG00000003402	ythdf3	95	89.447	Mola_mola
ENSBTAG00000018557	YTHDF3	100	96.246	ENSMODG00000008255	YTHDF3	100	96.246	Monodelphis_domestica
ENSBTAG00000018557	YTHDF3	98	61.938	ENSMALG00000000147	ythdf3	94	91.837	Monopterus_albus
ENSBTAG00000018557	YTHDF3	100	98.129	MGP_CAROLIEiJ_G0024863	Ythdf3	100	98.129	Mus_caroli
ENSBTAG00000018557	YTHDF3	100	98.120	ENSMUSG00000047213	Ythdf3	100	98.120	Mus_musculus
ENSBTAG00000018557	YTHDF3	100	97.619	MGP_PahariEiJ_G0026310	Ythdf3	100	97.619	Mus_pahari
ENSBTAG00000018557	YTHDF3	100	98.120	MGP_SPRETEiJ_G0025794	Ythdf3	100	98.120	Mus_spretus
ENSBTAG00000018557	YTHDF3	100	98.462	ENSMPUG00000009857	YTHDF3	100	98.462	Mustela_putorius_furo
ENSBTAG00000018557	YTHDF3	99	97.762	ENSMLUG00000006541	YTHDF3	99	97.762	Myotis_lucifugus
ENSBTAG00000018557	YTHDF3	99	98.134	ENSNGAG00000018434	Ythdf3	96	98.134	Nannospalax_galili
ENSBTAG00000018557	YTHDF3	99	71.429	ENSNBRG00000023433	ythdf3	91	86.900	Neolamprologus_brichardi
ENSBTAG00000018557	YTHDF3	100	98.462	ENSNLEG00000003872	YTHDF3	100	98.462	Nomascus_leucogenys
ENSBTAG00000018557	YTHDF3	99	95.697	ENSMEUG00000011285	YTHDF3	100	95.697	Notamacropus_eugenii
ENSBTAG00000018557	YTHDF3	99	97.574	ENSODEG00000002033	YTHDF3	100	97.574	Octodon_degus
ENSBTAG00000018557	YTHDF3	99	92.427	ENSOANG00000005053	YTHDF3	100	90.706	Ornithorhynchus_anatinus
ENSBTAG00000018557	YTHDF3	99	98.519	ENSOCUG00000008723	YTHDF3	100	96.975	Oryctolagus_cuniculus
ENSBTAG00000018557	YTHDF3	99	76.158	ENSOMEG00000008212	ythdf3	99	75.643	Oryzias_melastigma
ENSBTAG00000018557	YTHDF3	99	97.774	ENSOGAG00000002302	YTHDF3	99	97.774	Otolemur_garnettii
ENSBTAG00000018557	YTHDF3	100	99.632	ENSOARG00000016882	YTHDF3	98	99.304	Ovis_aries
ENSBTAG00000018557	YTHDF3	100	98.291	ENSPPAG00000043483	YTHDF3	100	98.291	Pan_paniscus
ENSBTAG00000018557	YTHDF3	100	98.129	ENSPPRG00000004665	YTHDF3	100	98.129	Panthera_pardus
ENSBTAG00000018557	YTHDF3	100	98.129	ENSPTIG00000021537	YTHDF3	100	98.129	Panthera_tigris_altaica
ENSBTAG00000018557	YTHDF3	100	98.462	ENSPTRG00000049135	YTHDF3	100	98.462	Pan_troglodytes
ENSBTAG00000018557	YTHDF3	100	98.632	ENSPANG00000008030	YTHDF3	100	98.632	Papio_anubis
ENSBTAG00000018557	YTHDF3	96	80.668	ENSPKIG00000008298	ythdf3	96	80.995	Paramormyrops_kingsleyae
ENSBTAG00000018557	YTHDF3	100	94.027	ENSPSIG00000015861	YTHDF3	100	93.345	Pelodiscus_sinensis
ENSBTAG00000018557	YTHDF3	100	98.299	ENSPEMG00000020975	Ythdf3	100	98.299	Peromyscus_maniculatus_bairdii
ENSBTAG00000018557	YTHDF3	100	96.416	ENSPCIG00000017629	YTHDF3	100	96.416	Phascolarctos_cinereus
ENSBTAG00000018557	YTHDF3	91	98.936	ENSPPYG00000018626	YTHDF3	91	98.000	Pongo_abelii
ENSBTAG00000018557	YTHDF3	99	97.069	ENSPCAG00000016282	YTHDF3	100	97.069	Procavia_capensis
ENSBTAG00000018557	YTHDF3	100	98.469	ENSPCOG00000004856	YTHDF3	100	98.469	Propithecus_coquereli
ENSBTAG00000018557	YTHDF3	84	99.468	ENSPVAG00000002740	YTHDF3	86	99.468	Pteropus_vampyrus
ENSBTAG00000018557	YTHDF3	94	76.241	ENSPNYG00000002949	ythdf3	96	87.156	Pundamilia_nyererei
ENSBTAG00000018557	YTHDF3	100	97.949	ENSRNOG00000010084	Ythdf3	100	97.949	Rattus_norvegicus
ENSBTAG00000018557	YTHDF3	100	98.462	ENSRBIG00000036465	YTHDF3	100	98.462	Rhinopithecus_bieti
ENSBTAG00000018557	YTHDF3	100	98.291	ENSRROG00000035231	YTHDF3	100	98.291	Rhinopithecus_roxellana
ENSBTAG00000018557	YTHDF3	100	98.462	ENSSBOG00000035287	YTHDF3	100	98.462	Saimiri_boliviensis_boliviensis
ENSBTAG00000018557	YTHDF3	100	96.082	ENSSHAG00000009482	YTHDF3	100	96.082	Sarcophilus_harrisii
ENSBTAG00000018557	YTHDF3	87	90.351	ENSSFOG00015015445	ythdf3	99	75.131	Scleropages_formosus
ENSBTAG00000018557	YTHDF3	98	98.127	ENSSARG00000007626	YTHDF3	99	98.246	Sorex_araneus
ENSBTAG00000018557	YTHDF3	99	92.241	ENSSPUG00000009390	YTHDF3	98	91.549	Sphenodon_punctatus
ENSBTAG00000018557	YTHDF3	98	98.502	ENSSSCG00000033144	YTHDF3	100	98.502	Sus_scrofa
ENSBTAG00000018557	YTHDF3	99	93.657	ENSTGUG00000011243	YTHDF3	98	92.870	Taeniopygia_guttata
ENSBTAG00000018557	YTHDF3	80	97.393	ENSTBEG00000005747	YTHDF3	81	97.393	Tupaia_belangeri
ENSBTAG00000018557	YTHDF3	99	89.655	ENSTTRG00000014564	YTHDF3	98	89.085	Tursiops_truncatus
ENSBTAG00000018557	YTHDF3	100	98.299	ENSUAMG00000012624	YTHDF3	100	98.299	Ursus_americanus
ENSBTAG00000018557	YTHDF3	100	98.299	ENSUMAG00000014104	YTHDF3	100	98.299	Ursus_maritimus
ENSBTAG00000018557	YTHDF3	99	85.289	ENSVPAG00000008104	YTHDF3	97	85.080	Vicugna_pacos
ENSBTAG00000018557	YTHDF3	100	98.129	ENSVVUG00000018384	YTHDF3	100	98.129	Vulpes_vulpes
ENSBTAG00000018557	YTHDF3	100	88.718	ENSXETG00000021659	ythdf3	100	88.547	Xenopus_tropicalis
ENSBTAG00000018557	YTHDF3	99	75.377	ENSXCOG00000009687	ythdf3	99	76.289	Xiphophorus_couchianus
ENSBTAG00000018557	YTHDF3	100	75.851	ENSXMAG00000009698	ythdf3	99	76.632	Xiphophorus_maculatus