EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSBTAG00000018622 (Gene tree)
Gene ID
506889
Gene Symbol
PCBP4
Alias
-
Full Name
Bos taurus poly(rC) binding protein 4 (PCBP4)%2C mRNA.
Gene Type
protein_coding
Species
Bos_taurus
Status
putative
Strand
Plus strand
Length
10046 bases
Position
chr22:48966805-48976850
Accession
NM_001075283
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSBTAP00000024779KH_1PF00013.292.4e-5013
ENSBTAP00000024779KH_1PF00013.292.4e-5023
ENSBTAP00000024779KH_1PF00013.292.4e-5033
ENSBTAP00000070359KH_1PF00013.291.3e-4613
ENSBTAP00000070359KH_1PF00013.291.3e-4623
ENSBTAP00000070359KH_1PF00013.291.3e-4633
ENSBTAP00000074187KH_1PF00013.291.6e-3812
ENSBTAP00000074187KH_1PF00013.291.6e-3822
ENSBTAP00000024779KH_2PF07650.178.4e-1511
ENSBTAP00000070359KH_2PF07650.172.9e-1211
ENSBTAP00000074187KH_2PF07650.175.4e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSBTAT00000024779-2056-ENSBTAP00000024779403 (aa)XP_010815992Q0VCU0
ENSBTAT00000078241-1030-ENSBTAP00000070359321 (aa)--
ENSBTAT00000087500-1212-ENSBTAP00000074187403 (aa)--
Gene Model
Click here to download ENSBTAG00000018622's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000018622's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSBTAG00000018622PCBP46848.276ENSBTAG00000021131HNRNPK5948.276
ENSBTAG00000018622PCBP49260.714ENSBTAG00000030775PCBP39556.560
ENSBTAG00000018622PCBP47332.800ENSBTAG00000011736IGF2BP15930.597
ENSBTAG00000018622PCBP48550.617ENSBTAG00000008985PCBP19852.778
ENSBTAG00000018622PCBP49241.270ENSBTAG00000013072FUBP36536.000
ENSBTAG00000018622PCBP49753.012ENSBTAG00000020757PCBP29659.748
ENSBTAG00000018622PCBP49235.616ENSBTAG00000021018KHSRP5734.091
ENSBTAG00000018622PCBP48930.833ENSBTAG00000007666IGF2BP26432.800
ENSBTAG00000018622PCBP49937.500ENSBTAG00000008926FUBP16034.524
ENSBTAG00000018622PCBP48539.560ENSBTAG00000002170NOVA17039.560
ENSBTAG00000018622PCBP47941.538ENSBTAG00000013157NOVA25541.538
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSBTAG00000018622PCBP410097.519ENSG00000090097PCBP410099.405Homo_sapiens
ENSBTAG00000018622PCBP49758.998ENSAPOG00000009897-9558.124Acanthochromis_polyacanthus
ENSBTAG00000018622PCBP410099.007ENSAMEG00000009211PCBP410099.007Ailuropoda_melanoleuca
ENSBTAG00000018622PCBP48954.009ENSACIG00000015264pcbp49451.316Amphilophus_citrinellus
ENSBTAG00000018622PCBP49157.554ENSACIG00000020434-10056.627Amphilophus_citrinellus
ENSBTAG00000018622PCBP49659.605ENSAOCG00000006924-9956.780Amphiprion_ocellaris
ENSBTAG00000018622PCBP49754.897ENSAOCG00000021366-9754.233Amphiprion_ocellaris
ENSBTAG00000018622PCBP49047.867ENSAPEG00000009555-9246.528Amphiprion_percula
ENSBTAG00000018622PCBP49659.831ENSAPEG00000023157pcbp410057.022Amphiprion_percula
ENSBTAG00000018622PCBP49755.606ENSATEG00000006511-9754.897Anabas_testudineus
ENSBTAG00000018622PCBP48262.593ENSATEG00000008529pcbp49354.872Anabas_testudineus
ENSBTAG00000018622PCBP410079.808ENSACAG00000011701PCBP410079.327Anolis_carolinensis
ENSBTAG00000018622PCBP410097.767ENSANAG00000023072PCBP410097.767Aotus_nancymaae
ENSBTAG00000018622PCBP49758.581ENSACLG00000025246-9558.124Astatotilapia_calliptera
ENSBTAG00000018622PCBP49754.989ENSACLG00000013348pcbp49453.291Astatotilapia_calliptera
ENSBTAG00000018622PCBP49758.969ENSAMXG00000033125pcbp49558.296Astyanax_mexicanus
ENSBTAG00000018622PCBP410097.767ENSCJAG00000005783PCBP410097.767Callithrix_jacchus
ENSBTAG00000018622PCBP410099.007ENSCAFG00000010019PCBP410099.007Canis_familiaris
ENSBTAG00000018622PCBP410099.007ENSCAFG00020022361PCBP410099.007Canis_lupus_dingo
ENSBTAG00000018622PCBP410099.752ENSCHIG00000012918PCBP410099.752Capra_hircus
ENSBTAG00000018622PCBP410098.759ENSTSYG00000008765PCBP410098.759Carlito_syrichta
ENSBTAG00000018622PCBP410097.022ENSCAPG00000005895PCBP410097.022Cavia_aperea
ENSBTAG00000018622PCBP410097.767ENSCPOG00000014617PCBP410097.767Cavia_porcellus
ENSBTAG00000018622PCBP410098.015ENSCCAG00000033268PCBP410098.015Cebus_capucinus
ENSBTAG00000018622PCBP410098.015ENSCATG00000032034PCBP410098.015Cercocebus_atys
ENSBTAG00000018622PCBP410097.767ENSCLAG00000008356PCBP410097.767Chinchilla_lanigera
ENSBTAG00000018622PCBP410098.015ENSCSAG00000013913PCBP410098.015Chlorocebus_sabaeus
ENSBTAG00000018622PCBP410080.769ENSCPBG00000016554PCBP49780.288Chrysemys_picta_bellii
ENSBTAG00000018622PCBP410098.015ENSCANG00000038865PCBP410098.015Colobus_angolensis_palliatus
ENSBTAG00000018622PCBP410098.263ENSCGRG00001014953Pcbp410098.263Cricetulus_griseus_chok1gshd
ENSBTAG00000018622PCBP410098.263ENSCGRG00000008617Pcbp410098.263Cricetulus_griseus_crigri
ENSBTAG00000018622PCBP49652.790ENSCSEG00000014487pcbp49352.146Cynoglossus_semilaevis
ENSBTAG00000018622PCBP49754.091ENSCSEG00000021041PCBP49753.075Cynoglossus_semilaevis
ENSBTAG00000018622PCBP49660.000ENSCVAG00000003674pcbp49859.437Cyprinodon_variegatus
ENSBTAG00000018622PCBP49758.770ENSCVAG00000013090-9557.895Cyprinodon_variegatus
ENSBTAG00000018622PCBP49757.753ENSDARG00000024276pcbp49963.975Danio_rerio
ENSBTAG00000018622PCBP496100.000ENSDNOG00000033951PCBP490100.000Dasypus_novemcinctus
ENSBTAG00000018622PCBP410097.270ENSDORG00000000573Pcbp410097.270Dipodomys_ordii
ENSBTAG00000018622PCBP48289.085ENSETEG00000001778PCBP49987.458Echinops_telfairi
ENSBTAG00000018622PCBP410098.015ENSEASG00005012889PCBP410098.015Equus_asinus_asinus
ENSBTAG00000018622PCBP410098.015ENSECAG00000024218PCBP410098.015Equus_caballus
ENSBTAG00000018622PCBP49757.111ENSELUG00000018204pcbp49557.778Esox_lucius
ENSBTAG00000018622PCBP49756.823ENSELUG00000001870-9555.955Esox_lucius
ENSBTAG00000018622PCBP410099.256ENSFCAG00000009148PCBP410099.256Felis_catus
ENSBTAG00000018622PCBP49678.304ENSFALG00000008831PCBP48980.645Ficedula_albicollis
ENSBTAG00000018622PCBP410097.519ENSFDAG00000012692PCBP410097.619Fukomys_damarensis
ENSBTAG00000018622PCBP49248.855ENSFHEG00000002769-10048.346Fundulus_heteroclitus
ENSBTAG00000018622PCBP49857.883ENSGMOG00000017799-9857.014Gadus_morhua
ENSBTAG00000018622PCBP49877.641ENSGALG00000027695PCBP49877.150Gallus_gallus
ENSBTAG00000018622PCBP48961.491ENSGAFG00000021090-7860.383Gambusia_affinis
ENSBTAG00000018622PCBP49860.911ENSGACG00000002664-9760.432Gasterosteus_aculeatus
ENSBTAG00000018622PCBP410080.288ENSGAGG00000022116PCBP49779.808Gopherus_agassizii
ENSBTAG00000018622PCBP410097.270ENSGGOG00000012474PCBP410097.270Gorilla_gorilla
ENSBTAG00000018622PCBP48966.000ENSHBUG00000009472pcbp49355.928Haplochromis_burtoni
ENSBTAG00000018622PCBP49758.998ENSHBUG00000005329-9558.124Haplochromis_burtoni
ENSBTAG00000018622PCBP410098.263ENSHGLG00000012018PCBP410098.263Heterocephalus_glaber_female
ENSBTAG00000018622PCBP410096.059ENSHGLG00100008748PCBP410096.059Heterocephalus_glaber_male
ENSBTAG00000018622PCBP49758.738ENSHCOG00000010838-10055.138Hippocampus_comes
ENSBTAG00000018622PCBP49762.260ENSIPUG00000008212pcbp49562.260Ictalurus_punctatus
ENSBTAG00000018622PCBP410096.278ENSSTOG00000002573PCBP410096.278Ictidomys_tridecemlineatus
ENSBTAG00000018622PCBP410098.263ENSJJAG00000016235Pcbp410098.263Jaculus_jaculus
ENSBTAG00000018622PCBP49758.124ENSKMAG00000017554-9661.017Kryptolebias_marmoratus
ENSBTAG00000018622PCBP49660.331ENSKMAG00000014252pcbp49960.108Kryptolebias_marmoratus
ENSBTAG00000018622PCBP49759.268ENSLBEG00000011345-9558.810Labrus_bergylta
ENSBTAG00000018622PCBP410066.587ENSLACG00000015899PCBP49477.500Latimeria_chalumnae
ENSBTAG00000018622PCBP49758.756ENSLOCG00000013402pcbp49559.584Lepisosteus_oculatus
ENSBTAG00000018622PCBP49698.045ENSLAFG00000010732PCBP410098.045Loxodonta_africana
ENSBTAG00000018622PCBP410098.015ENSMFAG00000001431PCBP410098.015Macaca_fascicularis
ENSBTAG00000018622PCBP410098.015ENSMMUG00000022205PCBP410098.015Macaca_mulatta
ENSBTAG00000018622PCBP410098.015ENSMNEG00000028553PCBP410098.015Macaca_nemestrina
ENSBTAG00000018622PCBP410098.015ENSMLEG00000027083PCBP410098.015Mandrillus_leucophaeus
ENSBTAG00000018622PCBP49758.998ENSMAMG00000011364-9558.124Mastacembelus_armatus
ENSBTAG00000018622PCBP49857.718ENSMAMG00000010163pcbp49356.823Mastacembelus_armatus
ENSBTAG00000018622PCBP48966.000ENSMZEG00005008852pcbp49355.928Maylandia_zebra
ENSBTAG00000018622PCBP49758.581ENSMZEG00005023631-9558.124Maylandia_zebra
ENSBTAG00000018622PCBP46868.137ENSMGAG00000003895-9967.157Meleagris_gallopavo
ENSBTAG00000018622PCBP46380.569ENSMGAG00000005091-9584.615Meleagris_gallopavo
ENSBTAG00000018622PCBP410097.270ENSMAUG00000021064Pcbp410097.270Mesocricetus_auratus
ENSBTAG00000018622PCBP410098.759ENSMICG00000002686PCBP410098.759Microcebus_murinus
ENSBTAG00000018622PCBP410097.519ENSMOCG00000013557Pcbp410097.519Microtus_ochrogaster
ENSBTAG00000018622PCBP49755.023ENSMMOG00000020533-9854.795Mola_mola
ENSBTAG00000018622PCBP48855.446ENSMMOG00000017756pcbp49855.446Mola_mola
ENSBTAG00000018622PCBP410091.220ENSMODG00000011790PCBP48591.220Monodelphis_domestica
ENSBTAG00000018622PCBP48966.333ENSMALG00000020318pcbp48463.061Monopterus_albus
ENSBTAG00000018622PCBP48756.030ENSMALG00000022117-9955.303Monopterus_albus
ENSBTAG00000018622PCBP410098.015MGP_CAROLIEiJ_G0032623Pcbp410098.214Mus_caroli
ENSBTAG00000018622PCBP410098.015ENSMUSG00000023495Pcbp410098.649Mus_musculus
ENSBTAG00000018622PCBP410098.263MGP_PahariEiJ_G0015491Pcbp410098.477Mus_pahari
ENSBTAG00000018622PCBP410098.015MGP_SPRETEiJ_G0033768-10098.214Mus_spretus
ENSBTAG00000018622PCBP410099.256ENSMPUG00000011766PCBP410099.256Mustela_putorius_furo
ENSBTAG00000018622PCBP410098.015ENSNGAG00000013148Pcbp410098.015Nannospalax_galili
ENSBTAG00000018622PCBP49548.980ENSNBRG00000007475pcbp49848.526Neolamprologus_brichardi
ENSBTAG00000018622PCBP49754.691ENSNBRG00000015885-9754.462Neolamprologus_brichardi
ENSBTAG00000018622PCBP410098.015ENSNLEG00000007064PCBP410098.015Nomascus_leucogenys
ENSBTAG00000018622PCBP49077.206ENSMEUG00000006917PCBP49777.206Notamacropus_eugenii
ENSBTAG00000018622PCBP49088.250ENSOPRG00000008763PCBP49988.250Ochotona_princeps
ENSBTAG00000018622PCBP410097.767ENSODEG00000018230PCBP410097.767Octodon_degus
ENSBTAG00000018622PCBP410087.775ENSOANG00000014110PCBP49787.775Ornithorhynchus_anatinus
ENSBTAG00000018622PCBP410098.015ENSOCUG00000025336PCBP410098.015Oryctolagus_cuniculus
ENSBTAG00000018622PCBP49753.145ENSORLG00000003061pcbp49453.043Oryzias_latipes
ENSBTAG00000018622PCBP49755.455ENSORLG00000009899-9854.795Oryzias_latipes
ENSBTAG00000018622PCBP49758.998ENSORLG00020001183-9558.124Oryzias_latipes_hni
ENSBTAG00000018622PCBP48961.356ENSORLG00015019262pcbp49453.004Oryzias_latipes_hsok
ENSBTAG00000018622PCBP49758.770ENSORLG00015017819-9557.895Oryzias_latipes_hsok
ENSBTAG00000018622PCBP49758.542ENSOMEG00000011545-9558.124Oryzias_melastigma
ENSBTAG00000018622PCBP49756.582ENSOMEG00000003516-9356.120Oryzias_melastigma
ENSBTAG00000018622PCBP410098.511ENSOGAG00000032384PCBP410098.511Otolemur_garnettii
ENSBTAG00000018622PCBP49699.454ENSOARG00000006603PCBP410099.454Ovis_aries
ENSBTAG00000018622PCBP410097.767ENSPPAG00000038764PCBP410097.767Pan_paniscus
ENSBTAG00000018622PCBP410099.256ENSPPRG00000006165PCBP410099.256Panthera_pardus
ENSBTAG00000018622PCBP49999.252ENSPTIG00000005401PCBP49599.252Panthera_tigris_altaica
ENSBTAG00000018622PCBP410097.519ENSPTRG00000014983PCBP410097.519Pan_troglodytes
ENSBTAG00000018622PCBP410098.015ENSPANG00000026222PCBP410098.015Papio_anubis
ENSBTAG00000018622PCBP49758.028ENSPKIG00000010244pcbp410054.442Paramormyrops_kingsleyae
ENSBTAG00000018622PCBP49959.594ENSPKIG00000005487-9758.597Paramormyrops_kingsleyae
ENSBTAG00000018622PCBP49370.662ENSPSIG00000011286PCBP49771.633Pelodiscus_sinensis
ENSBTAG00000018622PCBP49755.069ENSPMGG00000022732-9854.965Periophthalmus_magnuspinnatus
ENSBTAG00000018622PCBP49255.024ENSPMGG00000000063pcbp49954.306Periophthalmus_magnuspinnatus
ENSBTAG00000018622PCBP410098.015ENSPEMG00000009276Pcbp410098.015Peromyscus_maniculatus_bairdii
ENSBTAG00000018622PCBP410091.463ENSPCIG00000018151PCBP49691.463Phascolarctos_cinereus
ENSBTAG00000018622PCBP49758.581ENSPFOG00000002989-9558.124Poecilia_formosa
ENSBTAG00000018622PCBP49755.581ENSPFOG00000014474pcbp49859.639Poecilia_formosa
ENSBTAG00000018622PCBP47952.507ENSPLAG00000023316pcbp48951.715Poecilia_latipinna
ENSBTAG00000018622PCBP49147.209ENSPLAG00000011438-9946.977Poecilia_latipinna
ENSBTAG00000018622PCBP48141.554ENSPMEG00000012990pcbp410040.541Poecilia_mexicana
ENSBTAG00000018622PCBP48453.137ENSPREG00000021498-8353.137Poecilia_reticulata
ENSBTAG00000018622PCBP49752.436ENSPREG00000017370-9752.204Poecilia_reticulata
ENSBTAG00000018622PCBP410097.767ENSPPYG00000013822PCBP410097.767Pongo_abelii
ENSBTAG00000018622PCBP49189.646ENSPCAG00000009515PCBP49989.646Procavia_capensis
ENSBTAG00000018622PCBP410098.759ENSPCOG00000027535PCBP410098.759Propithecus_coquereli
ENSBTAG00000018622PCBP49185.337ENSPVAG00000012474PCBP49985.337Pteropus_vampyrus
ENSBTAG00000018622PCBP49754.897ENSPNYG00000003098-9754.233Pundamilia_nyererei
ENSBTAG00000018622PCBP49352.252ENSPNYG00000019234pcbp410051.577Pundamilia_nyererei
ENSBTAG00000018622PCBP49758.427ENSPNAG00000025434pcbp49557.753Pygocentrus_nattereri
ENSBTAG00000018622PCBP410098.263ENSRNOG00000012406Pcbp410098.263Rattus_norvegicus
ENSBTAG00000018622PCBP410098.015ENSRBIG00000043793PCBP410098.015Rhinopithecus_bieti
ENSBTAG00000018622PCBP410098.015ENSRROG00000034589PCBP410098.015Rhinopithecus_roxellana
ENSBTAG00000018622PCBP410098.015ENSSBOG00000027029PCBP410098.015Saimiri_boliviensis_boliviensis
ENSBTAG00000018622PCBP48892.275ENSSHAG00000007362PCBP410092.275Sarcophilus_harrisii
ENSBTAG00000018622PCBP47156.471ENSSFOG00015008221pcbp46353.517Scleropages_formosus
ENSBTAG00000018622PCBP49759.353ENSSFOG00015012075PCBP49959.028Scleropages_formosus
ENSBTAG00000018622PCBP49758.124ENSSMAG00000009392-9457.437Scophthalmus_maximus
ENSBTAG00000018622PCBP49657.772ENSSMAG00000005827pcbp49057.254Scophthalmus_maximus
ENSBTAG00000018622PCBP49054.676ENSSDUG00000017719pcbp49852.983Seriola_dumerili
ENSBTAG00000018622PCBP49754.897ENSSDUG00000015540-9754.233Seriola_dumerili
ENSBTAG00000018622PCBP45668.715ENSSLDG00000024847-7575.000Seriola_lalandi_dorsalis
ENSBTAG00000018622PCBP49754.897ENSSLDG00000007851-9754.233Seriola_lalandi_dorsalis
ENSBTAG00000018622PCBP410074.279ENSSPUG00000000194PCBP410073.798Sphenodon_punctatus
ENSBTAG00000018622PCBP48051.070ENSSPAG00000019058-9248.396Stegastes_partitus
ENSBTAG00000018622PCBP49759.039ENSSPAG00000003033-9558.581Stegastes_partitus
ENSBTAG00000018622PCBP410099.256ENSSSCG00000028446PCBP410099.256Sus_scrofa
ENSBTAG00000018622PCBP49168.730ENSTGUG00000006393PCBP49970.000Taeniopygia_guttata
ENSBTAG00000018622PCBP49754.442ENSTRUG00000007426-9753.776Takifugu_rubripes
ENSBTAG00000018622PCBP49762.562ENSTNIG00000017887-9762.315Tetraodon_nigroviridis
ENSBTAG00000018622PCBP47970.195ENSTBEG00000015770PCBP410070.195Tupaia_belangeri
ENSBTAG00000018622PCBP47599.412ENSTTRG00000001443PCBP48499.412Tursiops_truncatus
ENSBTAG00000018622PCBP49698.773ENSUAMG00000020871PCBP410098.773Ursus_americanus
ENSBTAG00000018622PCBP49598.425ENSUMAG00000021609PCBP49498.425Ursus_maritimus
ENSBTAG00000018622PCBP410099.007ENSVVUG00000026857PCBP410099.007Vulpes_vulpes
ENSBTAG00000018622PCBP49655.102ENSXCOG00000000111-9460.444Xiphophorus_couchianus
ENSBTAG00000018622PCBP48449.015ENSXMAG00000022188-9047.783Xiphophorus_maculatus
ENSBTAG00000018622PCBP48961.920ENSXMAG00000015709pcbp47662.810Xiphophorus_maculatus
ENSBTAG00000018622PCBP49758.314ENSXMAG00000024530-9557.859Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003677DNA binding-IEAFunction
GO:0003730mRNA 3'-UTR binding-IEAFunction
GO:0005829cytosol-IEAComponent
GO:0043488regulation of mRNA stability-IEAProcess

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