EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000018849 (Gene tree)
Gene ID: 539888
Gene Symbol: AICDA
Alias: -
Full Name: activation induced cytidine deaminase
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 10372 bases
Position: chr5:101224468-101234839
Accession: 25757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000025096	APOBEC_N	PF08210.11	3.5e-63	1	1
ENSBTAP00000025096	APOBEC_C	PF05240.14	1.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000025096	-	1342	-	ENSBTAP00000025096	199 (aa)	-	F1MV53

Gene Model

Click here to download ENSBTAG00000018849's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta04672	Intestinal immune network for IgA production	KEGG
bta05340	Primary immunodeficiency	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000018849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000018849	AICDA	88	40.217	ENSBTAG00000037800	-	97	40.217
ENSBTAG00000018849	AICDA	89	40.571	ENSBTAG00000007755	APOBEC3H	90	40.571
ENSBTAG00000018849	AICDA	86	35.955	ENSBTAG00000005974	APOBEC2	55	35.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000018849	AICDA	100	94.472	ENSG00000111732	AICDA	100	94.472	Homo_sapiens
ENSBTAG00000018849	AICDA	99	57.212	ENSAPOG00000023552	aicda	98	60.000	Acanthochromis_polyacanthus
ENSBTAG00000018849	AICDA	99	95.431	ENSAMEG00000007082	AICDA	99	95.431	Ailuropoda_melanoleuca
ENSBTAG00000018849	AICDA	98	60.914	ENSACIG00000012301	aicda	100	60.914	Amphilophus_citrinellus
ENSBTAG00000018849	AICDA	100	58.794	ENSAOCG00000000482	aicda	100	58.794	Amphiprion_ocellaris
ENSBTAG00000018849	AICDA	100	58.794	ENSAPEG00000009755	aicda	100	58.794	Amphiprion_percula
ENSBTAG00000018849	AICDA	99	61.111	ENSATEG00000022035	aicda	97	61.111	Anabas_testudineus
ENSBTAG00000018849	AICDA	99	87.817	ENSAPLG00000013954	AICDA	98	87.817	Anas_platyrhynchos
ENSBTAG00000018849	AICDA	100	85.930	ENSACAG00000017441	AICDA	99	85.930	Anolis_carolinensis
ENSBTAG00000018849	AICDA	100	94.472	ENSANAG00000022438	AICDA	100	94.472	Aotus_nancymaae
ENSBTAG00000018849	AICDA	98	60.914	ENSACLG00000022679	aicda	100	60.914	Astatotilapia_calliptera
ENSBTAG00000018849	AICDA	71	59.603	ENSAMXG00000037242	aicda	63	59.603	Astyanax_mexicanus
ENSBTAG00000018849	AICDA	100	94.472	ENSCJAG00000018856	AICDA	100	94.472	Callithrix_jacchus
ENSBTAG00000018849	AICDA	100	94.975	ENSCAFG00000013897	AICDA	85	94.975	Canis_familiaris
ENSBTAG00000018849	AICDA	100	93.970	ENSCAFG00020003515	AICDA	97	93.970	Canis_lupus_dingo
ENSBTAG00000018849	AICDA	100	97.487	ENSCHIG00000012409	AICDA	100	97.487	Capra_hircus
ENSBTAG00000018849	AICDA	100	91.457	ENSTSYG00000011304	AICDA	100	91.457	Carlito_syrichta
ENSBTAG00000018849	AICDA	91	92.857	ENSCPOG00000037838	-	100	92.857	Cavia_porcellus
ENSBTAG00000018849	AICDA	97	92.268	ENSCPOG00000039255	-	100	92.268	Cavia_porcellus
ENSBTAG00000018849	AICDA	97	93.814	ENSCPOG00000030440	-	100	93.814	Cavia_porcellus
ENSBTAG00000018849	AICDA	100	75.377	ENSCCAG00000030398	AICDA	100	75.377	Cebus_capucinus
ENSBTAG00000018849	AICDA	100	94.472	ENSCATG00000039986	AICDA	100	94.472	Cercocebus_atys
ENSBTAG00000018849	AICDA	99	94.416	ENSCSAG00000009663	AICDA	100	94.416	Chlorocebus_sabaeus
ENSBTAG00000018849	AICDA	100	72.362	ENSCHOG00000010248	AICDA	100	72.362	Choloepus_hoffmanni
ENSBTAG00000018849	AICDA	99	88.325	ENSCPBG00000014337	AICDA	98	88.325	Chrysemys_picta_bellii
ENSBTAG00000018849	AICDA	100	94.472	ENSCANG00000035131	AICDA	100	94.472	Colobus_angolensis_palliatus
ENSBTAG00000018849	AICDA	100	92.965	ENSCGRG00001009654	Aicda	100	92.965	Cricetulus_griseus_chok1gshd
ENSBTAG00000018849	AICDA	100	92.965	ENSCGRG00000013829	Aicda	100	92.965	Cricetulus_griseus_crigri
ENSBTAG00000018849	AICDA	100	58.095	ENSCSEG00000018589	aicda	98	58.095	Cynoglossus_semilaevis
ENSBTAG00000018849	AICDA	99	61.000	ENSCVAG00000001218	aicda	99	61.000	Cyprinodon_variegatus
ENSBTAG00000018849	AICDA	100	62.802	ENSDARG00000015734	aicda	98	62.802	Danio_rerio
ENSBTAG00000018849	AICDA	90	90.556	ENSETEG00000014702	AICDA	99	90.556	Echinops_telfairi
ENSBTAG00000018849	AICDA	100	93.970	ENSEASG00005015947	AICDA	100	93.970	Equus_asinus_asinus
ENSBTAG00000018849	AICDA	100	95.477	ENSECAG00000018578	AICDA	100	95.477	Equus_caballus
ENSBTAG00000018849	AICDA	90	91.111	ENSEEUG00000013899	AICDA	99	91.111	Erinaceus_europaeus
ENSBTAG00000018849	AICDA	99	59.330	ENSELUG00000016293	aicda	98	59.330	Esox_lucius
ENSBTAG00000018849	AICDA	100	95.477	ENSFCAG00000006052	AICDA	85	95.477	Felis_catus
ENSBTAG00000018849	AICDA	99	80.711	ENSFALG00000007261	AICDA	100	80.711	Ficedula_albicollis
ENSBTAG00000018849	AICDA	91	84.615	ENSFDAG00000011141	AICDA	100	84.615	Fukomys_damarensis
ENSBTAG00000018849	AICDA	98	57.767	ENSFHEG00000015733	aicda	99	57.767	Fundulus_heteroclitus
ENSBTAG00000018849	AICDA	100	59.048	ENSGMOG00000004114	aicda	98	59.048	Gadus_morhua
ENSBTAG00000018849	AICDA	100	87.437	ENSGALG00000014280	AICDA	100	87.437	Gallus_gallus
ENSBTAG00000018849	AICDA	98	55.556	ENSGAFG00000013758	aicda	95	55.556	Gambusia_affinis
ENSBTAG00000018849	AICDA	100	56.190	ENSGACG00000010521	aicda	98	56.190	Gasterosteus_aculeatus
ENSBTAG00000018849	AICDA	100	87.437	ENSGAGG00000011839	-	100	87.437	Gopherus_agassizii
ENSBTAG00000018849	AICDA	99	87.310	ENSGAGG00000011838	-	98	87.310	Gopherus_agassizii
ENSBTAG00000018849	AICDA	99	94.416	ENSGGOG00000003338	AICDA	98	94.416	Gorilla_gorilla
ENSBTAG00000018849	AICDA	98	60.914	ENSHBUG00000014333	aicda	100	60.914	Haplochromis_burtoni
ENSBTAG00000018849	AICDA	99	95.431	ENSHGLG00000001443	AICDA	98	95.431	Heterocephalus_glaber_female
ENSBTAG00000018849	AICDA	100	94.975	ENSHGLG00100001381	AICDA	100	94.975	Heterocephalus_glaber_male
ENSBTAG00000018849	AICDA	95	60.938	ENSHCOG00000018886	aicda	97	60.938	Hippocampus_comes
ENSBTAG00000018849	AICDA	100	58.373	ENSIPUG00000007380	aicda	99	58.373	Ictalurus_punctatus
ENSBTAG00000018849	AICDA	100	92.965	ENSSTOG00000010972	AICDA	100	92.965	Ictidomys_tridecemlineatus
ENSBTAG00000018849	AICDA	91	93.956	ENSJJAG00000000908	Aicda	100	93.956	Jaculus_jaculus
ENSBTAG00000018849	AICDA	100	60.804	ENSKMAG00000006359	aicda	100	60.804	Kryptolebias_marmoratus
ENSBTAG00000018849	AICDA	100	56.731	ENSLBEG00000015351	aicda	100	57.619	Labrus_bergylta
ENSBTAG00000018849	AICDA	71	70.213	ENSLACG00000009320	aicda	94	70.213	Latimeria_chalumnae
ENSBTAG00000018849	AICDA	64	64.567	ENSLOCG00000008158	aicda	98	64.567	Lepisosteus_oculatus
ENSBTAG00000018849	AICDA	98	92.857	ENSLAFG00000000721	AICDA	100	92.857	Loxodonta_africana
ENSBTAG00000018849	AICDA	100	94.472	ENSMFAG00000037834	AICDA	100	94.472	Macaca_fascicularis
ENSBTAG00000018849	AICDA	100	94.472	ENSMMUG00000019134	AICDA	100	94.472	Macaca_mulatta
ENSBTAG00000018849	AICDA	100	94.472	ENSMNEG00000043421	AICDA	100	94.472	Macaca_nemestrina
ENSBTAG00000018849	AICDA	100	94.472	ENSMLEG00000040938	AICDA	100	94.472	Mandrillus_leucophaeus
ENSBTAG00000018849	AICDA	85	86.471	ENSMLEG00000039759	-	99	86.471	Mandrillus_leucophaeus
ENSBTAG00000018849	AICDA	100	58.095	ENSMAMG00000020032	aicda	98	58.095	Mastacembelus_armatus
ENSBTAG00000018849	AICDA	98	60.914	ENSMZEG00005016678	aicda	100	60.914	Maylandia_zebra
ENSBTAG00000018849	AICDA	99	87.310	ENSMGAG00000013942	AICDA	100	87.310	Meleagris_gallopavo
ENSBTAG00000018849	AICDA	100	92.965	ENSMAUG00000012229	Aicda	100	92.965	Mesocricetus_auratus
ENSBTAG00000018849	AICDA	100	94.472	ENSMICG00000011695	AICDA	100	94.472	Microcebus_murinus
ENSBTAG00000018849	AICDA	100	91.457	ENSMOCG00000022460	Aicda	100	91.457	Microtus_ochrogaster
ENSBTAG00000018849	AICDA	100	57.619	ENSMMOG00000016707	aicda	98	57.619	Mola_mola
ENSBTAG00000018849	AICDA	97	90.722	ENSMODG00000018002	AICDA	100	90.722	Monodelphis_domestica
ENSBTAG00000018849	AICDA	100	57.143	ENSMALG00000010442	aicda	99	56.667	Monopterus_albus
ENSBTAG00000018849	AICDA	72	90.909	MGP_CAROLIEiJ_G0028824	-	100	90.909	Mus_caroli
ENSBTAG00000018849	AICDA	100	91.457	ENSMUSG00000040627	Aicda	100	93.333	Mus_musculus
ENSBTAG00000018849	AICDA	100	92.462	MGP_PahariEiJ_G0022579	Aicda	100	96.667	Mus_pahari
ENSBTAG00000018849	AICDA	100	91.457	MGP_SPRETEiJ_G0029856	Aicda	100	93.333	Mus_spretus
ENSBTAG00000018849	AICDA	100	95.477	ENSMPUG00000017533	AICDA	94	95.477	Mustela_putorius_furo
ENSBTAG00000018849	AICDA	99	94.416	ENSMLUG00000007881	AICDA	99	94.416	Myotis_lucifugus
ENSBTAG00000018849	AICDA	100	93.467	ENSNGAG00000023430	Aicda	100	93.467	Nannospalax_galili
ENSBTAG00000018849	AICDA	100	57.619	ENSNBRG00000000070	aicda	96	62.105	Neolamprologus_brichardi
ENSBTAG00000018849	AICDA	100	93.970	ENSNLEG00000001917	AICDA	100	93.970	Nomascus_leucogenys
ENSBTAG00000018849	AICDA	99	89.340	ENSMEUG00000006570	AICDA	98	89.340	Notamacropus_eugenii
ENSBTAG00000018849	AICDA	98	88.265	ENSOPRG00000013486	AICDA	100	88.265	Ochotona_princeps
ENSBTAG00000018849	AICDA	98	91.837	ENSODEG00000001235	AICDA	100	91.209	Octodon_degus
ENSBTAG00000018849	AICDA	100	56.667	ENSONIG00000012823	aicda	98	56.667	Oreochromis_niloticus
ENSBTAG00000018849	AICDA	99	92.386	ENSOANG00000007150	AICDA	99	92.386	Ornithorhynchus_anatinus
ENSBTAG00000018849	AICDA	97	91.753	ENSOCUG00000023739	AICDA	100	91.753	Oryctolagus_cuniculus
ENSBTAG00000018849	AICDA	100	59.500	ENSORLG00000011705	aicda	100	59.500	Oryzias_latipes
ENSBTAG00000018849	AICDA	100	59.500	ENSORLG00020006547	aicda	100	59.500	Oryzias_latipes_hni
ENSBTAG00000018849	AICDA	98	59.898	ENSORLG00015012504	aicda	98	59.898	Oryzias_latipes_hsok
ENSBTAG00000018849	AICDA	100	59.500	ENSOMEG00000011880	aicda	98	59.500	Oryzias_melastigma
ENSBTAG00000018849	AICDA	99	94.416	ENSOGAG00000026770	AICDA	99	94.416	Otolemur_garnettii
ENSBTAG00000018849	AICDA	100	96.517	ENSOARG00000001982	AICDA	100	96.517	Ovis_aries
ENSBTAG00000018849	AICDA	100	94.472	ENSPPAG00000038169	AICDA	100	94.472	Pan_paniscus
ENSBTAG00000018849	AICDA	100	95.477	ENSPPRG00000012985	AICDA	100	95.477	Panthera_pardus
ENSBTAG00000018849	AICDA	100	95.477	ENSPTIG00000020074	AICDA	100	95.477	Panthera_tigris_altaica
ENSBTAG00000018849	AICDA	100	93.970	ENSPTRG00000004640	AICDA	100	93.970	Pan_troglodytes
ENSBTAG00000018849	AICDA	100	94.472	ENSPANG00000017883	AICDA	100	94.472	Papio_anubis
ENSBTAG00000018849	AICDA	91	64.211	ENSPKIG00000001499	aicda	100	64.211	Paramormyrops_kingsleyae
ENSBTAG00000018849	AICDA	99	88.832	ENSPSIG00000013283	AICDA	100	88.832	Pelodiscus_sinensis
ENSBTAG00000018849	AICDA	95	60.606	ENSPMGG00000014598	aicda	93	60.302	Periophthalmus_magnuspinnatus
ENSBTAG00000018849	AICDA	100	91.457	ENSPEMG00000008352	Aicda	100	91.457	Peromyscus_maniculatus_bairdii
ENSBTAG00000018849	AICDA	100	89.950	ENSPCIG00000023974	AICDA	100	89.950	Phascolarctos_cinereus
ENSBTAG00000018849	AICDA	95	54.098	ENSPFOG00000011197	aicda	97	54.098	Poecilia_formosa
ENSBTAG00000018849	AICDA	100	56.190	ENSPLAG00000014098	aicda	100	56.190	Poecilia_latipinna
ENSBTAG00000018849	AICDA	100	56.190	ENSPMEG00000024203	aicda	98	56.190	Poecilia_mexicana
ENSBTAG00000018849	AICDA	100	56.190	ENSPREG00000009041	aicda	98	56.190	Poecilia_reticulata
ENSBTAG00000018849	AICDA	99	94.924	ENSPPYG00000004242	AICDA	100	94.924	Pongo_abelii
ENSBTAG00000018849	AICDA	54	92.727	ENSPCAG00000009544	-	54	92.727	Procavia_capensis
ENSBTAG00000018849	AICDA	67	94.030	ENSPCOG00000003380	-	80	94.030	Propithecus_coquereli
ENSBTAG00000018849	AICDA	100	93.970	ENSPVAG00000012185	AICDA	100	93.970	Pteropus_vampyrus
ENSBTAG00000018849	AICDA	98	60.914	ENSPNYG00000000988	aicda	100	60.914	Pundamilia_nyererei
ENSBTAG00000018849	AICDA	100	62.679	ENSPNAG00000019237	aicda	99	63.107	Pygocentrus_nattereri
ENSBTAG00000018849	AICDA	100	92.965	ENSRNOG00000015478	Aicda	100	92.965	Rattus_norvegicus
ENSBTAG00000018849	AICDA	100	94.472	ENSRBIG00000026659	AICDA	100	94.472	Rhinopithecus_bieti
ENSBTAG00000018849	AICDA	100	94.472	ENSRROG00000032866	AICDA	100	94.472	Rhinopithecus_roxellana
ENSBTAG00000018849	AICDA	100	74.372	ENSSBOG00000035758	AICDA	100	74.372	Saimiri_boliviensis_boliviensis
ENSBTAG00000018849	AICDA	100	89.950	ENSSHAG00000008694	AICDA	100	89.950	Sarcophilus_harrisii
ENSBTAG00000018849	AICDA	100	61.836	ENSSFOG00015001695	aicda	98	61.836	Scleropages_formosus
ENSBTAG00000018849	AICDA	99	57.692	ENSSMAG00000012339	aicda	89	57.692	Scophthalmus_maximus
ENSBTAG00000018849	AICDA	99	59.898	ENSSDUG00000009894	aicda	97	59.898	Seriola_dumerili
ENSBTAG00000018849	AICDA	98	60.204	ENSSLDG00000023022	aicda	95	60.204	Seriola_lalandi_dorsalis
ENSBTAG00000018849	AICDA	97	80.412	ENSSPUG00000009022	AICDA	98	80.412	Sphenodon_punctatus
ENSBTAG00000018849	AICDA	100	55.714	ENSSPAG00000021499	aicda	66	55.714	Stegastes_partitus
ENSBTAG00000018849	AICDA	100	94.975	ENSSSCG00000000667	AICDA	100	94.975	Sus_scrofa
ENSBTAG00000018849	AICDA	99	79.695	ENSTGUG00000013115	AICDA	100	79.695	Taeniopygia_guttata
ENSBTAG00000018849	AICDA	99	55.981	ENSTRUG00000007079	aicda	98	55.981	Takifugu_rubripes
ENSBTAG00000018849	AICDA	99	56.190	ENSTNIG00000008118	aicda	98	56.190	Tetraodon_nigroviridis
ENSBTAG00000018849	AICDA	99	63.452	ENSTBEG00000002559	AICDA	100	63.452	Tupaia_belangeri
ENSBTAG00000018849	AICDA	91	97.802	ENSTTRG00000000703	AICDA	100	97.802	Tursiops_truncatus
ENSBTAG00000018849	AICDA	97	94.819	ENSUAMG00000011642	AICDA	98	94.819	Ursus_americanus
ENSBTAG00000018849	AICDA	97	94.819	ENSUMAG00000016540	AICDA	98	94.819	Ursus_maritimus
ENSBTAG00000018849	AICDA	74	97.279	ENSVPAG00000003950	AICDA	100	97.279	Vicugna_pacos
ENSBTAG00000018849	AICDA	99	68.687	ENSXETG00000023905	aicda	98	68.687	Xenopus_tropicalis
ENSBTAG00000018849	AICDA	98	56.633	ENSXCOG00000019386	aicda	90	56.633	Xiphophorus_couchianus
ENSBTAG00000018849	AICDA	98	58.163	ENSXMAG00000011889	aicda	91	58.163	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004126	cytidine deaminase activity	-	ISS	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0009972	cytidine deamination	-	ISS	Process
GO:0016446	somatic hypermutation of immunoglobulin genes	-	ISS	Process
GO:0080111	DNA demethylation	-	ISS	Process
GO:0090310	negative regulation of methylation-dependent chromatin silencing	-	ISS	Process