EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000019001 (Gene tree)
Gene ID: 507760
Gene Symbol: PRDM10
Alias: -
Full Name: Bos taurus PR/SET domain 10 (PRDM10)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 66338 bases
Position: chr29:36100991-36167328
Accession: NM_001191168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000064459	zf-C2H2	PF00096.26	1.3e-32	1	5
ENSBTAP00000064459	zf-C2H2	PF00096.26	1.3e-32	2	5
ENSBTAP00000064459	zf-C2H2	PF00096.26	1.3e-32	3	5
ENSBTAP00000064459	zf-C2H2	PF00096.26	1.3e-32	4	5
ENSBTAP00000064459	zf-C2H2	PF00096.26	1.3e-32	5	5
ENSBTAP00000069409	zf-C2H2	PF00096.26	1.6e-32	1	5
ENSBTAP00000069409	zf-C2H2	PF00096.26	1.6e-32	2	5
ENSBTAP00000069409	zf-C2H2	PF00096.26	1.6e-32	3	5
ENSBTAP00000069409	zf-C2H2	PF00096.26	1.6e-32	4	5
ENSBTAP00000069409	zf-C2H2	PF00096.26	1.6e-32	5	5
ENSBTAP00000071140	zf-C2H2	PF00096.26	2.5e-32	1	5
ENSBTAP00000071140	zf-C2H2	PF00096.26	2.5e-32	2	5
ENSBTAP00000071140	zf-C2H2	PF00096.26	2.5e-32	3	5
ENSBTAP00000071140	zf-C2H2	PF00096.26	2.5e-32	4	5
ENSBTAP00000071140	zf-C2H2	PF00096.26	2.5e-32	5	5
ENSBTAP00000025295	zf-C2H2	PF00096.26	2.6e-32	1	5
ENSBTAP00000025295	zf-C2H2	PF00096.26	2.6e-32	2	5
ENSBTAP00000025295	zf-C2H2	PF00096.26	2.6e-32	3	5
ENSBTAP00000025295	zf-C2H2	PF00096.26	2.6e-32	4	5
ENSBTAP00000025295	zf-C2H2	PF00096.26	2.6e-32	5	5
ENSBTAP00000064459	zf-met	PF12874.7	6.3e-06	1	2
ENSBTAP00000064459	zf-met	PF12874.7	6.3e-06	2	2
ENSBTAP00000069409	zf-met	PF12874.7	6.7e-06	1	2
ENSBTAP00000069409	zf-met	PF12874.7	6.7e-06	2	2
ENSBTAP00000071140	zf-met	PF12874.7	7.7e-06	1	2
ENSBTAP00000071140	zf-met	PF12874.7	7.7e-06	2	2
ENSBTAP00000025295	zf-met	PF12874.7	7.8e-06	1	2
ENSBTAP00000025295	zf-met	PF12874.7	7.8e-06	2	2
ENSBTAP00000064459	zf-C2H2_jaz	PF12171.8	1.8e-17	1	1
ENSBTAP00000069409	zf-C2H2_jaz	PF12171.8	2.3e-17	1	1
ENSBTAP00000071140	zf-C2H2_jaz	PF12171.8	3.4e-17	1	1
ENSBTAP00000025295	zf-C2H2_jaz	PF12171.8	3.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000087505	-	6152	-	ENSBTAP00000069409	1103 (aa)	XP_005226901	UPI000383F220
ENSBTAT00000084832	-	6089	-	ENSBTAP00000064459	1082 (aa)	-	-
ENSBTAT00000025295	-	3465	-	ENSBTAP00000025295	1154 (aa)	-	E1BE45
ENSBTAT00000084970	-	6293	XM_005226842	ENSBTAP00000071140	1150 (aa)	XP_005226899	UPI0000EBE722

Gene Model

Click here to download ENSBTAG00000019001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000019001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000019001	PRDM10	57	37.363	ENSBTAG00000012111	PRDM5	94	37.363

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000019001	PRDM10	100	94.118	ENSG00000170325	PRDM10	100	93.534	Homo_sapiens
ENSBTAG00000019001	PRDM10	100	93.389	ENSAMEG00000002425	PRDM10	100	91.039	Ailuropoda_melanoleuca
ENSBTAG00000019001	PRDM10	100	84.606	ENSAPLG00000004858	PRDM10	100	84.469	Anas_platyrhynchos
ENSBTAG00000019001	PRDM10	100	93.725	ENSANAG00000022064	PRDM10	95	88.364	Aotus_nancymaae
ENSBTAG00000019001	PRDM10	100	93.725	ENSCJAG00000009235	PRDM10	100	93.701	Callithrix_jacchus
ENSBTAG00000019001	PRDM10	100	93.029	ENSCAFG00000010164	PRDM10	100	92.969	Canis_familiaris
ENSBTAG00000019001	PRDM10	100	92.188	ENSCAFG00020010152	PRDM10	100	91.816	Canis_lupus_dingo
ENSBTAG00000019001	PRDM10	100	99.608	ENSCHIG00000026530	PRDM10	100	99.391	Capra_hircus
ENSBTAG00000019001	PRDM10	100	94.510	ENSTSYG00000000544	PRDM10	100	94.224	Carlito_syrichta
ENSBTAG00000019001	PRDM10	100	84.820	ENSCAPG00000017296	PRDM10	97	89.655	Cavia_aperea
ENSBTAG00000019001	PRDM10	99	82.791	ENSCPOG00000000389	PRDM10	98	85.601	Cavia_porcellus
ENSBTAG00000019001	PRDM10	100	94.118	ENSCCAG00000024567	PRDM10	100	93.615	Cebus_capucinus
ENSBTAG00000019001	PRDM10	100	93.725	ENSCATG00000040031	PRDM10	100	93.934	Cercocebus_atys
ENSBTAG00000019001	PRDM10	100	89.847	ENSCLAG00000014605	PRDM10	100	90.488	Chinchilla_lanigera
ENSBTAG00000019001	PRDM10	100	94.118	ENSCSAG00000002202	PRDM10	100	94.107	Chlorocebus_sabaeus
ENSBTAG00000019001	PRDM10	100	84.863	ENSCPBG00000026880	PRDM10	99	81.629	Chrysemys_picta_bellii
ENSBTAG00000019001	PRDM10	100	93.725	ENSCANG00000032669	PRDM10	100	93.701	Colobus_angolensis_palliatus
ENSBTAG00000019001	PRDM10	100	91.947	ENSCGRG00001021647	Prdm10	98	91.263	Cricetulus_griseus_chok1gshd
ENSBTAG00000019001	PRDM10	100	91.947	ENSCGRG00000006562	Prdm10	98	91.263	Cricetulus_griseus_crigri
ENSBTAG00000019001	PRDM10	86	93.776	ENSDNOG00000001366	PRDM10	95	93.776	Dasypus_novemcinctus
ENSBTAG00000019001	PRDM10	100	91.847	ENSDORG00000014292	Prdm10	100	92.021	Dipodomys_ordii
ENSBTAG00000019001	PRDM10	100	96.078	ENSEASG00005022914	PRDM10	100	95.486	Equus_asinus_asinus
ENSBTAG00000019001	PRDM10	100	96.078	ENSECAG00000011499	PRDM10	100	95.399	Equus_caballus
ENSBTAG00000019001	PRDM10	98	94.867	ENSFCAG00000004111	PRDM10	96	95.221	Felis_catus
ENSBTAG00000019001	PRDM10	100	83.971	ENSFALG00000004873	PRDM10	96	84.211	Ficedula_albicollis
ENSBTAG00000019001	PRDM10	100	89.627	ENSFDAG00000017311	PRDM10	97	92.405	Fukomys_damarensis
ENSBTAG00000019001	PRDM10	100	84.845	ENSGALG00000033660	PRDM10	99	85.189	Gallus_gallus
ENSBTAG00000019001	PRDM10	92	65.432	ENSGACG00000012293	prdm10	99	65.432	Gasterosteus_aculeatus
ENSBTAG00000019001	PRDM10	100	82.956	ENSGAGG00000012523	PRDM10	99	82.975	Gopherus_agassizii
ENSBTAG00000019001	PRDM10	100	94.510	ENSGGOG00000015359	PRDM10	100	93.971	Gorilla_gorilla
ENSBTAG00000019001	PRDM10	100	89.578	ENSHGLG00000001106	PRDM10	100	90.119	Heterocephalus_glaber_female
ENSBTAG00000019001	PRDM10	100	90.023	ENSHGLG00100002350	PRDM10	100	90.273	Heterocephalus_glaber_male
ENSBTAG00000019001	PRDM10	100	94.510	ENSSTOG00000002015	PRDM10	100	93.853	Ictidomys_tridecemlineatus
ENSBTAG00000019001	PRDM10	100	87.255	ENSJJAG00000021493	Prdm10	100	87.433	Jaculus_jaculus
ENSBTAG00000019001	PRDM10	98	92.952	ENSLAFG00000031867	PRDM10	100	90.026	Loxodonta_africana
ENSBTAG00000019001	PRDM10	100	94.118	ENSMFAG00000031008	PRDM10	100	94.128	Macaca_fascicularis
ENSBTAG00000019001	PRDM10	100	94.118	ENSMMUG00000017555	PRDM10	100	94.128	Macaca_mulatta
ENSBTAG00000019001	PRDM10	100	94.118	ENSMNEG00000036493	PRDM10	100	94.041	Macaca_nemestrina
ENSBTAG00000019001	PRDM10	94	93.725	ENSMLEG00000042028	PRDM10	99	94.937	Mandrillus_leucophaeus
ENSBTAG00000019001	PRDM10	100	84.551	ENSMGAG00000001112	PRDM10	100	81.605	Meleagris_gallopavo
ENSBTAG00000019001	PRDM10	100	94.510	ENSMICG00000013888	PRDM10	100	93.869	Microcebus_murinus
ENSBTAG00000019001	PRDM10	100	90.082	ENSMOCG00000021853	Prdm10	100	89.670	Microtus_ochrogaster
ENSBTAG00000019001	PRDM10	77	84.834	ENSMODG00000004979	PRDM10	99	87.075	Monodelphis_domestica
ENSBTAG00000019001	PRDM10	100	91.587	ENSMUSG00000042496	Prdm10	100	89.670	Mus_musculus
ENSBTAG00000019001	PRDM10	100	91.866	MGP_SPRETEiJ_G0033061	-	100	91.544	Mus_spretus
ENSBTAG00000019001	PRDM10	100	95.686	ENSMPUG00000008711	PRDM10	99	94.792	Mustela_putorius_furo
ENSBTAG00000019001	PRDM10	100	96.078	ENSMLUG00000013051	PRDM10	100	94.291	Myotis_lucifugus
ENSBTAG00000019001	PRDM10	100	92.788	ENSNGAG00000000580	Prdm10	100	92.975	Nannospalax_galili
ENSBTAG00000019001	PRDM10	100	94.902	ENSNLEG00000007488	PRDM10	100	94.128	Nomascus_leucogenys
ENSBTAG00000019001	PRDM10	100	89.031	ENSODEG00000005309	PRDM10	99	93.506	Octodon_degus
ENSBTAG00000019001	PRDM10	100	79.412	ENSOANG00000000577	-	100	78.498	Ornithorhynchus_anatinus
ENSBTAG00000019001	PRDM10	100	92.157	ENSOCUG00000003736	PRDM10	100	92.454	Oryctolagus_cuniculus
ENSBTAG00000019001	PRDM10	100	92.549	ENSOGAG00000010723	PRDM10	100	92.573	Otolemur_garnettii
ENSBTAG00000019001	PRDM10	100	99.608	ENSOARG00000014507	PRDM10	100	99.565	Ovis_aries
ENSBTAG00000019001	PRDM10	100	94.118	ENSPPAG00000042881	PRDM10	100	93.798	Pan_paniscus
ENSBTAG00000019001	PRDM10	100	94.550	ENSPPRG00000007002	PRDM10	100	94.896	Panthera_pardus
ENSBTAG00000019001	PRDM10	100	94.464	ENSPTIG00000013331	PRDM10	100	94.810	Panthera_tigris_altaica
ENSBTAG00000019001	PRDM10	100	94.118	ENSPTRG00000004477	PRDM10	100	93.971	Pan_troglodytes
ENSBTAG00000019001	PRDM10	100	94.118	ENSPANG00000017470	PRDM10	100	93.955	Papio_anubis
ENSBTAG00000019001	PRDM10	100	90.739	ENSPEMG00000014985	Prdm10	100	90.128	Peromyscus_maniculatus_bairdii
ENSBTAG00000019001	PRDM10	100	94.510	ENSPPYG00000004061	PRDM10	100	93.945	Pongo_abelii
ENSBTAG00000019001	PRDM10	92	83.007	ENSPCAG00000014514	PRDM10	100	83.287	Procavia_capensis
ENSBTAG00000019001	PRDM10	100	94.118	ENSPCOG00000023406	PRDM10	95	88.727	Propithecus_coquereli
ENSBTAG00000019001	PRDM10	100	95.686	ENSPVAG00000012764	PRDM10	100	95.069	Pteropus_vampyrus
ENSBTAG00000019001	PRDM10	100	92.188	ENSRNOG00000007853	Prdm10	100	91.688	Rattus_norvegicus
ENSBTAG00000019001	PRDM10	100	94.118	ENSRBIG00000030924	PRDM10	100	93.707	Rhinopithecus_bieti
ENSBTAG00000019001	PRDM10	100	94.118	ENSRROG00000034334	PRDM10	100	93.707	Rhinopithecus_roxellana
ENSBTAG00000019001	PRDM10	100	94.118	ENSSBOG00000008773	PRDM10	100	93.707	Saimiri_boliviensis_boliviensis
ENSBTAG00000019001	PRDM10	99	85.948	ENSSHAG00000004503	PRDM10	99	86.908	Sarcophilus_harrisii
ENSBTAG00000019001	PRDM10	67	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSBTAG00000019001	PRDM10	100	83.890	ENSSPUG00000001178	PRDM10	97	84.883	Sphenodon_punctatus
ENSBTAG00000019001	PRDM10	100	95.187	ENSSSCG00000015243	PRDM10	100	94.768	Sus_scrofa
ENSBTAG00000019001	PRDM10	100	83.055	ENSTGUG00000000530	PRDM10	100	82.874	Taeniopygia_guttata
ENSBTAG00000019001	PRDM10	94	93.846	ENSTBEG00000007221	PRDM10	94	92.478	Tupaia_belangeri
ENSBTAG00000019001	PRDM10	100	95.444	ENSTTRG00000009189	PRDM10	100	94.021	Tursiops_truncatus
ENSBTAG00000019001	PRDM10	91	93.160	ENSUAMG00000018832	PRDM10	94	94.759	Ursus_americanus
ENSBTAG00000019001	PRDM10	100	93.630	ENSUMAG00000003167	PRDM10	99	94.787	Ursus_maritimus
ENSBTAG00000019001	PRDM10	100	94.902	ENSVVUG00000019878	PRDM10	100	94.184	Vulpes_vulpes
ENSBTAG00000019001	PRDM10	100	71.823	ENSXETG00000032173	PRDM10	100	68.395	Xenopus_tropicalis