EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000019091 (Gene tree)
Gene ID: 768060
Gene Symbol: RNPC3
Alias: -
Full Name: Bos taurus RNA binding region (RNP1%2C RRM) containing 3 (RNPC3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 27389 bases
Position: chr3:39855791-39883179
Accession: NM_001077117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000062208	RRM_1	PF00076.22	2.2e-17	1	2
ENSBTAP00000062208	RRM_1	PF00076.22	2.2e-17	2	2
ENSBTAP00000025416	RRM_1	PF00076.22	2.3e-17	1	2
ENSBTAP00000025416	RRM_1	PF00076.22	2.3e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000077787	-	2270	-	ENSBTAP00000062208	517 (aa)	XP_005204249	UPI0003841420
ENSBTAT00000025416	-	1830	-	ENSBTAP00000025416	516 (aa)	XP_024845541	F1MJQ8

Gene Model

Click here to download ENSBTAG00000019091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000019091's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000019091	RNPC3	100	93.617	ENSG00000185946	RNPC3	100	93.617	Homo_sapiens
ENSBTAG00000019091	RNPC3	95	56.970	ENSAPOG00000017371	rnpc3	97	56.970	Acanthochromis_polyacanthus
ENSBTAG00000019091	RNPC3	98	93.517	ENSAMEG00000001694	RNPC3	100	92.692	Ailuropoda_melanoleuca
ENSBTAG00000019091	RNPC3	95	53.707	ENSACIG00000021043	rnpc3	97	53.507	Amphilophus_citrinellus
ENSBTAG00000019091	RNPC3	95	56.200	ENSAOCG00000014052	rnpc3	95	56.200	Amphiprion_ocellaris
ENSBTAG00000019091	RNPC3	95	56.200	ENSAPEG00000008739	rnpc3	95	56.200	Amphiprion_percula
ENSBTAG00000019091	RNPC3	95	54.800	ENSATEG00000021263	rnpc3	97	54.800	Anabas_testudineus
ENSBTAG00000019091	RNPC3	87	68.943	ENSAPLG00000015605	RNPC3	99	69.824	Anas_platyrhynchos
ENSBTAG00000019091	RNPC3	95	67.886	ENSACAG00000002029	RNPC3	96	68.675	Anolis_carolinensis
ENSBTAG00000019091	RNPC3	100	92.843	ENSANAG00000019950	RNPC3	100	92.843	Aotus_nancymaae
ENSBTAG00000019091	RNPC3	95	54.970	ENSACLG00000014702	rnpc3	96	54.970	Astatotilapia_calliptera
ENSBTAG00000019091	RNPC3	94	58.032	ENSAMXG00000033372	rnpc3	96	58.032	Astyanax_mexicanus
ENSBTAG00000019091	RNPC3	100	88.201	ENSCJAG00000035686	RNPC3	100	88.588	Callithrix_jacchus
ENSBTAG00000019091	RNPC3	100	93.629	ENSCAFG00000019972	RNPC3	100	93.629	Canis_familiaris
ENSBTAG00000019091	RNPC3	100	93.629	ENSCAFG00020011300	RNPC3	100	93.629	Canis_lupus_dingo
ENSBTAG00000019091	RNPC3	100	98.839	ENSCHIG00000020361	RNPC3	100	98.839	Capra_hircus
ENSBTAG00000019091	RNPC3	100	90.522	ENSTSYG00000030256	RNPC3	100	90.522	Carlito_syrichta
ENSBTAG00000019091	RNPC3	84	78.947	ENSCAPG00000013600	RNPC3	99	77.803	Cavia_aperea
ENSBTAG00000019091	RNPC3	100	90.329	ENSCPOG00000031638	RNPC3	100	90.329	Cavia_porcellus
ENSBTAG00000019091	RNPC3	100	92.843	ENSCCAG00000024301	RNPC3	100	92.843	Cebus_capucinus
ENSBTAG00000019091	RNPC3	98	71.006	ENSCATG00000035930	-	99	69.368	Cercocebus_atys
ENSBTAG00000019091	RNPC3	99	93.204	ENSCATG00000002086	RNPC3	99	93.204	Cercocebus_atys
ENSBTAG00000019091	RNPC3	100	88.760	ENSCLAG00000005169	RNPC3	100	87.791	Chinchilla_lanigera
ENSBTAG00000019091	RNPC3	99	93.010	ENSCSAG00000001519	RNPC3	99	93.010	Chlorocebus_sabaeus
ENSBTAG00000019091	RNPC3	95	71.687	ENSCPBG00000028311	RNPC3	95	71.687	Chrysemys_picta_bellii
ENSBTAG00000019091	RNPC3	95	37.160	ENSCING00000021276	-	98	37.702	Ciona_intestinalis
ENSBTAG00000019091	RNPC3	59	61.667	ENSCSAVG00000002800	-	74	61.667	Ciona_savignyi
ENSBTAG00000019091	RNPC3	99	93.010	ENSCANG00000031444	RNPC3	99	93.010	Colobus_angolensis_palliatus
ENSBTAG00000019091	RNPC3	99	91.068	ENSCGRG00001019276	Rnpc3	100	91.068	Cricetulus_griseus_chok1gshd
ENSBTAG00000019091	RNPC3	87	91.574	ENSCGRG00000000053	Rnpc3	100	91.574	Cricetulus_griseus_crigri
ENSBTAG00000019091	RNPC3	94	54.361	ENSCSEG00000013475	rnpc3	96	54.361	Cynoglossus_semilaevis
ENSBTAG00000019091	RNPC3	94	55.578	ENSCVAG00000002645	rnpc3	97	55.248	Cyprinodon_variegatus
ENSBTAG00000019091	RNPC3	95	56.410	ENSDARG00000011247	rnpc3	93	64.740	Danio_rerio
ENSBTAG00000019091	RNPC3	100	91.876	ENSDNOG00000047498	-	100	91.876	Dasypus_novemcinctus
ENSBTAG00000019091	RNPC3	100	91.876	ENSDNOG00000044555	-	100	91.876	Dasypus_novemcinctus
ENSBTAG00000019091	RNPC3	99	90.310	ENSDORG00000027343	Rnpc3	99	90.310	Dipodomys_ordii
ENSBTAG00000019091	RNPC3	95	49.116	ENSEBUG00000002068	rnpc3	97	48.915	Eptatretus_burgeri
ENSBTAG00000019091	RNPC3	100	93.050	ENSEASG00005015957	RNPC3	100	93.050	Equus_asinus_asinus
ENSBTAG00000019091	RNPC3	100	92.857	ENSECAG00000021148	RNPC3	100	92.857	Equus_caballus
ENSBTAG00000019091	RNPC3	95	52.952	ENSELUG00000002264	rnpc3	97	51.040	Esox_lucius
ENSBTAG00000019091	RNPC3	100	93.822	ENSFCAG00000024312	RNPC3	100	93.822	Felis_catus
ENSBTAG00000019091	RNPC3	87	71.145	ENSFALG00000002580	RNPC3	99	71.698	Ficedula_albicollis
ENSBTAG00000019091	RNPC3	99	91.473	ENSFDAG00000019948	RNPC3	100	91.473	Fukomys_damarensis
ENSBTAG00000019091	RNPC3	95	51.308	ENSFHEG00000020647	rnpc3	98	49.902	Fundulus_heteroclitus
ENSBTAG00000019091	RNPC3	95	54.200	ENSGMOG00000019213	rnpc3	95	53.333	Gadus_morhua
ENSBTAG00000019091	RNPC3	95	72.121	ENSGALG00000005162	RNPC3	89	71.515	Gallus_gallus
ENSBTAG00000019091	RNPC3	95	53.119	ENSGAFG00000017236	rnpc3	96	53.320	Gambusia_affinis
ENSBTAG00000019091	RNPC3	95	54.509	ENSGACG00000002048	rnpc3	96	54.871	Gasterosteus_aculeatus
ENSBTAG00000019091	RNPC3	95	71.687	ENSGAGG00000008438	RNPC3	95	71.888	Gopherus_agassizii
ENSBTAG00000019091	RNPC3	99	75.048	ENSGGOG00000026201	-	99	75.969	Gorilla_gorilla
ENSBTAG00000019091	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSBTAG00000019091	RNPC3	100	90.909	ENSHGLG00000001708	RNPC3	100	90.909	Heterocephalus_glaber_female
ENSBTAG00000019091	RNPC3	100	90.909	ENSHGLG00100003005	RNPC3	100	90.909	Heterocephalus_glaber_male
ENSBTAG00000019091	RNPC3	95	53.600	ENSHCOG00000017135	rnpc3	97	54.016	Hippocampus_comes
ENSBTAG00000019091	RNPC3	95	56.914	ENSIPUG00000002916	rnpc3	97	56.064	Ictalurus_punctatus
ENSBTAG00000019091	RNPC3	100	91.296	ENSSTOG00000025020	RNPC3	100	91.296	Ictidomys_tridecemlineatus
ENSBTAG00000019091	RNPC3	99	88.372	ENSJJAG00000010203	Rnpc3	100	89.341	Jaculus_jaculus
ENSBTAG00000019091	RNPC3	95	55.466	ENSKMAG00000017358	rnpc3	97	54.871	Kryptolebias_marmoratus
ENSBTAG00000019091	RNPC3	95	56.200	ENSLBEG00000024901	rnpc3	95	56.200	Labrus_bergylta
ENSBTAG00000019091	RNPC3	97	62.103	ENSLACG00000005720	RNPC3	90	63.692	Latimeria_chalumnae
ENSBTAG00000019091	RNPC3	95	58.487	ENSLOCG00000007986	rnpc3	96	60.736	Lepisosteus_oculatus
ENSBTAG00000019091	RNPC3	99	89.922	ENSLAFG00000032342	RNPC3	100	89.922	Loxodonta_africana
ENSBTAG00000019091	RNPC3	99	93.010	ENSMFAG00000002004	RNPC3	99	93.010	Macaca_fascicularis
ENSBTAG00000019091	RNPC3	98	68.047	ENSMFAG00000002917	-	99	67.913	Macaca_fascicularis
ENSBTAG00000019091	RNPC3	83	84.651	ENSMMUG00000002098	-	93	84.651	Macaca_mulatta
ENSBTAG00000019091	RNPC3	99	93.010	ENSMMUG00000018039	RNPC3	99	93.010	Macaca_mulatta
ENSBTAG00000019091	RNPC3	99	88.155	ENSMNEG00000033950	RNPC3	99	88.155	Macaca_nemestrina
ENSBTAG00000019091	RNPC3	98	64.173	ENSMNEG00000029209	-	99	66.929	Macaca_nemestrina
ENSBTAG00000019091	RNPC3	99	93.204	ENSMLEG00000033628	RNPC3	99	93.204	Mandrillus_leucophaeus
ENSBTAG00000019091	RNPC3	98	70.117	ENSMLEG00000034644	-	98	68.932	Mandrillus_leucophaeus
ENSBTAG00000019091	RNPC3	95	51.497	ENSMAMG00000007496	rnpc3	97	50.291	Mastacembelus_armatus
ENSBTAG00000019091	RNPC3	95	54.076	ENSMZEG00005020233	rnpc3	97	54.076	Maylandia_zebra
ENSBTAG00000019091	RNPC3	87	70.614	ENSMGAG00000006381	RNPC3	99	71.053	Meleagris_gallopavo
ENSBTAG00000019091	RNPC3	97	93.173	ENSMAUG00000001358	Rnpc3	100	92.039	Mesocricetus_auratus
ENSBTAG00000019091	RNPC3	99	93.023	ENSMICG00000029591	RNPC3	99	93.023	Microcebus_murinus
ENSBTAG00000019091	RNPC3	97	91.784	ENSMOCG00000013423	Rnpc3	100	90.329	Microtus_ochrogaster
ENSBTAG00000019091	RNPC3	95	52.333	ENSMMOG00000005309	rnpc3	97	52.008	Mola_mola
ENSBTAG00000019091	RNPC3	99	78.488	ENSMODG00000002946	RNPC3	99	78.488	Monodelphis_domestica
ENSBTAG00000019091	RNPC3	95	52.871	ENSMALG00000015471	rnpc3	97	52.988	Monopterus_albus
ENSBTAG00000019091	RNPC3	99	89.515	MGP_CAROLIEiJ_G0025555	Rnpc3	100	89.764	Mus_caroli
ENSBTAG00000019091	RNPC3	99	89.903	ENSMUSG00000027981	Rnpc3	100	89.903	Mus_musculus
ENSBTAG00000019091	RNPC3	99	89.320	MGP_PahariEiJ_G0027001	Rnpc3	100	89.567	Mus_pahari
ENSBTAG00000019091	RNPC3	99	89.320	MGP_SPRETEiJ_G0026505	Rnpc3	100	89.567	Mus_spretus
ENSBTAG00000019091	RNPC3	100	92.650	ENSMPUG00000007349	RNPC3	100	92.650	Mustela_putorius_furo
ENSBTAG00000019091	RNPC3	100	89.555	ENSMLUG00000028743	RNPC3	100	89.555	Myotis_lucifugus
ENSBTAG00000019091	RNPC3	99	89.689	ENSNGAG00000010939	Rnpc3	100	89.729	Nannospalax_galili
ENSBTAG00000019091	RNPC3	95	54.767	ENSNBRG00000012196	rnpc3	93	54.767	Neolamprologus_brichardi
ENSBTAG00000019091	RNPC3	100	93.798	ENSNLEG00000012013	RNPC3	100	93.798	Nomascus_leucogenys
ENSBTAG00000019091	RNPC3	100	87.209	ENSODEG00000007612	RNPC3	100	87.209	Octodon_degus
ENSBTAG00000019091	RNPC3	95	55.263	ENSONIG00000004770	rnpc3	99	55.263	Oreochromis_niloticus
ENSBTAG00000019091	RNPC3	90	77.897	ENSOANG00000008220	RNPC3	99	78.326	Ornithorhynchus_anatinus
ENSBTAG00000019091	RNPC3	100	91.683	ENSOCUG00000004016	RNPC3	100	91.683	Oryctolagus_cuniculus
ENSBTAG00000019091	RNPC3	95	53.479	ENSORLG00000005694	rnpc3	97	53.479	Oryzias_latipes
ENSBTAG00000019091	RNPC3	95	54.076	ENSORLG00020005513	rnpc3	97	54.076	Oryzias_latipes_hni
ENSBTAG00000019091	RNPC3	95	53.678	ENSORLG00015002179	rnpc3	97	53.678	Oryzias_latipes_hsok
ENSBTAG00000019091	RNPC3	95	54.343	ENSOMEG00000017737	rnpc3	97	55.444	Oryzias_melastigma
ENSBTAG00000019091	RNPC3	100	92.650	ENSOGAG00000026182	RNPC3	100	92.650	Otolemur_garnettii
ENSBTAG00000019091	RNPC3	100	98.646	ENSOARG00000018719	RNPC3	100	98.646	Ovis_aries
ENSBTAG00000019091	RNPC3	100	76.015	ENSPPAG00000030278	-	100	76.209	Pan_paniscus
ENSBTAG00000019091	RNPC3	100	93.243	ENSPPAG00000037459	RNPC3	100	93.243	Pan_paniscus
ENSBTAG00000019091	RNPC3	100	93.629	ENSPPRG00000020246	RNPC3	100	93.629	Panthera_pardus
ENSBTAG00000019091	RNPC3	98	93.701	ENSPTIG00000009887	RNPC3	100	93.701	Panthera_tigris_altaica
ENSBTAG00000019091	RNPC3	100	76.015	ENSPTRG00000044227	-	100	76.015	Pan_troglodytes
ENSBTAG00000019091	RNPC3	100	93.617	ENSPTRG00000033902	RNPC3	100	93.617	Pan_troglodytes
ENSBTAG00000019091	RNPC3	98	73.674	ENSPANG00000029957	-	100	72.299	Papio_anubis
ENSBTAG00000019091	RNPC3	99	93.191	ENSPANG00000012137	RNPC3	99	93.191	Papio_anubis
ENSBTAG00000019091	RNPC3	95	53.082	ENSPKIG00000008828	rnpc3	95	51.874	Paramormyrops_kingsleyae
ENSBTAG00000019091	RNPC3	63	68.675	ENSPSIG00000007396	RNPC3	99	67.470	Pelodiscus_sinensis
ENSBTAG00000019091	RNPC3	93	51.951	ENSPMGG00000011742	rnpc3	95	52.675	Periophthalmus_magnuspinnatus
ENSBTAG00000019091	RNPC3	88	91.228	ENSPEMG00000020112	Rnpc3	100	92.018	Peromyscus_maniculatus_bairdii
ENSBTAG00000019091	RNPC3	96	45.402	ENSPMAG00000003778	rnpc3	98	45.315	Petromyzon_marinus
ENSBTAG00000019091	RNPC3	99	78.876	ENSPCIG00000004415	-	99	78.876	Phascolarctos_cinereus
ENSBTAG00000019091	RNPC3	97	52.860	ENSPFOG00000009895	rnpc3	99	52.860	Poecilia_formosa
ENSBTAG00000019091	RNPC3	95	53.521	ENSPLAG00000012023	rnpc3	97	53.521	Poecilia_latipinna
ENSBTAG00000019091	RNPC3	98	52.621	ENSPMEG00000003663	rnpc3	99	53.057	Poecilia_mexicana
ENSBTAG00000019091	RNPC3	96	53.493	ENSPREG00000010206	rnpc3	97	53.614	Poecilia_reticulata
ENSBTAG00000019091	RNPC3	84	89.862	ENSPPYG00000001102	RNPC3	99	89.862	Pongo_abelii
ENSBTAG00000019091	RNPC3	95	54.767	ENSPNYG00000020603	rnpc3	96	54.767	Pundamilia_nyererei
ENSBTAG00000019091	RNPC3	97	53.606	ENSPNAG00000000524	rnpc3	90	53.801	Pygocentrus_nattereri
ENSBTAG00000019091	RNPC3	99	87.961	ENSRNOG00000017310	Rnpc3	100	87.961	Rattus_norvegicus
ENSBTAG00000019091	RNPC3	99	87.791	ENSRBIG00000043897	RNPC3	99	87.791	Rhinopithecus_bieti
ENSBTAG00000019091	RNPC3	99	93.592	ENSRROG00000032334	RNPC3	99	93.592	Rhinopithecus_roxellana
ENSBTAG00000019091	RNPC3	100	92.248	ENSSBOG00000024473	RNPC3	100	92.248	Saimiri_boliviensis_boliviensis
ENSBTAG00000019091	RNPC3	99	78.488	ENSSHAG00000011859	RNPC3	99	78.488	Sarcophilus_harrisii
ENSBTAG00000019091	RNPC3	96	59.839	ENSSFOG00015013055	rnpc3	99	58.008	Scleropages_formosus
ENSBTAG00000019091	RNPC3	95	52.400	ENSSMAG00000020346	rnpc3	97	51.456	Scophthalmus_maximus
ENSBTAG00000019091	RNPC3	95	55.179	ENSSDUG00000006600	rnpc3	96	55.179	Seriola_dumerili
ENSBTAG00000019091	RNPC3	95	55.090	ENSSLDG00000007979	rnpc3	96	55.000	Seriola_lalandi_dorsalis
ENSBTAG00000019091	RNPC3	96	65.538	ENSSPUG00000003872	-	93	65.538	Sphenodon_punctatus
ENSBTAG00000019091	RNPC3	95	70.624	ENSSPUG00000008539	-	94	70.968	Sphenodon_punctatus
ENSBTAG00000019091	RNPC3	95	55.601	ENSSPAG00000005633	rnpc3	97	56.212	Stegastes_partitus
ENSBTAG00000019091	RNPC3	100	93.424	ENSSSCG00000037254	RNPC3	100	92.070	Sus_scrofa
ENSBTAG00000019091	RNPC3	87	70.925	ENSTGUG00000004795	-	99	70.044	Taeniopygia_guttata
ENSBTAG00000019091	RNPC3	95	54.949	ENSTNIG00000018963	rnpc3	97	54.949	Tetraodon_nigroviridis
ENSBTAG00000019091	RNPC3	98	94.094	ENSUMAG00000007775	RNPC3	100	94.094	Ursus_maritimus
ENSBTAG00000019091	RNPC3	100	93.629	ENSVVUG00000000331	RNPC3	100	93.629	Vulpes_vulpes
ENSBTAG00000019091	RNPC3	95	52.200	ENSXETG00000025027	rnpc3	97	52.200	Xenopus_tropicalis
ENSBTAG00000019091	RNPC3	96	51.751	ENSXCOG00000005013	rnpc3	97	50.382	Xiphophorus_couchianus
ENSBTAG00000019091	RNPC3	95	53.507	ENSXMAG00000006495	rnpc3	97	53.479	Xiphophorus_maculatus