EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000019211 (Gene tree)
Gene ID: 518501
Gene Symbol: BRIX1
Alias: -
Full Name: BRX1%2C biogenesis of ribosomes
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 9628 bases
Position: chr20:39219143-39228770
Accession: 26569
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000056776	Brix	PF04427.18	1.7e-39	1	1
ENSBTAP00000025572	Brix	PF04427.18	1.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000086085	-	2028	-	ENSBTAP00000056776	353 (aa)	-	UPI00005B2A24
ENSBTAT00000025572	-	1017	-	ENSBTAP00000025572	338 (aa)	-	Q3SZZ0

Gene Model

Click here to download ENSBTAG00000019211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000019211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000019211	BRIX1	100	93.768	ENSG00000113460	BRIX1	100	93.768	Homo_sapiens
ENSBTAG00000019211	BRIX1	97	74.344	ENSAPOG00000020334	bxdc2	98	74.344	Acanthochromis_polyacanthus
ENSBTAG00000019211	BRIX1	100	93.484	ENSAMEG00000003295	BRIX1	100	93.484	Ailuropoda_melanoleuca
ENSBTAG00000019211	BRIX1	91	74.303	ENSACIG00000017003	bxdc2	98	73.235	Amphilophus_citrinellus
ENSBTAG00000019211	BRIX1	86	79.412	ENSAOCG00000000941	bxdc2	98	74.636	Amphiprion_ocellaris
ENSBTAG00000019211	BRIX1	97	74.344	ENSAPEG00000017124	bxdc2	98	74.636	Amphiprion_percula
ENSBTAG00000019211	BRIX1	98	72.046	ENSATEG00000016635	bxdc2	99	71.839	Anabas_testudineus
ENSBTAG00000019211	BRIX1	82	75.000	ENSAPLG00000006647	BRIX1	98	75.000	Anas_platyrhynchos
ENSBTAG00000019211	BRIX1	99	73.654	ENSACAG00000008586	BRIX1	99	73.654	Anolis_carolinensis
ENSBTAG00000019211	BRIX1	100	89.807	ENSANAG00000022329	-	100	89.807	Aotus_nancymaae
ENSBTAG00000019211	BRIX1	100	84.419	ENSANAG00000010505	-	100	84.419	Aotus_nancymaae
ENSBTAG00000019211	BRIX1	97	73.178	ENSACLG00000005213	bxdc2	98	73.178	Astatotilapia_calliptera
ENSBTAG00000019211	BRIX1	87	72.964	ENSAMXG00000043121	bxdc2	99	68.012	Astyanax_mexicanus
ENSBTAG00000019211	BRIX1	71	50.794	WBGene00019678	K12H4.3	81	47.203	Caenorhabditis_elegans
ENSBTAG00000019211	BRIX1	100	92.351	ENSCJAG00000018506	-	100	92.351	Callithrix_jacchus
ENSBTAG00000019211	BRIX1	100	90.368	ENSCJAG00000007390	-	100	90.368	Callithrix_jacchus
ENSBTAG00000019211	BRIX1	100	89.802	ENSCAFG00000018797	BRIX1	100	89.802	Canis_familiaris
ENSBTAG00000019211	BRIX1	100	83.569	ENSCAFG00020016783	BRIX1	100	83.569	Canis_lupus_dingo
ENSBTAG00000019211	BRIX1	100	95.184	ENSCHIG00000015024	BRIX1	100	95.184	Capra_hircus
ENSBTAG00000019211	BRIX1	100	90.652	ENSTSYG00000002898	BRIX1	100	90.652	Carlito_syrichta
ENSBTAG00000019211	BRIX1	85	77.667	ENSCAPG00000009776	BRIX1	100	77.667	Cavia_aperea
ENSBTAG00000019211	BRIX1	94	90.663	ENSCPOG00000022064	BRIX1	100	88.385	Cavia_porcellus
ENSBTAG00000019211	BRIX1	100	92.918	ENSCCAG00000033405	BRIX1	100	92.918	Cebus_capucinus
ENSBTAG00000019211	BRIX1	99	94.286	ENSCATG00000037721	BRIX1	99	94.286	Cercocebus_atys
ENSBTAG00000019211	BRIX1	99	90.598	ENSCLAG00000008124	BRIX1	99	90.598	Chinchilla_lanigera
ENSBTAG00000019211	BRIX1	100	93.768	ENSCSAG00000017117	BRIX1	100	93.768	Chlorocebus_sabaeus
ENSBTAG00000019211	BRIX1	99	75.358	ENSCHOG00000012227	-	100	75.358	Choloepus_hoffmanni
ENSBTAG00000019211	BRIX1	100	91.501	ENSCHOG00000001790	-	100	91.501	Choloepus_hoffmanni
ENSBTAG00000019211	BRIX1	99	75.287	ENSCPBG00000021309	BRIX1	98	77.586	Chrysemys_picta_bellii
ENSBTAG00000019211	BRIX1	73	56.371	ENSCING00000001695	-	97	56.371	Ciona_intestinalis
ENSBTAG00000019211	BRIX1	86	52.614	ENSCSAVG00000008644	-	97	52.614	Ciona_savignyi
ENSBTAG00000019211	BRIX1	99	94.571	ENSCANG00000022969	BRIX1	98	94.571	Colobus_angolensis_palliatus
ENSBTAG00000019211	BRIX1	100	90.935	ENSCGRG00001007932	Brix1	100	90.935	Cricetulus_griseus_chok1gshd
ENSBTAG00000019211	BRIX1	100	90.935	ENSCGRG00000016743	Brix1	100	90.935	Cricetulus_griseus_crigri
ENSBTAG00000019211	BRIX1	97	71.304	ENSCSEG00000019821	bxdc2	99	71.304	Cynoglossus_semilaevis
ENSBTAG00000019211	BRIX1	97	70.845	ENSCVAG00000016942	bxdc2	98	70.845	Cyprinodon_variegatus
ENSBTAG00000019211	BRIX1	82	71.724	ENSDARG00000098935	bxdc2	80	69.649	Danio_rerio
ENSBTAG00000019211	BRIX1	100	91.785	ENSDNOG00000002878	BRIX1	100	91.785	Dasypus_novemcinctus
ENSBTAG00000019211	BRIX1	100	89.802	ENSDORG00000009369	Brix1	100	89.802	Dipodomys_ordii
ENSBTAG00000019211	BRIX1	66	62.288	FBgn0035524	CG11583	66	62.288	Drosophila_melanogaster
ENSBTAG00000019211	BRIX1	100	82.436	ENSETEG00000017329	-	100	82.436	Echinops_telfairi
ENSBTAG00000019211	BRIX1	98	84.348	ENSETEG00000017842	-	99	84.348	Echinops_telfairi
ENSBTAG00000019211	BRIX1	72	73.622	ENSEBUG00000007717	BRIX1	81	72.308	Eptatretus_burgeri
ENSBTAG00000019211	BRIX1	100	94.051	ENSEASG00005014968	BRIX1	100	94.051	Equus_asinus_asinus
ENSBTAG00000019211	BRIX1	100	94.051	ENSECAG00000000377	BRIX1	92	94.051	Equus_caballus
ENSBTAG00000019211	BRIX1	100	82.720	ENSEEUG00000008350	BRIX1	100	82.720	Erinaceus_europaeus
ENSBTAG00000019211	BRIX1	98	71.098	ENSELUG00000009050	bxdc2	95	71.098	Esox_lucius
ENSBTAG00000019211	BRIX1	100	94.334	ENSFCAG00000042465	BRIX1	100	94.334	Felis_catus
ENSBTAG00000019211	BRIX1	94	74.556	ENSFALG00000002106	BRIX1	98	72.346	Ficedula_albicollis
ENSBTAG00000019211	BRIX1	100	91.785	ENSFDAG00000018960	BRIX1	100	91.785	Fukomys_damarensis
ENSBTAG00000019211	BRIX1	97	72.595	ENSFHEG00000004488	bxdc2	98	72.595	Fundulus_heteroclitus
ENSBTAG00000019211	BRIX1	81	77.083	ENSGMOG00000002425	bxdc2	99	77.083	Gadus_morhua
ENSBTAG00000019211	BRIX1	95	78.144	ENSGALG00000003373	BRIX1	99	76.657	Gallus_gallus
ENSBTAG00000019211	BRIX1	92	72.308	ENSGAFG00000011947	bxdc2	98	71.137	Gambusia_affinis
ENSBTAG00000019211	BRIX1	83	75.251	ENSGACG00000016491	bxdc2	100	69.714	Gasterosteus_aculeatus
ENSBTAG00000019211	BRIX1	92	80.308	ENSGAGG00000011959	BRIX1	99	78.223	Gopherus_agassizii
ENSBTAG00000019211	BRIX1	100	93.768	ENSGGOG00000004225	BRIX1	100	93.768	Gorilla_gorilla
ENSBTAG00000019211	BRIX1	97	72.886	ENSHBUG00000017923	bxdc2	98	72.886	Haplochromis_burtoni
ENSBTAG00000019211	BRIX1	100	72.521	ENSHGLG00000000296	-	100	72.521	Heterocephalus_glaber_female
ENSBTAG00000019211	BRIX1	97	74.128	ENSHGLG00000017782	-	99	74.128	Heterocephalus_glaber_female
ENSBTAG00000019211	BRIX1	100	91.785	ENSHGLG00000004566	BRIX1	100	91.785	Heterocephalus_glaber_female
ENSBTAG00000019211	BRIX1	100	69.972	ENSHGLG00000010349	-	100	69.972	Heterocephalus_glaber_female
ENSBTAG00000019211	BRIX1	100	71.671	ENSHGLG00000002055	-	100	71.671	Heterocephalus_glaber_female
ENSBTAG00000019211	BRIX1	100	91.785	ENSHGLG00100002204	-	100	91.785	Heterocephalus_glaber_male
ENSBTAG00000019211	BRIX1	93	76.220	ENSHGLG00100000909	-	81	75.000	Heterocephalus_glaber_male
ENSBTAG00000019211	BRIX1	100	70.822	ENSHGLG00100001527	-	100	70.822	Heterocephalus_glaber_male
ENSBTAG00000019211	BRIX1	99	82.670	ENSHGLG00100000068	-	97	82.670	Heterocephalus_glaber_male
ENSBTAG00000019211	BRIX1	97	71.594	ENSHCOG00000011674	bxdc2	98	71.594	Hippocampus_comes
ENSBTAG00000019211	BRIX1	94	69.069	ENSIPUG00000015099	brix1	95	69.069	Ictalurus_punctatus
ENSBTAG00000019211	BRIX1	100	92.068	ENSSTOG00000009600	BRIX1	100	92.068	Ictidomys_tridecemlineatus
ENSBTAG00000019211	BRIX1	98	79.310	ENSJJAG00000009708	-	99	79.310	Jaculus_jaculus
ENSBTAG00000019211	BRIX1	100	83.569	ENSJJAG00000004662	-	100	83.569	Jaculus_jaculus
ENSBTAG00000019211	BRIX1	75	92.395	ENSJJAG00000001806	-	100	92.395	Jaculus_jaculus
ENSBTAG00000019211	BRIX1	100	85.552	ENSJJAG00000001423	-	100	85.552	Jaculus_jaculus
ENSBTAG00000019211	BRIX1	97	72.595	ENSKMAG00000014487	bxdc2	98	72.595	Kryptolebias_marmoratus
ENSBTAG00000019211	BRIX1	97	67.930	ENSLBEG00000018123	bxdc2	99	68.222	Labrus_bergylta
ENSBTAG00000019211	BRIX1	98	72.832	ENSLACG00000005971	BRIX1	99	72.832	Latimeria_chalumnae
ENSBTAG00000019211	BRIX1	97	68.986	ENSLOCG00000011774	bxdc2	99	69.942	Lepisosteus_oculatus
ENSBTAG00000019211	BRIX1	100	92.068	ENSLAFG00000007249	BRIX1	100	92.068	Loxodonta_africana
ENSBTAG00000019211	BRIX1	100	94.051	ENSMFAG00000033107	BRIX1	100	94.051	Macaca_fascicularis
ENSBTAG00000019211	BRIX1	100	94.051	ENSMMUG00000038794	BRIX1	100	94.051	Macaca_mulatta
ENSBTAG00000019211	BRIX1	100	93.484	ENSMNEG00000039324	BRIX1	100	93.484	Macaca_nemestrina
ENSBTAG00000019211	BRIX1	100	94.051	ENSMLEG00000041564	BRIX1	100	94.051	Mandrillus_leucophaeus
ENSBTAG00000019211	BRIX1	98	72.832	ENSMAMG00000015004	bxdc2	99	73.851	Mastacembelus_armatus
ENSBTAG00000019211	BRIX1	97	72.886	ENSMZEG00005019808	bxdc2	98	72.886	Maylandia_zebra
ENSBTAG00000019211	BRIX1	56	79.365	ENSMGAG00000003156	BRIX1	98	76.733	Meleagris_gallopavo
ENSBTAG00000019211	BRIX1	85	95.667	ENSMAUG00000014172	Brix1	100	95.667	Mesocricetus_auratus
ENSBTAG00000019211	BRIX1	100	91.218	ENSMICG00000005672	BRIX1	100	91.218	Microcebus_murinus
ENSBTAG00000019211	BRIX1	100	90.935	ENSMOCG00000018798	Brix1	100	90.935	Microtus_ochrogaster
ENSBTAG00000019211	BRIX1	87	77.955	ENSMMOG00000000861	bxdc2	99	74.277	Mola_mola
ENSBTAG00000019211	BRIX1	98	82.709	ENSMODG00000020386	BRIX1	98	82.709	Monodelphis_domestica
ENSBTAG00000019211	BRIX1	97	66.763	ENSMALG00000020437	bxdc2	98	66.763	Monopterus_albus
ENSBTAG00000019211	BRIX1	100	92.351	MGP_CAROLIEiJ_G0019665	Brix1	100	92.351	Mus_caroli
ENSBTAG00000019211	BRIX1	100	93.201	ENSMUSG00000022247	Brix1	100	93.201	Mus_musculus
ENSBTAG00000019211	BRIX1	100	93.201	MGP_SPRETEiJ_G0020562	Brix1	100	93.201	Mus_spretus
ENSBTAG00000019211	BRIX1	100	93.768	ENSMPUG00000015137	BRIX1	100	93.768	Mustela_putorius_furo
ENSBTAG00000019211	BRIX1	75	92.803	ENSMLUG00000029255	BRIX1	100	92.803	Myotis_lucifugus
ENSBTAG00000019211	BRIX1	100	91.501	ENSNGAG00000021812	-	100	91.501	Nannospalax_galili
ENSBTAG00000019211	BRIX1	98	91.040	ENSNGAG00000002585	-	100	91.040	Nannospalax_galili
ENSBTAG00000019211	BRIX1	97	72.595	ENSNBRG00000008850	bxdc2	93	72.595	Neolamprologus_brichardi
ENSBTAG00000019211	BRIX1	100	89.235	ENSNLEG00000032149	BRIX1	100	89.235	Nomascus_leucogenys
ENSBTAG00000019211	BRIX1	98	68.012	ENSMEUG00000016482	BRIX1	98	68.588	Notamacropus_eugenii
ENSBTAG00000019211	BRIX1	57	96.020	ENSOPRG00000012886	BRIX1	100	96.020	Ochotona_princeps
ENSBTAG00000019211	BRIX1	100	75.493	ENSODEG00000010997	-	100	76.056	Octodon_degus
ENSBTAG00000019211	BRIX1	100	61.190	ENSODEG00000002389	-	100	61.756	Octodon_degus
ENSBTAG00000019211	BRIX1	83	89.726	ENSODEG00000019171	-	100	89.726	Octodon_degus
ENSBTAG00000019211	BRIX1	97	73.178	ENSONIG00000007725	bxdc2	96	73.178	Oreochromis_niloticus
ENSBTAG00000019211	BRIX1	83	85.324	ENSOANG00000014525	-	98	85.324	Ornithorhynchus_anatinus
ENSBTAG00000019211	BRIX1	100	91.785	ENSOCUG00000014478	BRIX1	100	91.785	Oryctolagus_cuniculus
ENSBTAG00000019211	BRIX1	99	71.552	ENSORLG00000005895	bxdc2	99	71.552	Oryzias_latipes
ENSBTAG00000019211	BRIX1	99	71.552	ENSORLG00020005201	bxdc2	99	71.552	Oryzias_latipes_hni
ENSBTAG00000019211	BRIX1	99	71.264	ENSORLG00015011685	bxdc2	99	71.264	Oryzias_latipes_hsok
ENSBTAG00000019211	BRIX1	99	71.143	ENSOMEG00000007680	bxdc2	99	71.143	Oryzias_melastigma
ENSBTAG00000019211	BRIX1	100	90.652	ENSOGAG00000014827	BRIX1	100	90.652	Otolemur_garnettii
ENSBTAG00000019211	BRIX1	100	99.150	ENSOARG00000011539	BRIX1	100	99.150	Ovis_aries
ENSBTAG00000019211	BRIX1	100	94.051	ENSPPAG00000038183	BRIX1	100	94.051	Pan_paniscus
ENSBTAG00000019211	BRIX1	100	94.051	ENSPPRG00000023961	BRIX1	100	94.051	Panthera_pardus
ENSBTAG00000019211	BRIX1	100	94.334	ENSPTIG00000006466	BRIX1	100	94.334	Panthera_tigris_altaica
ENSBTAG00000019211	BRIX1	100	94.051	ENSPTRG00000016784	BRIX1	100	94.051	Pan_troglodytes
ENSBTAG00000019211	BRIX1	99	94.000	ENSPANG00000016504	BRIX1	98	94.000	Papio_anubis
ENSBTAG00000019211	BRIX1	90	74.224	ENSPKIG00000005920	bxdc2	85	71.429	Paramormyrops_kingsleyae
ENSBTAG00000019211	BRIX1	77	81.919	ENSPSIG00000011219	BRIX1	99	81.919	Pelodiscus_sinensis
ENSBTAG00000019211	BRIX1	97	65.015	ENSPMGG00000022988	bxdc2	98	65.306	Periophthalmus_magnuspinnatus
ENSBTAG00000019211	BRIX1	100	91.501	ENSPEMG00000016920	Brix1	100	91.501	Peromyscus_maniculatus_bairdii
ENSBTAG00000019211	BRIX1	98	81.844	ENSPCIG00000022778	BRIX1	98	82.421	Phascolarctos_cinereus
ENSBTAG00000019211	BRIX1	97	70.554	ENSPFOG00000008577	bxdc2	81	71.137	Poecilia_formosa
ENSBTAG00000019211	BRIX1	97	70.554	ENSPLAG00000006772	bxdc2	90	71.137	Poecilia_latipinna
ENSBTAG00000019211	BRIX1	97	70.554	ENSPMEG00000020229	bxdc2	90	71.137	Poecilia_mexicana
ENSBTAG00000019211	BRIX1	96	69.628	ENSPREG00000017461	bxdc2	90	71.720	Poecilia_reticulata
ENSBTAG00000019211	BRIX1	100	90.085	ENSPPYG00000015390	BRIX1	100	90.085	Pongo_abelii
ENSBTAG00000019211	BRIX1	53	87.701	ENSPCAG00000005158	-	100	87.701	Procavia_capensis
ENSBTAG00000019211	BRIX1	93	69.605	ENSPCOG00000016748	-	96	67.742	Propithecus_coquereli
ENSBTAG00000019211	BRIX1	100	91.785	ENSPCOG00000018281	-	100	91.785	Propithecus_coquereli
ENSBTAG00000019211	BRIX1	85	93.000	ENSPVAG00000016925	BRIX1	100	93.000	Pteropus_vampyrus
ENSBTAG00000019211	BRIX1	97	72.886	ENSPNYG00000007707	bxdc2	98	72.886	Pundamilia_nyererei
ENSBTAG00000019211	BRIX1	92	70.769	ENSPNAG00000010431	bxdc2	96	69.048	Pygocentrus_nattereri
ENSBTAG00000019211	BRIX1	100	92.918	ENSRNOG00000018021	Brix1	100	92.918	Rattus_norvegicus
ENSBTAG00000019211	BRIX1	99	94.571	ENSRBIG00000042083	BRIX1	98	94.571	Rhinopithecus_bieti
ENSBTAG00000019211	BRIX1	99	94.857	ENSRROG00000031228	BRIX1	98	94.857	Rhinopithecus_roxellana
ENSBTAG00000019211	BRIX1	71	47.909	YOL077C	-	90	47.909	Saccharomyces_cerevisiae
ENSBTAG00000019211	BRIX1	100	92.918	ENSSBOG00000033290	-	100	92.918	Saimiri_boliviensis_boliviensis
ENSBTAG00000019211	BRIX1	100	91.218	ENSSBOG00000017845	-	100	91.218	Saimiri_boliviensis_boliviensis
ENSBTAG00000019211	BRIX1	98	81.844	ENSSHAG00000010794	BRIX1	98	81.844	Sarcophilus_harrisii
ENSBTAG00000019211	BRIX1	92	71.692	ENSSFOG00015022435	brix1	99	68.966	Scleropages_formosus
ENSBTAG00000019211	BRIX1	97	71.014	ENSSMAG00000005909	bxdc2	99	71.221	Scophthalmus_maximus
ENSBTAG00000019211	BRIX1	97	74.344	ENSSDUG00000016234	bxdc2	98	74.636	Seriola_dumerili
ENSBTAG00000019211	BRIX1	97	74.052	ENSSLDG00000007044	bxdc2	98	74.344	Seriola_lalandi_dorsalis
ENSBTAG00000019211	BRIX1	100	87.187	ENSSARG00000009879	BRIX1	100	87.744	Sorex_araneus
ENSBTAG00000019211	BRIX1	85	80.667	ENSSPUG00000019166	-	100	80.667	Sphenodon_punctatus
ENSBTAG00000019211	BRIX1	99	71.388	ENSSPUG00000000011	-	99	71.388	Sphenodon_punctatus
ENSBTAG00000019211	BRIX1	97	72.965	ENSSPAG00000006309	bxdc2	98	73.761	Stegastes_partitus
ENSBTAG00000019211	BRIX1	100	95.467	ENSSSCG00000016827	BRIX1	99	95.467	Sus_scrofa
ENSBTAG00000019211	BRIX1	95	76.048	ENSTGUG00000001961	BRIX1	99	74.640	Taeniopygia_guttata
ENSBTAG00000019211	BRIX1	97	72.126	ENSTRUG00000011403	bxdc2	99	72.126	Takifugu_rubripes
ENSBTAG00000019211	BRIX1	92	74.390	ENSTNIG00000007517	bxdc2	99	71.549	Tetraodon_nigroviridis
ENSBTAG00000019211	BRIX1	85	90.667	ENSTBEG00000011652	BRIX1	100	90.667	Tupaia_belangeri
ENSBTAG00000019211	BRIX1	100	94.901	ENSTTRG00000003262	BRIX1	100	94.901	Tursiops_truncatus
ENSBTAG00000019211	BRIX1	100	81.180	ENSUAMG00000022481	BRIX1	100	81.356	Ursus_americanus
ENSBTAG00000019211	BRIX1	100	94.334	ENSUMAG00000012900	BRIX1	100	94.334	Ursus_maritimus
ENSBTAG00000019211	BRIX1	63	94.118	ENSVPAG00000010128	BRIX1	63	94.118	Vicugna_pacos
ENSBTAG00000019211	BRIX1	100	85.552	ENSVVUG00000022099	BRIX1	100	85.552	Vulpes_vulpes
ENSBTAG00000019211	BRIX1	98	74.352	ENSXETG00000000703	brix1	100	74.352	Xenopus_tropicalis
ENSBTAG00000019211	BRIX1	97	72.303	ENSXCOG00000002461	bxdc2	98	72.303	Xiphophorus_couchianus
ENSBTAG00000019211	BRIX1	97	72.012	ENSXMAG00000004284	bxdc2	85	72.012	Xiphophorus_maculatus