EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000019215 (Gene tree)
Gene ID: 100138748
Gene Symbol: THOC1
Alias: -
Full Name: Bos taurus THO complex 1 (THOC1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 38681 bases
Position: chr24:35184721-35223401
Accession: NM_001205480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000025584	efThoc1	PF11957.8	5.6e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000025584	-	3809	-	ENSBTAP00000025584	657 (aa)	-	F1MJV3

Gene Model

Click here to download ENSBTAG00000019215's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03013	RNA transport	KEGG
bta03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000019215's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000019215	THOC1	100	97.565	ENSG00000079134	THOC1	100	97.565	Homo_sapiens
ENSBTAG00000019215	THOC1	100	97.869	ENSAMEG00000006645	THOC1	99	97.869	Ailuropoda_melanoleuca
ENSBTAG00000019215	THOC1	97	70.110	ENSACIG00000019392	thoc1	99	69.337	Amphilophus_citrinellus
ENSBTAG00000019215	THOC1	98	70.000	ENSAOCG00000008391	thoc1	99	70.000	Amphiprion_ocellaris
ENSBTAG00000019215	THOC1	98	73.620	ENSAPEG00000001093	thoc1	99	73.620	Amphiprion_percula
ENSBTAG00000019215	THOC1	98	73.425	ENSATEG00000004783	thoc1	99	73.425	Anabas_testudineus
ENSBTAG00000019215	THOC1	98	89.043	ENSAPLG00000016149	THOC1	98	89.043	Anas_platyrhynchos
ENSBTAG00000019215	THOC1	100	88.939	ENSACAG00000008307	THOC1	98	87.557	Anolis_carolinensis
ENSBTAG00000019215	THOC1	100	96.837	ENSANAG00000033200	THOC1	100	96.837	Aotus_nancymaae
ENSBTAG00000019215	THOC1	98	72.853	ENSACLG00000016836	thoc1	99	72.853	Astatotilapia_calliptera
ENSBTAG00000019215	THOC1	93	71.337	ENSAMXG00000014708	thoc1	97	71.337	Astyanax_mexicanus
ENSBTAG00000019215	THOC1	71	35.000	WBGene00020172	thoc-1	69	35.881	Caenorhabditis_elegans
ENSBTAG00000019215	THOC1	100	97.869	ENSCJAG00000020450	THOC1	100	97.869	Callithrix_jacchus
ENSBTAG00000019215	THOC1	100	98.021	ENSCAFG00000018324	THOC1	100	98.021	Canis_familiaris
ENSBTAG00000019215	THOC1	100	98.021	ENSCAFG00020017894	THOC1	100	98.021	Canis_lupus_dingo
ENSBTAG00000019215	THOC1	100	100.000	ENSCHIG00000015399	THOC1	100	100.000	Capra_hircus
ENSBTAG00000019215	THOC1	100	97.717	ENSTSYG00000010585	THOC1	99	97.717	Carlito_syrichta
ENSBTAG00000019215	THOC1	97	71.495	ENSCAPG00000016270	THOC1	98	71.495	Cavia_aperea
ENSBTAG00000019215	THOC1	100	95.434	ENSCPOG00000000959	THOC1	100	95.434	Cavia_porcellus
ENSBTAG00000019215	THOC1	100	98.021	ENSCCAG00000025766	THOC1	100	98.021	Cebus_capucinus
ENSBTAG00000019215	THOC1	100	94.521	ENSCATG00000028180	THOC1	99	96.348	Cercocebus_atys
ENSBTAG00000019215	THOC1	97	96.244	ENSCLAG00000009117	THOC1	100	96.244	Chinchilla_lanigera
ENSBTAG00000019215	THOC1	100	98.021	ENSCSAG00000017631	THOC1	100	98.021	Chlorocebus_sabaeus
ENSBTAG00000019215	THOC1	89	85.252	ENSCHOG00000010609	THOC1	89	85.252	Choloepus_hoffmanni
ENSBTAG00000019215	THOC1	99	92.672	ENSCPBG00000027558	THOC1	99	92.672	Chrysemys_picta_bellii
ENSBTAG00000019215	THOC1	74	48.406	ENSCING00000007663	-	99	48.785	Ciona_intestinalis
ENSBTAG00000019215	THOC1	93	47.452	ENSCSAVG00000010649	-	99	46.656	Ciona_savignyi
ENSBTAG00000019215	THOC1	100	97.869	ENSCANG00000034265	THOC1	100	97.869	Colobus_angolensis_palliatus
ENSBTAG00000019215	THOC1	100	95.890	ENSCGRG00001016464	Thoc1	99	95.890	Cricetulus_griseus_chok1gshd
ENSBTAG00000019215	THOC1	98	95.504	ENSCGRG00000010269	-	100	95.931	Cricetulus_griseus_crigri
ENSBTAG00000019215	THOC1	90	78.716	ENSCGRG00000003390	-	99	78.716	Cricetulus_griseus_crigri
ENSBTAG00000019215	THOC1	98	71.842	ENSCSEG00000012486	thoc1	99	73.473	Cynoglossus_semilaevis
ENSBTAG00000019215	THOC1	98	72.239	ENSCVAG00000020600	thoc1	99	72.239	Cyprinodon_variegatus
ENSBTAG00000019215	THOC1	99	74.962	ENSDARG00000088246	thoc1	99	74.962	Danio_rerio
ENSBTAG00000019215	THOC1	100	98.174	ENSDNOG00000019217	THOC1	100	98.174	Dasypus_novemcinctus
ENSBTAG00000019215	THOC1	99	90.137	ENSDORG00000008060	Thoc1	99	91.862	Dipodomys_ordii
ENSBTAG00000019215	THOC1	97	36.455	FBgn0037382	Hpr1	74	41.682	Drosophila_melanogaster
ENSBTAG00000019215	THOC1	91	75.503	ENSETEG00000004165	THOC1	100	75.503	Echinops_telfairi
ENSBTAG00000019215	THOC1	92	64.286	ENSEBUG00000005998	thoc1	98	65.615	Eptatretus_burgeri
ENSBTAG00000019215	THOC1	100	97.869	ENSEASG00005002549	THOC1	96	97.869	Equus_asinus_asinus
ENSBTAG00000019215	THOC1	100	98.326	ENSECAG00000009267	THOC1	90	98.326	Equus_caballus
ENSBTAG00000019215	THOC1	80	80.000	ENSEEUG00000012214	-	82	80.000	Erinaceus_europaeus
ENSBTAG00000019215	THOC1	99	73.112	ENSELUG00000023277	thoc1	100	73.112	Esox_lucius
ENSBTAG00000019215	THOC1	100	97.869	ENSFCAG00000022454	THOC1	87	97.869	Felis_catus
ENSBTAG00000019215	THOC1	97	90.824	ENSFALG00000006205	THOC1	99	90.824	Ficedula_albicollis
ENSBTAG00000019215	THOC1	98	96.754	ENSFDAG00000006842	THOC1	100	96.754	Fukomys_damarensis
ENSBTAG00000019215	THOC1	98	71.933	ENSFHEG00000008841	thoc1	99	71.933	Fundulus_heteroclitus
ENSBTAG00000019215	THOC1	99	72.519	ENSGMOG00000011486	thoc1	99	72.519	Gadus_morhua
ENSBTAG00000019215	THOC1	99	90.076	ENSGALG00000014915	THOC1	98	90.076	Gallus_gallus
ENSBTAG00000019215	THOC1	98	72.239	ENSGAFG00000021464	thoc1	99	72.239	Gambusia_affinis
ENSBTAG00000019215	THOC1	99	72.561	ENSGACG00000017361	thoc1	99	73.190	Gasterosteus_aculeatus
ENSBTAG00000019215	THOC1	99	92.366	ENSGAGG00000021230	-	98	92.366	Gopherus_agassizii
ENSBTAG00000019215	THOC1	100	97.717	ENSGGOG00000003013	THOC1	99	97.717	Gorilla_gorilla
ENSBTAG00000019215	THOC1	98	72.853	ENSHBUG00000009096	thoc1	99	72.853	Haplochromis_burtoni
ENSBTAG00000019215	THOC1	100	95.890	ENSHGLG00000003712	-	100	95.890	Heterocephalus_glaber_female
ENSBTAG00000019215	THOC1	78	90.155	ENSHGLG00000009264	-	99	90.155	Heterocephalus_glaber_female
ENSBTAG00000019215	THOC1	100	96.195	ENSHGLG00100003570	THOC1	100	96.195	Heterocephalus_glaber_male
ENSBTAG00000019215	THOC1	77	88.601	ENSHGLG00100002225	-	99	88.601	Heterocephalus_glaber_male
ENSBTAG00000019215	THOC1	91	73.458	ENSIPUG00000005306	thoc1	99	73.271	Ictalurus_punctatus
ENSBTAG00000019215	THOC1	100	97.412	ENSSTOG00000006484	THOC1	100	97.412	Ictidomys_tridecemlineatus
ENSBTAG00000019215	THOC1	52	94.706	ENSJJAG00000014893	-	96	94.706	Jaculus_jaculus
ENSBTAG00000019215	THOC1	99	72.298	ENSKMAG00000003904	thoc1	99	72.298	Kryptolebias_marmoratus
ENSBTAG00000019215	THOC1	99	73.435	ENSLBEG00000020372	thoc1	98	73.435	Labrus_bergylta
ENSBTAG00000019215	THOC1	99	80.030	ENSLACG00000014869	THOC1	99	79.084	Latimeria_chalumnae
ENSBTAG00000019215	THOC1	98	77.642	ENSLOCG00000002097	thoc1	99	76.994	Lepisosteus_oculatus
ENSBTAG00000019215	THOC1	100	97.717	ENSLAFG00000009585	THOC1	100	97.717	Loxodonta_africana
ENSBTAG00000019215	THOC1	100	98.021	ENSMFAG00000041520	THOC1	99	98.021	Macaca_fascicularis
ENSBTAG00000019215	THOC1	100	98.021	ENSMMUG00000004662	THOC1	100	98.021	Macaca_mulatta
ENSBTAG00000019215	THOC1	100	98.021	ENSMNEG00000040177	THOC1	99	98.021	Macaca_nemestrina
ENSBTAG00000019215	THOC1	100	98.021	ENSMLEG00000034201	THOC1	99	98.021	Mandrillus_leucophaeus
ENSBTAG00000019215	THOC1	94	73.955	ENSMAMG00000016747	thoc1	99	73.955	Mastacembelus_armatus
ENSBTAG00000019215	THOC1	98	72.853	ENSMZEG00005024609	thoc1	99	72.853	Maylandia_zebra
ENSBTAG00000019215	THOC1	97	89.875	ENSMGAG00000009811	THOC1	100	89.875	Meleagris_gallopavo
ENSBTAG00000019215	THOC1	100	95.890	ENSMAUG00000010272	Thoc1	99	95.890	Mesocricetus_auratus
ENSBTAG00000019215	THOC1	100	98.021	ENSMICG00000027200	THOC1	100	98.021	Microcebus_murinus
ENSBTAG00000019215	THOC1	99	94.665	ENSMOCG00000014536	-	86	94.665	Microtus_ochrogaster
ENSBTAG00000019215	THOC1	99	83.511	ENSMOCG00000014924	-	96	83.511	Microtus_ochrogaster
ENSBTAG00000019215	THOC1	92	73.203	ENSMMOG00000011772	thoc1	100	73.203	Mola_mola
ENSBTAG00000019215	THOC1	100	93.534	ENSMODG00000021482	THOC1	100	93.534	Monodelphis_domestica
ENSBTAG00000019215	THOC1	98	73.579	ENSMALG00000021872	thoc1	99	73.579	Monopterus_albus
ENSBTAG00000019215	THOC1	100	96.195	MGP_CAROLIEiJ_G0021989	Thoc1	100	96.195	Mus_caroli
ENSBTAG00000019215	THOC1	100	96.347	ENSMUSG00000024287	Thoc1	100	97.872	Mus_musculus
ENSBTAG00000019215	THOC1	100	96.347	MGP_PahariEiJ_G0018726	Thoc1	100	96.347	Mus_pahari
ENSBTAG00000019215	THOC1	100	96.195	MGP_SPRETEiJ_G0022905	Thoc1	100	96.195	Mus_spretus
ENSBTAG00000019215	THOC1	100	97.717	ENSMPUG00000005448	THOC1	100	97.717	Mustela_putorius_furo
ENSBTAG00000019215	THOC1	90	84.486	ENSMLUG00000027965	-	99	84.317	Myotis_lucifugus
ENSBTAG00000019215	THOC1	60	84.635	ENSMLUG00000024912	-	100	84.635	Myotis_lucifugus
ENSBTAG00000019215	THOC1	100	97.264	ENSMLUG00000004090	-	100	97.264	Myotis_lucifugus
ENSBTAG00000019215	THOC1	100	97.412	ENSNGAG00000001401	-	100	97.412	Nannospalax_galili
ENSBTAG00000019215	THOC1	99	75.688	ENSNGAG00000008061	-	99	76.507	Nannospalax_galili
ENSBTAG00000019215	THOC1	97	72.926	ENSNBRG00000005991	thoc1	98	72.926	Neolamprologus_brichardi
ENSBTAG00000019215	THOC1	100	98.021	ENSNLEG00000006835	THOC1	100	98.021	Nomascus_leucogenys
ENSBTAG00000019215	THOC1	97	81.847	ENSMEUG00000009756	THOC1	99	81.847	Notamacropus_eugenii
ENSBTAG00000019215	THOC1	100	77.930	ENSOPRG00000001108	THOC1	100	77.930	Ochotona_princeps
ENSBTAG00000019215	THOC1	100	90.259	ENSODEG00000006623	THOC1	100	90.259	Octodon_degus
ENSBTAG00000019215	THOC1	99	72.534	ENSONIG00000009440	thoc1	99	72.534	Oreochromis_niloticus
ENSBTAG00000019215	THOC1	100	97.717	ENSOCUG00000011601	THOC1	100	97.717	Oryctolagus_cuniculus
ENSBTAG00000019215	THOC1	98	72.393	ENSORLG00000017629	thoc1	99	72.393	Oryzias_latipes
ENSBTAG00000019215	THOC1	98	72.393	ENSORLG00020007567	thoc1	99	72.393	Oryzias_latipes_hni
ENSBTAG00000019215	THOC1	98	72.546	ENSORLG00015007356	thoc1	99	72.546	Oryzias_latipes_hsok
ENSBTAG00000019215	THOC1	98	71.012	ENSOMEG00000008200	thoc1	99	71.779	Oryzias_melastigma
ENSBTAG00000019215	THOC1	100	94.673	ENSOGAG00000000470	THOC1	99	94.673	Otolemur_garnettii
ENSBTAG00000019215	THOC1	99	98.323	ENSOARG00000009238	THOC1	99	98.323	Ovis_aries
ENSBTAG00000019215	THOC1	100	97.717	ENSPPAG00000031812	THOC1	99	97.717	Pan_paniscus
ENSBTAG00000019215	THOC1	100	97.565	ENSPPRG00000023794	THOC1	100	97.565	Panthera_pardus
ENSBTAG00000019215	THOC1	100	97.565	ENSPTIG00000007469	THOC1	100	97.565	Panthera_tigris_altaica
ENSBTAG00000019215	THOC1	100	96.837	ENSPTRG00000009816	THOC1	100	96.837	Pan_troglodytes
ENSBTAG00000019215	THOC1	100	96.974	ENSPANG00000008665	THOC1	100	96.974	Papio_anubis
ENSBTAG00000019215	THOC1	99	73.089	ENSPKIG00000005906	thoc1	99	73.853	Paramormyrops_kingsleyae
ENSBTAG00000019215	THOC1	81	93.809	ENSPSIG00000007691	THOC1	98	93.809	Pelodiscus_sinensis
ENSBTAG00000019215	THOC1	93	73.906	ENSPMGG00000008279	thoc1	95	73.906	Periophthalmus_magnuspinnatus
ENSBTAG00000019215	THOC1	100	96.347	ENSPEMG00000021789	Thoc1	100	96.347	Peromyscus_maniculatus_bairdii
ENSBTAG00000019215	THOC1	74	93.725	ENSPCIG00000026942	THOC1	98	93.725	Phascolarctos_cinereus
ENSBTAG00000019215	THOC1	98	72.504	ENSPFOG00000011673	thoc1	99	72.504	Poecilia_formosa
ENSBTAG00000019215	THOC1	98	72.393	ENSPLAG00000019648	thoc1	99	72.393	Poecilia_latipinna
ENSBTAG00000019215	THOC1	98	72.504	ENSPMEG00000007083	thoc1	99	72.504	Poecilia_mexicana
ENSBTAG00000019215	THOC1	98	72.239	ENSPREG00000006719	thoc1	99	72.239	Poecilia_reticulata
ENSBTAG00000019215	THOC1	74	97.741	ENSPPYG00000009049	-	99	97.741	Pongo_abelii
ENSBTAG00000019215	THOC1	100	87.823	ENSPCAG00000005320	THOC1	100	87.823	Procavia_capensis
ENSBTAG00000019215	THOC1	100	97.717	ENSPCOG00000009234	THOC1	100	97.717	Propithecus_coquereli
ENSBTAG00000019215	THOC1	100	96.195	ENSPVAG00000004007	THOC1	100	96.195	Pteropus_vampyrus
ENSBTAG00000019215	THOC1	98	72.853	ENSPNYG00000019152	thoc1	99	72.853	Pundamilia_nyererei
ENSBTAG00000019215	THOC1	98	74.769	ENSPNAG00000023390	thoc1	99	74.769	Pygocentrus_nattereri
ENSBTAG00000019215	THOC1	91	85.938	ENSRNOG00000015332	Thoc1	100	85.938	Rattus_norvegicus
ENSBTAG00000019215	THOC1	100	96.988	ENSRBIG00000033738	THOC1	100	96.988	Rhinopithecus_bieti
ENSBTAG00000019215	THOC1	100	98.021	ENSRROG00000044988	THOC1	100	98.021	Rhinopithecus_roxellana
ENSBTAG00000019215	THOC1	100	97.565	ENSSBOG00000016556	THOC1	99	97.565	Saimiri_boliviensis_boliviensis
ENSBTAG00000019215	THOC1	100	94.377	ENSSHAG00000014829	THOC1	100	94.377	Sarcophilus_harrisii
ENSBTAG00000019215	THOC1	98	75.307	ENSSFOG00015021527	thoc1	99	75.307	Scleropages_formosus
ENSBTAG00000019215	THOC1	98	70.968	ENSSMAG00000018465	thoc1	99	70.968	Scophthalmus_maximus
ENSBTAG00000019215	THOC1	98	74.040	ENSSDUG00000016810	thoc1	99	74.040	Seriola_dumerili
ENSBTAG00000019215	THOC1	98	73.733	ENSSLDG00000015555	thoc1	99	73.733	Seriola_lalandi_dorsalis
ENSBTAG00000019215	THOC1	88	97.318	ENSSARG00000006910	THOC1	88	97.318	Sorex_araneus
ENSBTAG00000019215	THOC1	98	89.907	ENSSPUG00000007238	THOC1	99	89.924	Sphenodon_punctatus
ENSBTAG00000019215	THOC1	98	70.336	ENSSPAG00000018847	thoc1	99	70.336	Stegastes_partitus
ENSBTAG00000019215	THOC1	100	98.326	ENSSSCG00000025653	THOC1	94	98.326	Sus_scrofa
ENSBTAG00000019215	THOC1	99	90.992	ENSTGUG00000010204	THOC1	99	90.992	Taeniopygia_guttata
ENSBTAG00000019215	THOC1	98	72.393	ENSTRUG00000013518	thoc1	99	72.393	Takifugu_rubripes
ENSBTAG00000019215	THOC1	98	72.546	ENSTNIG00000008473	thoc1	99	72.546	Tetraodon_nigroviridis
ENSBTAG00000019215	THOC1	100	89.650	ENSTBEG00000016920	THOC1	100	89.650	Tupaia_belangeri
ENSBTAG00000019215	THOC1	100	91.172	ENSTTRG00000016664	THOC1	100	91.172	Tursiops_truncatus
ENSBTAG00000019215	THOC1	100	97.717	ENSUAMG00000002527	THOC1	100	97.717	Ursus_americanus
ENSBTAG00000019215	THOC1	100	97.717	ENSUMAG00000019693	THOC1	100	97.717	Ursus_maritimus
ENSBTAG00000019215	THOC1	77	97.000	ENSVPAG00000003726	-	77	97.000	Vicugna_pacos
ENSBTAG00000019215	THOC1	100	98.021	ENSVVUG00000004384	THOC1	100	98.021	Vulpes_vulpes
ENSBTAG00000019215	THOC1	99	79.091	ENSXETG00000003155	thoc1	98	79.091	Xenopus_tropicalis
ENSBTAG00000019215	THOC1	93	70.540	ENSXCOG00000016085	thoc1	89	70.540	Xiphophorus_couchianus
ENSBTAG00000019215	THOC1	98	72.239	ENSXMAG00000002353	thoc1	99	72.239	Xiphophorus_maculatus