EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000019325 (Gene tree)
Gene ID: 539613
Gene Symbol: TRMT1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 10077 bases
Position: chr7:12462094-12472170
Accession: 36365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000025736	zf-CCCH	PF00642.24	0.00018	1	1
ENSBTAP00000025736	TRM	PF02005.16	2.7e-149	1	1
ENSBTAP00000025736	Met_10	PF02475.16	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000025736	-	3089	-	ENSBTAP00000025736	703 (aa)	XP_024850251	F6R277

Gene Model

Click here to download ENSBTAG00000019325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000019325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000019325	TRMT1	91	88.474	ENSG00000104907	TRMT1	100	94.241	Homo_sapiens
ENSBTAG00000019325	TRMT1	95	88.376	ENSAMEG00000012598	TRMT1	100	88.376	Ailuropoda_melanoleuca
ENSBTAG00000019325	TRMT1	86	55.698	ENSACIG00000018680	trmt1	96	55.698	Amphilophus_citrinellus
ENSBTAG00000019325	TRMT1	82	65.112	ENSAOCG00000006781	trmt1	86	65.112	Amphiprion_ocellaris
ENSBTAG00000019325	TRMT1	82	65.112	ENSAPEG00000007712	trmt1	86	65.112	Amphiprion_percula
ENSBTAG00000019325	TRMT1	82	67.241	ENSATEG00000001872	trmt1	84	67.241	Anabas_testudineus
ENSBTAG00000019325	TRMT1	87	66.393	ENSACAG00000003825	TRMT1	97	66.393	Anolis_carolinensis
ENSBTAG00000019325	TRMT1	92	82.743	ENSANAG00000023016	TRMT1	98	85.318	Aotus_nancymaae
ENSBTAG00000019325	TRMT1	85	62.852	ENSACLG00000010073	trmt1	96	62.852	Astatotilapia_calliptera
ENSBTAG00000019325	TRMT1	84	65.563	ENSAMXG00000012026	trmt1	89	65.563	Astyanax_mexicanus
ENSBTAG00000019325	TRMT1	73	40.304	WBGene00006613	trm-1	93	40.304	Caenorhabditis_elegans
ENSBTAG00000019325	TRMT1	91	83.127	ENSCJAG00000004566	TRMT1	99	83.127	Callithrix_jacchus
ENSBTAG00000019325	TRMT1	98	86.351	ENSCAFG00000017070	TRMT1	100	89.639	Canis_familiaris
ENSBTAG00000019325	TRMT1	93	87.768	ENSCAFG00020005397	TRMT1	100	84.894	Canis_lupus_dingo
ENSBTAG00000019325	TRMT1	94	97.587	ENSCHIG00000013569	TRMT1	100	97.587	Capra_hircus
ENSBTAG00000019325	TRMT1	91	81.832	ENSTSYG00000003207	TRMT1	99	81.431	Carlito_syrichta
ENSBTAG00000019325	TRMT1	79	80.357	ENSCAPG00000003355	TRMT1	97	80.357	Cavia_aperea
ENSBTAG00000019325	TRMT1	92	82.435	ENSCPOG00000011754	TRMT1	98	82.435	Cavia_porcellus
ENSBTAG00000019325	TRMT1	89	83.307	ENSCCAG00000022263	TRMT1	98	84.967	Cebus_capucinus
ENSBTAG00000019325	TRMT1	94	87.009	ENSCATG00000039850	TRMT1	100	87.009	Cercocebus_atys
ENSBTAG00000019325	TRMT1	79	73.573	ENSCATG00000038220	-	97	73.573	Cercocebus_atys
ENSBTAG00000019325	TRMT1	94	84.650	ENSCLAG00000015295	TRMT1	97	84.650	Chinchilla_lanigera
ENSBTAG00000019325	TRMT1	75	89.057	ENSCSAG00000006500	TRMT1	100	89.057	Chlorocebus_sabaeus
ENSBTAG00000019325	TRMT1	84	70.238	ENSCPBG00000023866	TRMT1	87	70.389	Chrysemys_picta_bellii
ENSBTAG00000019325	TRMT1	79	45.161	ENSCING00000002884	-	98	45.161	Ciona_intestinalis
ENSBTAG00000019325	TRMT1	78	45.144	ENSCSAVG00000010927	-	100	45.725	Ciona_savignyi
ENSBTAG00000019325	TRMT1	93	70.904	ENSCANG00000040631	TRMT1	99	70.904	Colobus_angolensis_palliatus
ENSBTAG00000019325	TRMT1	89	68.312	ENSCANG00000031650	-	98	68.175	Colobus_angolensis_palliatus
ENSBTAG00000019325	TRMT1	94	82.371	ENSCGRG00001022594	Trmt1	99	82.371	Cricetulus_griseus_chok1gshd
ENSBTAG00000019325	TRMT1	94	82.371	ENSCGRG00000017732	Trmt1	99	82.371	Cricetulus_griseus_crigri
ENSBTAG00000019325	TRMT1	86	64.145	ENSCSEG00000001643	trmt1	88	66.543	Cynoglossus_semilaevis
ENSBTAG00000019325	TRMT1	84	66.107	ENSCVAG00000011886	trmt1	88	66.107	Cyprinodon_variegatus
ENSBTAG00000019325	TRMT1	84	64.345	ENSDARG00000010978	trmt1	88	64.191	Danio_rerio
ENSBTAG00000019325	TRMT1	79	63.214	ENSDNOG00000048240	-	95	63.214	Dasypus_novemcinctus
ENSBTAG00000019325	TRMT1	93	81.611	ENSDORG00000014298	Trmt1	99	81.611	Dipodomys_ordii
ENSBTAG00000019325	TRMT1	73	47.876	FBgn0032430	CG6388	87	47.876	Drosophila_melanogaster
ENSBTAG00000019325	TRMT1	52	82.414	ENSETEG00000015483	-	55	82.414	Echinops_telfairi
ENSBTAG00000019325	TRMT1	74	53.191	ENSEBUG00000003449	trmt1	75	53.269	Eptatretus_burgeri
ENSBTAG00000019325	TRMT1	89	87.500	ENSEASG00005004050	TRMT1	100	86.970	Equus_asinus_asinus
ENSBTAG00000019325	TRMT1	89	87.821	ENSECAG00000016149	TRMT1	100	87.284	Equus_caballus
ENSBTAG00000019325	TRMT1	56	72.292	ENSEEUG00000014102	-	100	72.292	Erinaceus_europaeus
ENSBTAG00000019325	TRMT1	81	65.972	ENSELUG00000021659	trmt1	85	65.972	Esox_lucius
ENSBTAG00000019325	TRMT1	94	87.386	ENSFCAG00000000483	TRMT1	99	87.386	Felis_catus
ENSBTAG00000019325	TRMT1	94	83.030	ENSFDAG00000007386	TRMT1	99	83.030	Fukomys_damarensis
ENSBTAG00000019325	TRMT1	85	63.667	ENSFHEG00000012865	trmt1	89	67.837	Fundulus_heteroclitus
ENSBTAG00000019325	TRMT1	83	60.517	ENSGMOG00000006564	trmt1	99	61.034	Gadus_morhua
ENSBTAG00000019325	TRMT1	85	65.886	ENSGAFG00000011862	trmt1	92	66.054	Gambusia_affinis
ENSBTAG00000019325	TRMT1	83	62.564	ENSGACG00000000227	trmt1	94	63.140	Gasterosteus_aculeatus
ENSBTAG00000019325	TRMT1	89	66.563	ENSGAGG00000016432	TRMT1	93	66.563	Gopherus_agassizii
ENSBTAG00000019325	TRMT1	91	88.474	ENSGGOG00000014007	TRMT1	99	87.939	Gorilla_gorilla
ENSBTAG00000019325	TRMT1	79	58.289	ENSHBUG00000008821	trmt1	92	58.289	Haplochromis_burtoni
ENSBTAG00000019325	TRMT1	94	82.523	ENSHGLG00000015972	TRMT1	99	82.523	Heterocephalus_glaber_female
ENSBTAG00000019325	TRMT1	94	76.480	ENSHGLG00100018112	TRMT1	99	76.480	Heterocephalus_glaber_male
ENSBTAG00000019325	TRMT1	82	63.415	ENSHCOG00000009447	trmt1	88	63.415	Hippocampus_comes
ENSBTAG00000019325	TRMT1	81	65.582	ENSIPUG00000002899	trmt1	85	65.582	Ictalurus_punctatus
ENSBTAG00000019325	TRMT1	94	85.973	ENSSTOG00000012531	TRMT1	100	85.973	Ictidomys_tridecemlineatus
ENSBTAG00000019325	TRMT1	89	82.989	ENSJJAG00000017154	Trmt1	100	80.572	Jaculus_jaculus
ENSBTAG00000019325	TRMT1	84	64.924	ENSKMAG00000011809	trmt1	98	64.924	Kryptolebias_marmoratus
ENSBTAG00000019325	TRMT1	85	64.167	ENSLBEG00000012703	trmt1	87	64.167	Labrus_bergylta
ENSBTAG00000019325	TRMT1	81	57.612	ENSLACG00000014585	TRMT1	99	55.882	Latimeria_chalumnae
ENSBTAG00000019325	TRMT1	81	62.500	ENSLOCG00000006479	trmt1	97	63.103	Lepisosteus_oculatus
ENSBTAG00000019325	TRMT1	93	86.963	ENSLAFG00000014072	TRMT1	100	86.963	Loxodonta_africana
ENSBTAG00000019325	TRMT1	94	87.160	ENSMFAG00000033143	TRMT1	100	87.160	Macaca_fascicularis
ENSBTAG00000019325	TRMT1	93	80.670	ENSMMUG00000001167	TRMT1	100	80.670	Macaca_mulatta
ENSBTAG00000019325	TRMT1	94	87.311	ENSMNEG00000037867	TRMT1	100	87.311	Macaca_nemestrina
ENSBTAG00000019325	TRMT1	93	86.870	ENSMLEG00000016142	TRMT1	99	86.870	Mandrillus_leucophaeus
ENSBTAG00000019325	TRMT1	85	65.058	ENSMAMG00000004357	trmt1	89	65.058	Mastacembelus_armatus
ENSBTAG00000019325	TRMT1	86	61.774	ENSMZEG00005014510	trmt1	92	61.774	Maylandia_zebra
ENSBTAG00000019325	TRMT1	92	82.462	ENSMAUG00000011134	Trmt1	100	81.353	Mesocricetus_auratus
ENSBTAG00000019325	TRMT1	94	86.707	ENSMICG00000000793	TRMT1	100	86.707	Microcebus_murinus
ENSBTAG00000019325	TRMT1	92	82.870	ENSMOCG00000015895	Trmt1	99	82.219	Microtus_ochrogaster
ENSBTAG00000019325	TRMT1	81	65.499	ENSMMOG00000011097	trmt1	92	65.499	Mola_mola
ENSBTAG00000019325	TRMT1	88	75.845	ENSMODG00000011619	TRMT1	100	75.845	Monodelphis_domestica
ENSBTAG00000019325	TRMT1	94	81.682	MGP_CAROLIEiJ_G0031304	Trmt1	100	82.129	Mus_caroli
ENSBTAG00000019325	TRMT1	94	82.219	ENSMUSG00000001909	Trmt1	100	81.749	Mus_musculus
ENSBTAG00000019325	TRMT1	94	82.219	MGP_SPRETEiJ_G0032422	Trmt1	100	81.369	Mus_spretus
ENSBTAG00000019325	TRMT1	98	85.673	ENSMPUG00000004210	TRMT1	100	85.673	Mustela_putorius_furo
ENSBTAG00000019325	TRMT1	95	86.289	ENSMLUG00000012809	TRMT1	100	86.289	Myotis_lucifugus
ENSBTAG00000019325	TRMT1	91	82.171	ENSNGAG00000022486	Trmt1	97	82.171	Nannospalax_galili
ENSBTAG00000019325	TRMT1	70	67.761	ENSNBRG00000024376	trmt1	85	67.761	Neolamprologus_brichardi
ENSBTAG00000019325	TRMT1	74	84.956	ENSNLEG00000013019	-	99	84.956	Nomascus_leucogenys
ENSBTAG00000019325	TRMT1	85	76.254	ENSMEUG00000013756	TRMT1	100	76.254	Notamacropus_eugenii
ENSBTAG00000019325	TRMT1	77	85.202	ENSOPRG00000009471	-	82	85.202	Ochotona_princeps
ENSBTAG00000019325	TRMT1	93	83.792	ENSODEG00000010323	TRMT1	99	83.792	Octodon_degus
ENSBTAG00000019325	TRMT1	88	64.423	ENSONIG00000000400	trmt1	99	64.423	Oreochromis_niloticus
ENSBTAG00000019325	TRMT1	74	88.550	ENSOCUG00000021934	TRMT1	99	88.550	Oryctolagus_cuniculus
ENSBTAG00000019325	TRMT1	81	61.618	ENSORLG00000020074	trmt1	90	61.618	Oryzias_latipes
ENSBTAG00000019325	TRMT1	82	64.533	ENSORLG00020007561	trmt1	90	64.360	Oryzias_latipes_hni
ENSBTAG00000019325	TRMT1	82	64.706	ENSORLG00015006547	trmt1	87	64.706	Oryzias_latipes_hsok
ENSBTAG00000019325	TRMT1	86	61.789	ENSOMEG00000019343	trmt1	93	61.789	Oryzias_melastigma
ENSBTAG00000019325	TRMT1	88	84.887	ENSOGAG00000025576	TRMT1	97	84.887	Otolemur_garnettii
ENSBTAG00000019325	TRMT1	100	81.188	ENSOARG00000009397	TRMT1	100	81.612	Ovis_aries
ENSBTAG00000019325	TRMT1	92	80.000	ENSPPRG00000012117	TRMT1	100	80.000	Panthera_pardus
ENSBTAG00000019325	TRMT1	72	90.578	ENSPTIG00000008833	TRMT1	97	90.578	Panthera_tigris_altaica
ENSBTAG00000019325	TRMT1	91	65.683	ENSPTRG00000050421	-	98	65.683	Pan_troglodytes
ENSBTAG00000019325	TRMT1	91	88.474	ENSPTRG00000010557	TRMT1	99	87.939	Pan_troglodytes
ENSBTAG00000019325	TRMT1	93	87.348	ENSPANG00000009247	TRMT1	99	87.348	Papio_anubis
ENSBTAG00000019325	TRMT1	80	73.486	ENSPANG00000034058	-	96	73.486	Papio_anubis
ENSBTAG00000019325	TRMT1	87	65.196	ENSPKIG00000005309	trmt1	89	65.196	Paramormyrops_kingsleyae
ENSBTAG00000019325	TRMT1	77	61.368	ENSPSIG00000008762	TRMT1	78	61.368	Pelodiscus_sinensis
ENSBTAG00000019325	TRMT1	86	63.576	ENSPMGG00000019764	trmt1	94	63.576	Periophthalmus_magnuspinnatus
ENSBTAG00000019325	TRMT1	92	84.938	ENSPEMG00000016247	Trmt1	100	83.183	Peromyscus_maniculatus_bairdii
ENSBTAG00000019325	TRMT1	83	59.794	ENSPMAG00000004329	trmt1	91	59.794	Petromyzon_marinus
ENSBTAG00000019325	TRMT1	91	73.920	ENSPCIG00000019273	TRMT1	99	73.920	Phascolarctos_cinereus
ENSBTAG00000019325	TRMT1	85	67.112	ENSPFOG00000008527	trmt1	91	67.112	Poecilia_formosa
ENSBTAG00000019325	TRMT1	85	66.833	ENSPLAG00000018788	trmt1	91	69.358	Poecilia_latipinna
ENSBTAG00000019325	TRMT1	85	66.945	ENSPMEG00000013120	trmt1	91	66.945	Poecilia_mexicana
ENSBTAG00000019325	TRMT1	81	67.832	ENSPREG00000000211	trmt1	85	68.007	Poecilia_reticulata
ENSBTAG00000019325	TRMT1	91	88.006	ENSPPYG00000009622	TRMT1	99	87.481	Pongo_abelii
ENSBTAG00000019325	TRMT1	92	78.154	ENSPCAG00000003698	TRMT1	99	78.154	Procavia_capensis
ENSBTAG00000019325	TRMT1	93	86.850	ENSPCOG00000008653	TRMT1	99	86.850	Propithecus_coquereli
ENSBTAG00000019325	TRMT1	93	88.092	ENSPVAG00000015076	TRMT1	99	88.092	Pteropus_vampyrus
ENSBTAG00000019325	TRMT1	84	61.937	ENSPNYG00000013960	trmt1	95	61.937	Pundamilia_nyererei
ENSBTAG00000019325	TRMT1	77	68.399	ENSPNAG00000024859	trmt1	89	68.399	Pygocentrus_nattereri
ENSBTAG00000019325	TRMT1	90	83.570	ENSRNOG00000002914	Trmt1	99	83.570	Rattus_norvegicus
ENSBTAG00000019325	TRMT1	89	68.139	ENSRBIG00000037505	-	99	68.006	Rhinopithecus_bieti
ENSBTAG00000019325	TRMT1	94	86.556	ENSRBIG00000038324	TRMT1	100	86.556	Rhinopithecus_bieti
ENSBTAG00000019325	TRMT1	89	67.512	ENSRROG00000031847	-	98	67.341	Rhinopithecus_roxellana
ENSBTAG00000019325	TRMT1	94	86.405	ENSRROG00000028599	TRMT1	100	86.405	Rhinopithecus_roxellana
ENSBTAG00000019325	TRMT1	72	37.313	YDR120C	-	92	37.687	Saccharomyces_cerevisiae
ENSBTAG00000019325	TRMT1	89	84.102	ENSSBOG00000028861	TRMT1	98	84.967	Saimiri_boliviensis_boliviensis
ENSBTAG00000019325	TRMT1	83	77.342	ENSSHAG00000014381	TRMT1	100	74.920	Sarcophilus_harrisii
ENSBTAG00000019325	TRMT1	85	66.057	ENSSFOG00015004139	trmt1	88	66.057	Scleropages_formosus
ENSBTAG00000019325	TRMT1	81	66.090	ENSSMAG00000021136	trmt1	89	64.286	Scophthalmus_maximus
ENSBTAG00000019325	TRMT1	83	66.214	ENSSDUG00000012740	trmt1	86	66.214	Seriola_dumerili
ENSBTAG00000019325	TRMT1	83	65.874	ENSSLDG00000005971	trmt1	86	65.874	Seriola_lalandi_dorsalis
ENSBTAG00000019325	TRMT1	81	84.155	ENSSARG00000005138	TRMT1	100	84.155	Sorex_araneus
ENSBTAG00000019325	TRMT1	73	60.542	ENSSPUG00000001084	TRMT1	87	60.928	Sphenodon_punctatus
ENSBTAG00000019325	TRMT1	82	64.594	ENSSPAG00000007153	trmt1	94	64.594	Stegastes_partitus
ENSBTAG00000019325	TRMT1	91	92.006	ENSSSCG00000013744	TRMT1	100	92.006	Sus_scrofa
ENSBTAG00000019325	TRMT1	83	61.486	ENSTRUG00000010700	trmt1	87	61.785	Takifugu_rubripes
ENSBTAG00000019325	TRMT1	81	65.271	ENSTNIG00000018808	trmt1	98	65.271	Tetraodon_nigroviridis
ENSBTAG00000019325	TRMT1	92	88.665	ENSTTRG00000006379	TRMT1	99	87.994	Tursiops_truncatus
ENSBTAG00000019325	TRMT1	92	88.923	ENSUAMG00000022911	TRMT1	99	88.923	Ursus_americanus
ENSBTAG00000019325	TRMT1	91	89.168	ENSUMAG00000006027	TRMT1	100	89.168	Ursus_maritimus
ENSBTAG00000019325	TRMT1	94	88.822	ENSVVUG00000024177	TRMT1	100	88.822	Vulpes_vulpes
ENSBTAG00000019325	TRMT1	66	72.017	ENSXETG00000033863	TRMT1	92	72.017	Xenopus_tropicalis
ENSBTAG00000019325	TRMT1	85	66.555	ENSXCOG00000015733	trmt1	91	66.722	Xiphophorus_couchianus
ENSBTAG00000019325	TRMT1	81	67.776	ENSXMAG00000013823	trmt1	97	68.007	Xiphophorus_maculatus