EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000019534 (Gene tree)
Gene ID: 407144
Gene Symbol: TRNT1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 24319 bases
Position: chr22:23148355-23172673
Accession: 36377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000026029	PolyA_pol	PF01743.20	3.2e-33	1	1
ENSBTAP00000073307	PolyA_pol	PF01743.20	3.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000076573	-	2101	-	ENSBTAP00000073307	434 (aa)	XP_005222680	UPI00005BF832
ENSBTAT00000026029	-	1537	-	ENSBTAP00000026029	434 (aa)	XP_005222680	Q1RML6

Gene Model

Click here to download ENSBTAG00000019534's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000019534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000019534	TRNT1	100	90.783	ENSG00000072756	TRNT1	100	90.783	Homo_sapiens
ENSBTAG00000019534	TRNT1	99	65.035	ENSAPOG00000013687	trnt1	99	65.035	Acanthochromis_polyacanthus
ENSBTAG00000019534	TRNT1	100	90.826	ENSAMEG00000014520	TRNT1	100	90.826	Ailuropoda_melanoleuca
ENSBTAG00000019534	TRNT1	98	66.824	ENSACIG00000021706	trnt1	99	66.824	Amphilophus_citrinellus
ENSBTAG00000019534	TRNT1	98	66.588	ENSAOCG00000024612	trnt1	99	66.588	Amphiprion_ocellaris
ENSBTAG00000019534	TRNT1	94	60.244	ENSAPEG00000022627	trnt1	95	60.244	Amphiprion_percula
ENSBTAG00000019534	TRNT1	93	69.231	ENSATEG00000008928	trnt1	99	69.231	Anabas_testudineus
ENSBTAG00000019534	TRNT1	89	76.486	ENSAPLG00000004258	TRNT1	96	76.486	Anas_platyrhynchos
ENSBTAG00000019534	TRNT1	98	74.884	ENSACAG00000005657	TRNT1	98	74.884	Anolis_carolinensis
ENSBTAG00000019534	TRNT1	100	91.475	ENSANAG00000024802	TRNT1	100	91.475	Aotus_nancymaae
ENSBTAG00000019534	TRNT1	98	65.647	ENSACLG00000022227	trnt1	99	65.647	Astatotilapia_calliptera
ENSBTAG00000019534	TRNT1	99	67.366	ENSAMXG00000003960	trnt1	99	67.209	Astyanax_mexicanus
ENSBTAG00000019534	TRNT1	94	43.230	WBGene00010089	hpo-31	94	43.230	Caenorhabditis_elegans
ENSBTAG00000019534	TRNT1	100	91.475	ENSCJAG00000015466	TRNT1	100	91.475	Callithrix_jacchus
ENSBTAG00000019534	TRNT1	100	91.014	ENSCAFG00000005985	TRNT1	99	91.014	Canis_familiaris
ENSBTAG00000019534	TRNT1	100	91.014	ENSCAFG00020014746	TRNT1	99	91.014	Canis_lupus_dingo
ENSBTAG00000019534	TRNT1	100	98.157	ENSCHIG00000007030	TRNT1	99	98.157	Capra_hircus
ENSBTAG00000019534	TRNT1	100	91.244	ENSTSYG00000013390	TRNT1	100	91.244	Carlito_syrichta
ENSBTAG00000019534	TRNT1	87	74.603	ENSCAPG00000006891	TRNT1	100	74.603	Cavia_aperea
ENSBTAG00000019534	TRNT1	99	90.069	ENSCPOG00000007849	TRNT1	99	90.069	Cavia_porcellus
ENSBTAG00000019534	TRNT1	95	88.942	ENSCCAG00000002919	TRNT1	100	91.022	Cebus_capucinus
ENSBTAG00000019534	TRNT1	99	91.224	ENSCATG00000031985	TRNT1	99	91.224	Cercocebus_atys
ENSBTAG00000019534	TRNT1	99	90.300	ENSCLAG00000005186	TRNT1	99	90.300	Chinchilla_lanigera
ENSBTAG00000019534	TRNT1	100	91.705	ENSCSAG00000011052	TRNT1	100	91.705	Chlorocebus_sabaeus
ENSBTAG00000019534	TRNT1	85	89.604	ENSCHOG00000005712	TRNT1	85	89.604	Choloepus_hoffmanni
ENSBTAG00000019534	TRNT1	94	80.392	ENSCPBG00000017636	TRNT1	93	80.392	Chrysemys_picta_bellii
ENSBTAG00000019534	TRNT1	93	44.310	ENSCING00000007069	-	100	44.310	Ciona_intestinalis
ENSBTAG00000019534	TRNT1	97	44.471	ENSCSAVG00000007494	-	100	44.471	Ciona_savignyi
ENSBTAG00000019534	TRNT1	100	91.244	ENSCANG00000039030	TRNT1	100	91.244	Colobus_angolensis_palliatus
ENSBTAG00000019534	TRNT1	100	91.475	ENSCGRG00001009998	Trnt1	100	91.475	Cricetulus_griseus_chok1gshd
ENSBTAG00000019534	TRNT1	100	91.475	ENSCGRG00000013410	Trnt1	100	91.475	Cricetulus_griseus_crigri
ENSBTAG00000019534	TRNT1	94	67.076	ENSCSEG00000008157	trnt1	96	67.076	Cynoglossus_semilaevis
ENSBTAG00000019534	TRNT1	94	67.813	ENSCVAG00000019770	trnt1	96	67.813	Cyprinodon_variegatus
ENSBTAG00000019534	TRNT1	97	67.062	ENSDARG00000075297	trnt1	97	67.062	Danio_rerio
ENSBTAG00000019534	TRNT1	100	88.710	ENSDNOG00000008837	TRNT1	100	88.710	Dasypus_novemcinctus
ENSBTAG00000019534	TRNT1	100	88.479	ENSDORG00000014035	Trnt1	100	88.479	Dipodomys_ordii
ENSBTAG00000019534	TRNT1	92	48.267	FBgn0037369	CG2100	83	48.267	Drosophila_melanogaster
ENSBTAG00000019534	TRNT1	57	87.149	ENSETEG00000018177	TRNT1	100	87.149	Echinops_telfairi
ENSBTAG00000019534	TRNT1	93	61.538	ENSEBUG00000012779	-	95	61.538	Eptatretus_burgeri
ENSBTAG00000019534	TRNT1	100	91.705	ENSEASG00005003577	TRNT1	100	91.705	Equus_asinus_asinus
ENSBTAG00000019534	TRNT1	100	91.935	ENSECAG00000014420	TRNT1	100	91.935	Equus_caballus
ENSBTAG00000019534	TRNT1	100	88.710	ENSEEUG00000009567	TRNT1	100	88.710	Erinaceus_europaeus
ENSBTAG00000019534	TRNT1	98	67.133	ENSELUG00000003802	trnt1	99	67.133	Esox_lucius
ENSBTAG00000019534	TRNT1	100	91.475	ENSFCAG00000026805	TRNT1	99	91.475	Felis_catus
ENSBTAG00000019534	TRNT1	89	74.805	ENSFALG00000013539	TRNT1	100	74.805	Ficedula_albicollis
ENSBTAG00000019534	TRNT1	99	90.069	ENSFDAG00000018412	TRNT1	99	90.069	Fukomys_damarensis
ENSBTAG00000019534	TRNT1	96	65.485	ENSFHEG00000019294	trnt1	99	65.485	Fundulus_heteroclitus
ENSBTAG00000019534	TRNT1	96	64.819	ENSGMOG00000007460	trnt1	96	64.819	Gadus_morhua
ENSBTAG00000019534	TRNT1	98	71.230	ENSGALG00000017368	TRNT1	99	71.230	Gallus_gallus
ENSBTAG00000019534	TRNT1	96	65.721	ENSGAFG00000008647	trnt1	99	65.721	Gambusia_affinis
ENSBTAG00000019534	TRNT1	94	65.848	ENSGACG00000011903	trnt1	96	66.492	Gasterosteus_aculeatus
ENSBTAG00000019534	TRNT1	96	79.327	ENSGAGG00000020942	TRNT1	95	79.327	Gopherus_agassizii
ENSBTAG00000019534	TRNT1	100	91.014	ENSGGOG00000015286	TRNT1	100	91.014	Gorilla_gorilla
ENSBTAG00000019534	TRNT1	98	65.647	ENSHBUG00000002797	trnt1	99	65.647	Haplochromis_burtoni
ENSBTAG00000019534	TRNT1	99	89.838	ENSHGLG00000003649	TRNT1	99	89.838	Heterocephalus_glaber_female
ENSBTAG00000019534	TRNT1	99	85.023	ENSHGLG00000000221	-	99	85.023	Heterocephalus_glaber_female
ENSBTAG00000019534	TRNT1	99	88.915	ENSHGLG00100016421	TRNT1	99	88.915	Heterocephalus_glaber_male
ENSBTAG00000019534	TRNT1	94	66.093	ENSHCOG00000010618	trnt1	95	66.093	Hippocampus_comes
ENSBTAG00000019534	TRNT1	96	67.067	ENSIPUG00000000971	trnt1	97	67.067	Ictalurus_punctatus
ENSBTAG00000019534	TRNT1	100	87.327	ENSSTOG00000000150	TRNT1	98	90.594	Ictidomys_tridecemlineatus
ENSBTAG00000019534	TRNT1	100	90.783	ENSJJAG00000018561	Trnt1	99	90.783	Jaculus_jaculus
ENSBTAG00000019534	TRNT1	96	65.330	ENSKMAG00000011307	trnt1	99	65.330	Kryptolebias_marmoratus
ENSBTAG00000019534	TRNT1	94	61.707	ENSLBEG00000019457	trnt1	97	61.707	Labrus_bergylta
ENSBTAG00000019534	TRNT1	96	73.012	ENSLACG00000013227	TRNT1	96	73.012	Latimeria_chalumnae
ENSBTAG00000019534	TRNT1	98	67.972	ENSLOCG00000011105	trnt1	98	67.972	Lepisosteus_oculatus
ENSBTAG00000019534	TRNT1	100	90.783	ENSLAFG00000023191	TRNT1	100	90.783	Loxodonta_africana
ENSBTAG00000019534	TRNT1	99	91.455	ENSMFAG00000045113	TRNT1	99	91.455	Macaca_fascicularis
ENSBTAG00000019534	TRNT1	99	91.455	ENSMMUG00000017983	TRNT1	99	91.455	Macaca_mulatta
ENSBTAG00000019534	TRNT1	99	91.455	ENSMNEG00000037805	TRNT1	99	91.455	Macaca_nemestrina
ENSBTAG00000019534	TRNT1	88	93.194	ENSMLEG00000033671	TRNT1	99	93.194	Mandrillus_leucophaeus
ENSBTAG00000019534	TRNT1	98	67.294	ENSMAMG00000023401	trnt1	99	67.294	Mastacembelus_armatus
ENSBTAG00000019534	TRNT1	98	65.647	ENSMZEG00005009141	trnt1	99	65.647	Maylandia_zebra
ENSBTAG00000019534	TRNT1	74	74.143	ENSMGAG00000009971	TRNT1	100	74.143	Meleagris_gallopavo
ENSBTAG00000019534	TRNT1	100	91.014	ENSMAUG00000020707	Trnt1	100	91.014	Mesocricetus_auratus
ENSBTAG00000019534	TRNT1	100	91.244	ENSMICG00000016615	TRNT1	100	91.244	Microcebus_murinus
ENSBTAG00000019534	TRNT1	100	90.783	ENSMOCG00000004539	Trnt1	100	90.783	Microtus_ochrogaster
ENSBTAG00000019534	TRNT1	98	64.941	ENSMMOG00000010742	trnt1	99	64.941	Mola_mola
ENSBTAG00000019534	TRNT1	100	82.258	ENSMODG00000004368	TRNT1	100	82.258	Monodelphis_domestica
ENSBTAG00000019534	TRNT1	98	65.412	ENSMALG00000008376	trnt1	99	65.412	Monopterus_albus
ENSBTAG00000019534	TRNT1	100	91.475	MGP_CAROLIEiJ_G0028698	Trnt1	100	91.475	Mus_caroli
ENSBTAG00000019534	TRNT1	100	91.475	ENSMUSG00000013736	Trnt1	100	91.475	Mus_musculus
ENSBTAG00000019534	TRNT1	100	90.783	MGP_PahariEiJ_G0022449	Trnt1	100	90.783	Mus_pahari
ENSBTAG00000019534	TRNT1	100	91.475	MGP_SPRETEiJ_G0029726	Trnt1	100	91.475	Mus_spretus
ENSBTAG00000019534	TRNT1	100	91.475	ENSMPUG00000017017	TRNT1	99	91.475	Mustela_putorius_furo
ENSBTAG00000019534	TRNT1	89	86.788	ENSMLUG00000011864	TRNT1	100	86.788	Myotis_lucifugus
ENSBTAG00000019534	TRNT1	100	90.783	ENSNGAG00000000537	Trnt1	100	90.783	Nannospalax_galili
ENSBTAG00000019534	TRNT1	79	65.797	ENSNBRG00000023606	trnt1	99	65.797	Neolamprologus_brichardi
ENSBTAG00000019534	TRNT1	100	91.935	ENSNLEG00000003226	TRNT1	100	91.935	Nomascus_leucogenys
ENSBTAG00000019534	TRNT1	100	82.028	ENSMEUG00000004684	TRNT1	100	82.028	Notamacropus_eugenii
ENSBTAG00000019534	TRNT1	88	78.851	ENSOPRG00000015067	TRNT1	99	78.851	Ochotona_princeps
ENSBTAG00000019534	TRNT1	99	89.838	ENSODEG00000007597	TRNT1	99	89.838	Octodon_degus
ENSBTAG00000019534	TRNT1	98	66.118	ENSONIG00000020273	trnt1	98	66.118	Oreochromis_niloticus
ENSBTAG00000019534	TRNT1	99	74.306	ENSOANG00000007514	TRNT1	99	74.306	Ornithorhynchus_anatinus
ENSBTAG00000019534	TRNT1	100	85.484	ENSOCUG00000008580	TRNT1	99	85.484	Oryctolagus_cuniculus
ENSBTAG00000019534	TRNT1	97	64.218	ENSORLG00000003165	trnt1	99	64.218	Oryzias_latipes
ENSBTAG00000019534	TRNT1	97	64.455	ENSORLG00020022060	trnt1	99	64.455	Oryzias_latipes_hni
ENSBTAG00000019534	TRNT1	97	63.744	ENSORLG00015018915	trnt1	99	63.744	Oryzias_latipes_hsok
ENSBTAG00000019534	TRNT1	95	63.592	ENSOMEG00000003331	trnt1	97	63.592	Oryzias_melastigma
ENSBTAG00000019534	TRNT1	100	97.926	ENSOARG00000008631	TRNT1	99	97.926	Ovis_aries
ENSBTAG00000019534	TRNT1	100	91.014	ENSPPAG00000043566	TRNT1	100	91.014	Pan_paniscus
ENSBTAG00000019534	TRNT1	99	91.224	ENSPPRG00000001327	TRNT1	99	91.224	Panthera_pardus
ENSBTAG00000019534	TRNT1	100	91.475	ENSPTIG00000011448	TRNT1	99	91.475	Panthera_tigris_altaica
ENSBTAG00000019534	TRNT1	100	91.014	ENSPTRG00000014564	TRNT1	100	91.014	Pan_troglodytes
ENSBTAG00000019534	TRNT1	99	91.224	ENSPANG00000025944	TRNT1	99	91.224	Papio_anubis
ENSBTAG00000019534	TRNT1	94	69.438	ENSPKIG00000020015	trnt1	95	69.438	Paramormyrops_kingsleyae
ENSBTAG00000019534	TRNT1	91	79.093	ENSPSIG00000017356	TRNT1	99	80.556	Pelodiscus_sinensis
ENSBTAG00000019534	TRNT1	98	64.941	ENSPMGG00000008888	trnt1	98	64.941	Periophthalmus_magnuspinnatus
ENSBTAG00000019534	TRNT1	100	91.705	ENSPEMG00000019845	Trnt1	100	91.705	Peromyscus_maniculatus_bairdii
ENSBTAG00000019534	TRNT1	100	82.488	ENSPCIG00000030436	TRNT1	100	82.488	Phascolarctos_cinereus
ENSBTAG00000019534	TRNT1	94	67.322	ENSPFOG00000006194	trnt1	95	67.322	Poecilia_formosa
ENSBTAG00000019534	TRNT1	94	67.322	ENSPLAG00000015623	trnt1	99	67.246	Poecilia_latipinna
ENSBTAG00000019534	TRNT1	96	65.721	ENSPMEG00000012216	trnt1	99	67.246	Poecilia_mexicana
ENSBTAG00000019534	TRNT1	96	65.721	ENSPREG00000021470	trnt1	99	65.721	Poecilia_reticulata
ENSBTAG00000019534	TRNT1	100	91.475	ENSPPYG00000013702	TRNT1	100	91.475	Pongo_abelii
ENSBTAG00000019534	TRNT1	88	89.556	ENSPCAG00000001951	TRNT1	100	89.556	Procavia_capensis
ENSBTAG00000019534	TRNT1	100	92.166	ENSPCOG00000022228	TRNT1	100	92.166	Propithecus_coquereli
ENSBTAG00000019534	TRNT1	88	90.885	ENSPVAG00000008784	TRNT1	100	90.885	Pteropus_vampyrus
ENSBTAG00000019534	TRNT1	98	65.647	ENSPNYG00000003120	trnt1	99	65.647	Pundamilia_nyererei
ENSBTAG00000019534	TRNT1	98	66.279	ENSPNAG00000000565	trnt1	99	66.279	Pygocentrus_nattereri
ENSBTAG00000019534	TRNT1	100	91.014	ENSRNOG00000006432	Trnt1	100	91.014	Rattus_norvegicus
ENSBTAG00000019534	TRNT1	100	88.710	ENSRBIG00000042632	TRNT1	100	88.710	Rhinopithecus_bieti
ENSBTAG00000019534	TRNT1	100	91.014	ENSRROG00000036866	TRNT1	100	91.014	Rhinopithecus_roxellana
ENSBTAG00000019534	TRNT1	100	91.475	ENSSBOG00000021208	TRNT1	100	91.475	Saimiri_boliviensis_boliviensis
ENSBTAG00000019534	TRNT1	100	82.488	ENSSHAG00000018861	TRNT1	100	82.488	Sarcophilus_harrisii
ENSBTAG00000019534	TRNT1	99	66.820	ENSSFOG00015020844	trnt1	99	67.290	Scleropages_formosus
ENSBTAG00000019534	TRNT1	98	65.882	ENSSMAG00000015432	trnt1	97	65.882	Scophthalmus_maximus
ENSBTAG00000019534	TRNT1	98	65.647	ENSSDUG00000012320	trnt1	99	65.647	Seriola_dumerili
ENSBTAG00000019534	TRNT1	56	63.900	ENSSLDG00000016463	-	91	64.017	Seriola_lalandi_dorsalis
ENSBTAG00000019534	TRNT1	98	65.647	ENSSLDG00000009325	trnt1	99	65.647	Seriola_lalandi_dorsalis
ENSBTAG00000019534	TRNT1	88	80.729	ENSSPUG00000014153	TRNT1	100	80.729	Sphenodon_punctatus
ENSBTAG00000019534	TRNT1	98	65.412	ENSSPAG00000021005	trnt1	99	65.412	Stegastes_partitus
ENSBTAG00000019534	TRNT1	100	94.931	ENSSSCG00000011529	TRNT1	100	94.931	Sus_scrofa
ENSBTAG00000019534	TRNT1	93	74.568	ENSTGUG00000010192	TRNT1	99	74.568	Taeniopygia_guttata
ENSBTAG00000019534	TRNT1	98	66.118	ENSTRUG00000001088	trnt1	99	66.118	Takifugu_rubripes
ENSBTAG00000019534	TRNT1	99	67.290	ENSTNIG00000007363	trnt1	99	67.290	Tetraodon_nigroviridis
ENSBTAG00000019534	TRNT1	70	73.408	ENSTBEG00000006367	TRNT1	100	73.408	Tupaia_belangeri
ENSBTAG00000019534	TRNT1	100	96.083	ENSTTRG00000007803	TRNT1	100	96.083	Tursiops_truncatus
ENSBTAG00000019534	TRNT1	100	90.323	ENSUAMG00000022574	TRNT1	99	90.323	Ursus_americanus
ENSBTAG00000019534	TRNT1	100	90.783	ENSUMAG00000024092	TRNT1	99	90.783	Ursus_maritimus
ENSBTAG00000019534	TRNT1	100	91.244	ENSVVUG00000012810	TRNT1	99	91.244	Vulpes_vulpes
ENSBTAG00000019534	TRNT1	98	63.403	ENSXETG00000025091	trnt1	99	65.672	Xenopus_tropicalis
ENSBTAG00000019534	TRNT1	96	65.485	ENSXCOG00000010150	trnt1	99	65.485	Xiphophorus_couchianus
ENSBTAG00000019534	TRNT1	96	65.248	ENSXMAG00000002227	trnt1	99	65.248	Xiphophorus_maculatus