EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSBTAG00000019697 (Gene tree)
Gene ID: 614049
Gene Symbol: NPAS2
Alias: -
Full Name: Bos taurus neuronal PAS domain protein 2 (NPAS2)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 130775 bases
Position: chr11:5846769-5977543
Accession: NM_001083763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000026259	Ribosomal_L31e	PF01198.19	2.1e-52	1	1
ENSBTAP00000072309	Ribosomal_L31e	PF01198.19	2.2e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000067089	-	1432	-	ENSBTAP00000072309	233 (aa)	-	-
ENSBTAT00000073725	-	3684	XM_024999125	ENSBTAP00000070462	804 (aa)	XP_024854893	A4IFH3
ENSBTAT00000026257	-	2484	-	ENSBTAP00000026257	827 (aa)	-	F6QL92
ENSBTAT00000026259	-	1423	-	ENSBTAP00000026259	230 (aa)	-	Q56JX3

Gene Model

Click here to download ENSBTAG00000019697's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta04710	Circadian rhythm	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000019697's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000019697	NPAS2	54	86.400	ENSBTAG00000046820	-	100	86.400