EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000019821 (Gene tree)
Gene ID: 281115
Gene Symbol: DHX9
Alias: -
Full Name: Bos taurus DExH-box helicase 9 (DHX9)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 41204 bases
Position: chr16:63896685-63937888
Accession: NM_174036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000026409	dsrm	PF00035.26	6.4e-27	1	2
ENSBTAP00000026409	dsrm	PF00035.26	6.4e-27	2	2
ENSBTAP00000026409	DEAD	PF00270.29	6.1e-06	1	1
ENSBTAP00000026409	HA2	PF04408.23	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000026409	-	4528	-	ENSBTAP00000026409	1287 (aa)	-	Q28141

Gene Model

Click here to download ENSBTAG00000019821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000019821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000019821	DHX9	60	36.143	ENSBTAG00000014679	DHX57	62	35.921
ENSBTAG00000019821	DHX9	63	48.837	ENSBTAG00000014099	YTHDC2	59	49.510
ENSBTAG00000019821	DHX9	62	34.223	ENSBTAG00000010510	DHX29	65	33.958
ENSBTAG00000019821	DHX9	59	38.306	ENSBTAG00000006142	DHX36	78	37.987
ENSBTAG00000019821	DHX9	58	34.115	ENSBTAG00000015833	DHX30	64	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000019821	DHX9	91	95.214	ENSG00000135829	DHX9	92	95.214	Homo_sapiens
ENSBTAG00000019821	DHX9	91	95.299	ENSAMEG00000002233	DHX9	92	95.299	Ailuropoda_melanoleuca
ENSBTAG00000019821	DHX9	91	76.994	ENSACIG00000016431	dhx9	93	76.594	Amphilophus_citrinellus
ENSBTAG00000019821	DHX9	84	77.294	ENSAOCG00000010719	dhx9	99	76.796	Amphiprion_ocellaris
ENSBTAG00000019821	DHX9	91	77.872	ENSAPEG00000006339	dhx9	91	77.527	Amphiprion_percula
ENSBTAG00000019821	DHX9	91	77.928	ENSATEG00000007101	dhx9	100	78.082	Anabas_testudineus
ENSBTAG00000019821	DHX9	91	84.923	ENSACAG00000005023	DHX9	93	84.497	Anolis_carolinensis
ENSBTAG00000019821	DHX9	100	90.705	ENSANAG00000030279	DHX9	92	94.786	Aotus_nancymaae
ENSBTAG00000019821	DHX9	93	75.941	ENSACLG00000022296	dhx9	99	77.230	Astatotilapia_calliptera
ENSBTAG00000019821	DHX9	93	42.097	WBGene00004355	rha-1	91	43.259	Caenorhabditis_elegans
ENSBTAG00000019821	DHX9	100	91.479	ENSCJAG00000004821	DHX9	92	94.530	Callithrix_jacchus
ENSBTAG00000019821	DHX9	91	94.872	ENSCAFG00000013205	DHX9	92	94.872	Canis_familiaris
ENSBTAG00000019821	DHX9	91	94.872	ENSCAFG00020014886	DHX9	92	94.872	Canis_lupus_dingo
ENSBTAG00000019821	DHX9	100	96.814	ENSCHIG00000018643	DHX9	100	96.814	Capra_hircus
ENSBTAG00000019821	DHX9	91	94.701	ENSTSYG00000007970	DHX9	100	93.593	Carlito_syrichta
ENSBTAG00000019821	DHX9	85	74.837	ENSCAPG00000015604	DHX9	81	86.634	Cavia_aperea
ENSBTAG00000019821	DHX9	98	88.663	ENSCPOG00000040669	DHX9	86	91.404	Cavia_porcellus
ENSBTAG00000019821	DHX9	89	93.683	ENSCCAG00000022597	DHX9	91	95.960	Cebus_capucinus
ENSBTAG00000019821	DHX9	91	95.128	ENSCATG00000027871	DHX9	99	94.890	Cercocebus_atys
ENSBTAG00000019821	DHX9	91	92.839	ENSCLAG00000010684	DHX9	85	92.747	Chinchilla_lanigera
ENSBTAG00000019821	DHX9	78	96.832	ENSCSAG00000012549	DHX9	90	96.832	Chlorocebus_sabaeus
ENSBTAG00000019821	DHX9	89	83.854	ENSCHOG00000012736	DHX9	99	84.115	Choloepus_hoffmanni
ENSBTAG00000019821	DHX9	91	87.362	ENSCPBG00000015757	DHX9	93	87.276	Chrysemys_picta_bellii
ENSBTAG00000019821	DHX9	92	59.851	ENSCSAVG00000001493	-	100	60.636	Ciona_savignyi
ENSBTAG00000019821	DHX9	98	92.460	ENSCANG00000032888	DHX9	91	97.538	Colobus_angolensis_palliatus
ENSBTAG00000019821	DHX9	91	92.577	ENSCGRG00001015796	Dhx9	95	92.150	Cricetulus_griseus_chok1gshd
ENSBTAG00000019821	DHX9	89	75.958	ENSCSEG00000017621	dhx9	99	75.784	Cynoglossus_semilaevis
ENSBTAG00000019821	DHX9	87	78.042	ENSCVAG00000009479	dhx9	93	77.885	Cyprinodon_variegatus
ENSBTAG00000019821	DHX9	93	75.967	ENSDARG00000079725	dhx9	92	78.014	Danio_rerio
ENSBTAG00000019821	DHX9	100	89.543	ENSDNOG00000004038	DHX9	92	94.274	Dasypus_novemcinctus
ENSBTAG00000019821	DHX9	92	92.134	ENSDORG00000012610	Dhx9	85	92.833	Dipodomys_ordii
ENSBTAG00000019821	DHX9	92	51.693	FBgn0002774	mle	91	51.635	Drosophila_melanogaster
ENSBTAG00000019821	DHX9	86	84.414	ENSETEG00000009729	DHX9	90	74.166	Echinops_telfairi
ENSBTAG00000019821	DHX9	84	64.880	ENSEBUG00000015945	-	88	69.207	Eptatretus_burgeri
ENSBTAG00000019821	DHX9	91	94.867	ENSEASG00005006589	DHX9	91	94.867	Equus_asinus_asinus
ENSBTAG00000019821	DHX9	91	94.867	ENSECAG00000011933	DHX9	93	94.867	Equus_caballus
ENSBTAG00000019821	DHX9	79	92.676	ENSEEUG00000004824	DHX9	73	92.676	Erinaceus_europaeus
ENSBTAG00000019821	DHX9	91	77.311	ENSELUG00000010512	dhx9	93	77.200	Esox_lucius
ENSBTAG00000019821	DHX9	91	95.319	ENSFCAG00000019306	DHX9	92	95.299	Felis_catus
ENSBTAG00000019821	DHX9	92	79.498	ENSFALG00000002992	DHX9	94	81.667	Ficedula_albicollis
ENSBTAG00000019821	DHX9	57	88.995	ENSFDAG00000011454	DHX9	100	88.602	Fukomys_damarensis
ENSBTAG00000019821	DHX9	91	88.020	ENSGAGG00000024443	DHX9	96	87.402	Gopherus_agassizii
ENSBTAG00000019821	DHX9	91	95.128	ENSGGOG00000013533	DHX9	92	95.128	Gorilla_gorilla
ENSBTAG00000019821	DHX9	86	85.127	ENSGGOG00000040887	-	93	84.541	Gorilla_gorilla
ENSBTAG00000019821	DHX9	93	75.696	ENSHBUG00000004129	dhx9	93	76.930	Haplochromis_burtoni
ENSBTAG00000019821	DHX9	91	92.235	ENSHGLG00000005769	DHX9	86	92.235	Heterocephalus_glaber_female
ENSBTAG00000019821	DHX9	91	92.235	ENSHGLG00100015628	DHX9	82	92.235	Heterocephalus_glaber_male
ENSBTAG00000019821	DHX9	90	74.071	ENSHCOG00000012968	dhx9	93	74.074	Hippocampus_comes
ENSBTAG00000019821	DHX9	90	78.438	ENSIPUG00000016675	dhx9	89	80.021	Ictalurus_punctatus
ENSBTAG00000019821	DHX9	91	93.644	ENSSTOG00000016288	DHX9	88	93.681	Ictidomys_tridecemlineatus
ENSBTAG00000019821	DHX9	91	60.634	ENSLACG00000017767	DHX9	93	60.550	Latimeria_chalumnae
ENSBTAG00000019821	DHX9	92	78.904	ENSLOCG00000002158	dhx9	94	80.034	Lepisosteus_oculatus
ENSBTAG00000019821	DHX9	97	90.953	ENSLAFG00000022058	DHX9	94	94.872	Loxodonta_africana
ENSBTAG00000019821	DHX9	91	95.214	ENSMFAG00000041152	DHX9	99	94.990	Macaca_fascicularis
ENSBTAG00000019821	DHX9	91	95.214	ENSMMUG00000005635	DHX9	92	95.214	Macaca_mulatta
ENSBTAG00000019821	DHX9	91	95.214	ENSMNEG00000041195	DHX9	92	95.214	Macaca_nemestrina
ENSBTAG00000019821	DHX9	91	95.128	ENSMLEG00000039925	DHX9	100	93.287	Mandrillus_leucophaeus
ENSBTAG00000019821	DHX9	92	77.102	ENSMAMG00000018644	dhx9	99	78.183	Mastacembelus_armatus
ENSBTAG00000019821	DHX9	93	75.941	ENSMZEG00005014167	dhx9	93	77.181	Maylandia_zebra
ENSBTAG00000019821	DHX9	91	92.662	ENSMAUG00000020414	Dhx9	88	89.052	Mesocricetus_auratus
ENSBTAG00000019821	DHX9	91	92.321	ENSMOCG00000019404	Dhx9	88	89.362	Microtus_ochrogaster
ENSBTAG00000019821	DHX9	87	75.263	ENSMMOG00000001268	dhx9	98	75.000	Mola_mola
ENSBTAG00000019821	DHX9	93	89.203	ENSMODG00000006955	DHX9	93	91.312	Monodelphis_domestica
ENSBTAG00000019821	DHX9	90	77.532	ENSMALG00000000318	dhx9	100	77.323	Monopterus_albus
ENSBTAG00000019821	DHX9	91	92.741	MGP_CAROLIEiJ_G0014709	Dhx9	100	89.252	Mus_caroli
ENSBTAG00000019821	DHX9	91	92.656	ENSMUSG00000042699	Dhx9	100	89.116	Mus_musculus
ENSBTAG00000019821	DHX9	91	92.741	MGP_SPRETEiJ_G0015516	Dhx9	98	97.500	Mus_spretus
ENSBTAG00000019821	DHX9	91	95.157	ENSMPUG00000011544	DHX9	98	95.299	Mustela_putorius_furo
ENSBTAG00000019821	DHX9	94	92.473	ENSMLUG00000011163	DHX9	92	93.504	Myotis_lucifugus
ENSBTAG00000019821	DHX9	91	95.043	ENSNLEG00000018013	DHX9	92	95.043	Nomascus_leucogenys
ENSBTAG00000019821	DHX9	71	93.269	ENSMEUG00000001470	-	76	93.269	Notamacropus_eugenii
ENSBTAG00000019821	DHX9	83	93.590	ENSOPRG00000016111	DHX9	93	93.590	Ochotona_princeps
ENSBTAG00000019821	DHX9	91	91.070	ENSODEG00000012659	DHX9	86	91.238	Octodon_degus
ENSBTAG00000019821	DHX9	91	89.469	ENSOANG00000000989	DHX9	92	89.640	Ornithorhynchus_anatinus
ENSBTAG00000019821	DHX9	91	76.071	ENSORLG00020015369	dhx9	96	75.903	Oryzias_latipes_hni
ENSBTAG00000019821	DHX9	91	76.027	ENSORLG00015000892	dhx9	94	73.494	Oryzias_latipes_hsok
ENSBTAG00000019821	DHX9	91	77.020	ENSOMEG00000002437	dhx9	99	76.936	Oryzias_melastigma
ENSBTAG00000019821	DHX9	91	93.174	ENSOGAG00000002620	DHX9	92	93.174	Otolemur_garnettii
ENSBTAG00000019821	DHX9	100	99.069	ENSOARG00000019089	DHX9	100	99.069	Ovis_aries
ENSBTAG00000019821	DHX9	91	95.214	ENSPPAG00000030190	DHX9	99	94.990	Pan_paniscus
ENSBTAG00000019821	DHX9	91	95.234	ENSPPRG00000005890	DHX9	92	95.214	Panthera_pardus
ENSBTAG00000019821	DHX9	91	95.234	ENSPTIG00000021059	DHX9	92	95.214	Panthera_tigris_altaica
ENSBTAG00000019821	DHX9	91	95.214	ENSPTRG00000001759	DHX9	92	95.214	Pan_troglodytes
ENSBTAG00000019821	DHX9	91	95.128	ENSPANG00000012826	DHX9	92	95.128	Papio_anubis
ENSBTAG00000019821	DHX9	94	76.910	ENSPKIG00000006698	dhx9	93	78.571	Paramormyrops_kingsleyae
ENSBTAG00000019821	DHX9	91	90.886	ENSPCIG00000003716	DHX9	98	91.126	Phascolarctos_cinereus
ENSBTAG00000019821	DHX9	90	77.986	ENSPFOG00000019152	-	100	77.816	Poecilia_formosa
ENSBTAG00000019821	DHX9	91	78.220	ENSPLAG00000001496	dhx9	96	77.985	Poecilia_latipinna
ENSBTAG00000019821	DHX9	90	77.901	ENSPMEG00000019991	dhx9	99	77.730	Poecilia_mexicana
ENSBTAG00000019821	DHX9	91	77.468	ENSPREG00000019307	dhx9	97	77.572	Poecilia_reticulata
ENSBTAG00000019821	DHX9	100	92.332	ENSPPYG00000000431	DHX9	92	95.214	Pongo_abelii
ENSBTAG00000019821	DHX9	87	94.444	ENSPCAG00000011042	DHX9	86	96.623	Procavia_capensis
ENSBTAG00000019821	DHX9	91	93.766	ENSPVAG00000000836	DHX9	92	93.766	Pteropus_vampyrus
ENSBTAG00000019821	DHX9	94	76.092	ENSPNYG00000008480	dhx9	93	78.090	Pundamilia_nyererei
ENSBTAG00000019821	DHX9	91	92.242	ENSRNOG00000002735	Dhx9	99	92.321	Rattus_norvegicus
ENSBTAG00000019821	DHX9	91	95.043	ENSRBIG00000041202	DHX9	92	95.043	Rhinopithecus_bieti
ENSBTAG00000019821	DHX9	91	95.043	ENSRROG00000044740	DHX9	92	95.043	Rhinopithecus_roxellana
ENSBTAG00000019821	DHX9	99	86.953	ENSSBOG00000026174	DHX9	92	90.085	Saimiri_boliviensis_boliviensis
ENSBTAG00000019821	DHX9	91	90.986	ENSSHAG00000008540	DHX9	97	91.397	Sarcophilus_harrisii
ENSBTAG00000019821	DHX9	91	78.529	ENSSFOG00015017378	dhx9	93	78.591	Scleropages_formosus
ENSBTAG00000019821	DHX9	89	77.119	ENSSDUG00000017407	dhx9	100	76.610	Seriola_dumerili
ENSBTAG00000019821	DHX9	89	78.627	ENSSLDG00000003926	dhx9	99	78.540	Seriola_lalandi_dorsalis
ENSBTAG00000019821	DHX9	82	96.396	ENSSARG00000003931	DHX9	92	96.396	Sorex_araneus
ENSBTAG00000019821	DHX9	91	85.908	ENSSPUG00000003934	DHX9	93	85.775	Sphenodon_punctatus
ENSBTAG00000019821	DHX9	91	78.283	ENSSPAG00000009690	dhx9	91	77.674	Stegastes_partitus
ENSBTAG00000019821	DHX9	91	94.859	ENSSSCG00000026806	DHX9	86	94.078	Sus_scrofa
ENSBTAG00000019821	DHX9	67	78.813	ENSTGUG00000004038	-	100	78.813	Taeniopygia_guttata
ENSBTAG00000019821	DHX9	73	88.558	ENSTBEG00000014052	DHX9	70	89.130	Tupaia_belangeri
ENSBTAG00000019821	DHX9	89	92.808	ENSTTRG00000007665	DHX9	100	92.808	Tursiops_truncatus
ENSBTAG00000019821	DHX9	91	95.128	ENSUAMG00000012201	DHX9	100	94.021	Ursus_americanus
ENSBTAG00000019821	DHX9	91	95.214	ENSUMAG00000016482	DHX9	92	95.214	Ursus_maritimus
ENSBTAG00000019821	DHX9	84	89.779	ENSVPAG00000008097	DHX9	86	90.340	Vicugna_pacos
ENSBTAG00000019821	DHX9	91	94.872	ENSVVUG00000008915	DHX9	92	94.872	Vulpes_vulpes
ENSBTAG00000019821	DHX9	94	79.804	ENSXETG00000012515	dhx9	93	81.988	Xenopus_tropicalis
ENSBTAG00000019821	DHX9	93	76.092	ENSXMAG00000011305	dhx9	94	77.542	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000380	alternative mRNA splicing, via spliceosome	-	ISS	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISS	Function
GO:0000993	RNA polymerase II complex binding	-	IEA	Function
GO:0001069	regulatory region RNA binding	-	IEA	Function
GO:0001085	RNA polymerase II transcription factor binding	-	IEA	Function
GO:0003677	DNA binding	7511411.	IDA	Function
GO:0003688	DNA replication origin binding	-	ISS	Function
GO:0003690	double-stranded DNA binding	-	ISS	Function
GO:0003697	single-stranded DNA binding	-	ISS	Function
GO:0003713	transcription coactivator activity	-	ISS	Function
GO:0003723	RNA binding	7511411.	IDA	Function
GO:0003725	double-stranded RNA binding	-	ISS	Function
GO:0003727	single-stranded RNA binding	-	ISS	Function
GO:0003729	mRNA binding	-	ISS	Function
GO:0004004	ATP-dependent RNA helicase activity	7511411.	IDA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005654	nucleoplasm	-	ISS	Component
GO:0005726	perichromatin fibrils	-	ISS	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005813	centrosome	-	IEA	Component
GO:0005844	polysome	-	ISS	Component
GO:0006260	DNA replication	-	IEA	Process
GO:0006353	DNA-templated transcription, termination	-	IEA	Process
GO:0006954	inflammatory response	-	IEA	Process
GO:0010501	RNA secondary structure unwinding	-	ISS	Process
GO:0015629	actin cytoskeleton	-	ISS	Component
GO:0016604	nuclear body	-	ISS	Component
GO:0016887	ATPase activity	7511411.	IDA	Function
GO:0017111	nucleoside-triphosphatase activity	7511411.	IDA	Function
GO:0030423	targeting of mRNA for destruction involved in RNA interference	-	ISS	Process
GO:0031490	chromatin DNA binding	-	ISS	Function
GO:0032508	DNA duplex unwinding	7511411.	IDA	Process
GO:0033681	ATP-dependent 3'-5' DNA/RNA helicase activity	-	ISS	Function
GO:0034459	ATP-dependent 3'-5' RNA helicase activity	-	ISS	Function
GO:0035068	micro-ribonucleoprotein complex	-	ISS	Component
GO:0035197	siRNA binding	-	IEA	Function
GO:0035549	positive regulation of interferon-beta secretion	-	ISS	Process
GO:0035613	RNA stem-loop binding	-	ISS	Function
GO:0036464	cytoplasmic ribonucleoprotein granule	-	ISS	Component
GO:0039695	DNA-templated viral transcription	-	IEA	Process
GO:0042788	polysomal ribosome	-	ISS	Component
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	7511411.	IDA	Function
GO:0044806	G-quadruplex DNA unwinding	-	ISS	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0045142	triplex DNA binding	-	ISS	Function
GO:0045739	positive regulation of DNA repair	-	ISS	Process
GO:0045740	positive regulation of DNA replication	-	ISS	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISS	Process
GO:0046833	positive regulation of RNA export from nucleus	-	ISS	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0047429	nucleoside-triphosphate diphosphatase activity	-	ISS	Function
GO:0048146	positive regulation of fibroblast proliferation	-	ISS	Process
GO:0048511	rhythmic process	-	IEA	Process
GO:0050434	positive regulation of viral transcription	-	IEA	Process
GO:0050684	regulation of mRNA processing	-	ISS	Process
GO:0051028	mRNA transport	-	IEA	Process
GO:0051092	positive regulation of NF-kappaB transcription factor activity	-	ISS	Process
GO:0060760	positive regulation of response to cytokine stimulus	-	ISS	Process
GO:0061676	importin-alpha family protein binding	-	ISS	Function
GO:0070063	RNA polymerase binding	-	ISS	Function
GO:0070578	RISC-loading complex	-	ISS	Component
GO:0070922	small RNA loading onto RISC	-	ISS	Process
GO:0070934	CRD-mediated mRNA stabilization	-	IEA	Process
GO:0070937	CRD-mediated mRNA stability complex	-	ISS	Component
GO:0071356	cellular response to tumor necrosis factor	-	ISS	Process
GO:0071360	cellular response to exogenous dsRNA	-	ISS	Process
GO:0097165	nuclear stress granule	-	ISS	Component
GO:1902741	positive regulation of interferon-alpha secretion	-	ISS	Process
GO:1903608	protein localization to cytoplasmic stress granule	-	IEA	Process
GO:1904469	positive regulation of tumor necrosis factor secretion	-	ISS	Process
GO:1904973	positive regulation of viral translation	-	IEA	Process
GO:1905172	RISC complex binding	-	ISS	Function
GO:1905538	polysome binding	-	ISS	Function
GO:1905698	positive regulation of polysome binding	-	ISS	Process
GO:1990518	single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity	-	ISS	Function
GO:1990825	sequence-specific mRNA binding	-	ISS	Function
GO:1990841	promoter-specific chromatin binding	-	ISS	Function
GO:1990904	ribonucleoprotein complex	-	ISS	Component
GO:2000373	positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity	-	ISS	Process
GO:2000637	positive regulation of gene silencing by miRNA	-	ISS	Process
GO:2000765	regulation of cytoplasmic translation	-	ISS	Process
GO:2000767	positive regulation of cytoplasmic translation	-	ISS	Process
GO:2000778	positive regulation of interleukin-6 secretion	-	ISS	Process