EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000019949 (Gene tree)
Gene ID: 530188
Gene Symbol: DBR1
Alias: -
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 12784 bases
Position: chr1:130942894-130955677
Accession: 27895
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000047786	DBR1	PF05011.13	2.3e-35	1	1
ENSBTAP00000026574	DBR1	PF05011.13	2.5e-35	1	1
ENSBTAP00000072770	DBR1	PF05011.13	7.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000052202	-	2649	-	ENSBTAP00000047786	517 (aa)	-	A1L526
ENSBTAT00000026574	-	3010	-	ENSBTAP00000026574	544 (aa)	XP_005201933	A5PJS3
ENSBTAT00000072006	-	2649	-	ENSBTAP00000072770	517 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000019949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000019949's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000019949	DBR1	98	88.411	ENSG00000138231	DBR1	94	94.595	Homo_sapiens
ENSBTAG00000019949	DBR1	99	56.137	ENSAPOG00000004318	dbr1	99	56.137	Acanthochromis_polyacanthus
ENSBTAG00000019949	DBR1	98	89.850	ENSAMEG00000006272	DBR1	100	89.649	Ailuropoda_melanoleuca
ENSBTAG00000019949	DBR1	99	53.943	ENSACIG00000020512	dbr1	99	55.296	Amphilophus_citrinellus
ENSBTAG00000019949	DBR1	99	55.856	ENSAOCG00000008060	dbr1	99	55.856	Amphiprion_ocellaris
ENSBTAG00000019949	DBR1	99	55.914	ENSAPEG00000021944	dbr1	99	55.914	Amphiprion_percula
ENSBTAG00000019949	DBR1	99	55.477	ENSATEG00000019673	dbr1	99	57.067	Anabas_testudineus
ENSBTAG00000019949	DBR1	99	66.788	ENSACAG00000016760	DBR1	99	66.788	Anolis_carolinensis
ENSBTAG00000019949	DBR1	98	87.406	ENSANAG00000028952	DBR1	99	87.316	Aotus_nancymaae
ENSBTAG00000019949	DBR1	99	54.348	ENSACLG00000024027	dbr1	99	54.770	Astatotilapia_calliptera
ENSBTAG00000019949	DBR1	99	54.895	ENSAMXG00000030736	dbr1	99	55.245	Astyanax_mexicanus
ENSBTAG00000019949	DBR1	75	42.890	WBGene00000937	dbr-1	85	42.890	Caenorhabditis_elegans
ENSBTAG00000019949	DBR1	98	87.664	ENSCJAG00000002433	DBR1	99	87.638	Callithrix_jacchus
ENSBTAG00000019949	DBR1	98	89.720	ENSCAFG00000007501	DBR1	100	89.522	Canis_familiaris
ENSBTAG00000019949	DBR1	98	89.961	ENSCAFG00020008060	DBR1	100	89.749	Canis_lupus_dingo
ENSBTAG00000019949	DBR1	100	97.794	ENSCHIG00000026937	DBR1	100	97.794	Capra_hircus
ENSBTAG00000019949	DBR1	99	83.456	ENSTSYG00000005317	DBR1	99	84.559	Carlito_syrichta
ENSBTAG00000019949	DBR1	98	83.178	ENSCPOG00000006179	DBR1	100	82.601	Cavia_porcellus
ENSBTAG00000019949	DBR1	98	87.664	ENSCCAG00000025708	DBR1	100	87.500	Cebus_capucinus
ENSBTAG00000019949	DBR1	98	88.910	ENSCATG00000032054	DBR1	99	88.787	Cercocebus_atys
ENSBTAG00000019949	DBR1	98	86.168	ENSCLAG00000001800	DBR1	100	85.897	Chinchilla_lanigera
ENSBTAG00000019949	DBR1	98	88.534	ENSCSAG00000010977	DBR1	99	88.419	Chlorocebus_sabaeus
ENSBTAG00000019949	DBR1	90	92.157	ENSCHOG00000000730	DBR1	89	92.157	Choloepus_hoffmanni
ENSBTAG00000019949	DBR1	99	72.192	ENSCPBG00000007633	DBR1	90	72.192	Chrysemys_picta_bellii
ENSBTAG00000019949	DBR1	80	54.338	ENSCING00000011388	-	99	54.338	Ciona_intestinalis
ENSBTAG00000019949	DBR1	69	58.047	ENSCSAVG00000007545	-	100	58.047	Ciona_savignyi
ENSBTAG00000019949	DBR1	99	88.290	ENSCANG00000024237	DBR1	99	88.051	Colobus_angolensis_palliatus
ENSBTAG00000019949	DBR1	99	86.397	ENSCGRG00001018497	Dbr1	99	86.581	Cricetulus_griseus_chok1gshd
ENSBTAG00000019949	DBR1	99	80.515	ENSCGRG00000005958	Dbr1	99	80.699	Cricetulus_griseus_crigri
ENSBTAG00000019949	DBR1	99	54.270	ENSCSEG00000002813	dbr1	99	54.804	Cynoglossus_semilaevis
ENSBTAG00000019949	DBR1	99	53.819	ENSCVAG00000019969	dbr1	99	55.117	Cyprinodon_variegatus
ENSBTAG00000019949	DBR1	79	63.014	ENSDARG00000056923	dbr1	99	54.021	Danio_rerio
ENSBTAG00000019949	DBR1	98	86.916	ENSDNOG00000043630	DBR1	99	86.581	Dasypus_novemcinctus
ENSBTAG00000019949	DBR1	68	64.979	FBgn0035838	ldbr	78	51.185	Drosophila_melanogaster
ENSBTAG00000019949	DBR1	78	97.015	ENSETEG00000011830	DBR1	80	97.015	Echinops_telfairi
ENSBTAG00000019949	DBR1	99	46.794	ENSEBUG00000007494	dbr1	99	46.967	Eptatretus_burgeri
ENSBTAG00000019949	DBR1	98	90.551	ENSEASG00005003788	DBR1	100	90.329	Equus_asinus_asinus
ENSBTAG00000019949	DBR1	98	90.748	ENSECAG00000013920	DBR1	100	90.522	Equus_caballus
ENSBTAG00000019949	DBR1	100	79.083	ENSEEUG00000007059	DBR1	100	79.633	Erinaceus_europaeus
ENSBTAG00000019949	DBR1	99	52.356	ENSELUG00000005587	dbr1	99	54.007	Esox_lucius
ENSBTAG00000019949	DBR1	98	89.907	ENSFCAG00000002229	DBR1	100	89.706	Felis_catus
ENSBTAG00000019949	DBR1	99	71.429	ENSFALG00000013467	DBR1	86	71.795	Ficedula_albicollis
ENSBTAG00000019949	DBR1	98	86.168	ENSFDAG00000009524	DBR1	99	85.846	Fukomys_damarensis
ENSBTAG00000019949	DBR1	99	53.982	ENSFHEG00000001743	dbr1	99	54.513	Fundulus_heteroclitus
ENSBTAG00000019949	DBR1	99	54.025	ENSGMOG00000006925	dbr1	99	54.025	Gadus_morhua
ENSBTAG00000019949	DBR1	99	63.051	ENSGALG00000043797	DBR1	99	63.235	Gallus_gallus
ENSBTAG00000019949	DBR1	99	55.109	ENSGAFG00000001046	dbr1	99	55.474	Gambusia_affinis
ENSBTAG00000019949	DBR1	99	53.832	ENSGACG00000009122	dbr1	99	54.448	Gasterosteus_aculeatus
ENSBTAG00000019949	DBR1	99	72.007	ENSGAGG00000001244	DBR1	100	72.007	Gopherus_agassizii
ENSBTAG00000019949	DBR1	98	83.364	ENSGGOG00000004564	DBR1	99	83.395	Gorilla_gorilla
ENSBTAG00000019949	DBR1	99	53.534	ENSHBUG00000000882	dbr1	99	54.770	Haplochromis_burtoni
ENSBTAG00000019949	DBR1	98	86.542	ENSHGLG00000014529	Dbr1	99	86.213	Heterocephalus_glaber_female
ENSBTAG00000019949	DBR1	98	86.542	ENSHGLG00100013202	Dbr1	99	86.213	Heterocephalus_glaber_male
ENSBTAG00000019949	DBR1	99	55.456	ENSHCOG00000004179	dbr1	99	55.456	Hippocampus_comes
ENSBTAG00000019949	DBR1	99	52.522	ENSIPUG00000023749	dbr1	100	53.217	Ictalurus_punctatus
ENSBTAG00000019949	DBR1	99	87.918	ENSSTOG00000007122	DBR1	99	87.823	Ictidomys_tridecemlineatus
ENSBTAG00000019949	DBR1	99	85.478	ENSJJAG00000017080	Dbr1	99	85.478	Jaculus_jaculus
ENSBTAG00000019949	DBR1	99	52.143	ENSKMAG00000004869	dbr1	99	51.439	Kryptolebias_marmoratus
ENSBTAG00000019949	DBR1	99	55.458	ENSLBEG00000021307	dbr1	99	55.810	Labrus_bergylta
ENSBTAG00000019949	DBR1	99	68.613	ENSLACG00000005547	DBR1	99	68.613	Latimeria_chalumnae
ENSBTAG00000019949	DBR1	78	66.667	ENSLOCG00000004160	dbr1	99	57.424	Lepisosteus_oculatus
ENSBTAG00000019949	DBR1	100	88.235	ENSLAFG00000005827	DBR1	100	88.235	Loxodonta_africana
ENSBTAG00000019949	DBR1	98	88.722	ENSMFAG00000043642	DBR1	99	88.603	Macaca_fascicularis
ENSBTAG00000019949	DBR1	98	88.534	ENSMMUG00000021284	DBR1	99	88.419	Macaca_mulatta
ENSBTAG00000019949	DBR1	98	88.722	ENSMNEG00000041740	DBR1	99	88.603	Macaca_nemestrina
ENSBTAG00000019949	DBR1	93	75.468	ENSMLEG00000034542	DBR1	95	79.085	Mandrillus_leucophaeus
ENSBTAG00000019949	DBR1	99	54.240	ENSMAMG00000012205	dbr1	99	54.707	Mastacembelus_armatus
ENSBTAG00000019949	DBR1	99	53.534	ENSMZEG00005021338	dbr1	99	54.770	Maylandia_zebra
ENSBTAG00000019949	DBR1	80	68.421	ENSMGAG00000002142	DBR1	99	68.421	Meleagris_gallopavo
ENSBTAG00000019949	DBR1	99	86.347	ENSMAUG00000010037	Dbr1	99	86.347	Mesocricetus_auratus
ENSBTAG00000019949	DBR1	98	89.159	ENSMICG00000049533	DBR1	99	89.114	Microcebus_murinus
ENSBTAG00000019949	DBR1	99	83.764	ENSMOCG00000018746	Dbr1	99	83.764	Microtus_ochrogaster
ENSBTAG00000019949	DBR1	99	53.451	ENSMMOG00000000719	dbr1	99	54.610	Mola_mola
ENSBTAG00000019949	DBR1	99	76.557	ENSMODG00000018554	DBR1	99	76.557	Monodelphis_domestica
ENSBTAG00000019949	DBR1	99	53.521	ENSMALG00000022283	dbr1	97	54.787	Monopterus_albus
ENSBTAG00000019949	DBR1	98	83.643	MGP_CAROLIEiJ_G0032564	Dbr1	100	96.319	Mus_caroli
ENSBTAG00000019949	DBR1	100	84.124	ENSMUSG00000032469	Dbr1	100	96.319	Mus_musculus
ENSBTAG00000019949	DBR1	99	84.715	MGP_PahariEiJ_G0015433	Dbr1	100	96.319	Mus_pahari
ENSBTAG00000019949	DBR1	99	85.028	MGP_SPRETEiJ_G0033708	Dbr1	100	96.319	Mus_spretus
ENSBTAG00000019949	DBR1	98	90.093	ENSMPUG00000009230	DBR1	100	89.890	Mustela_putorius_furo
ENSBTAG00000019949	DBR1	98	86.965	ENSMLUG00000026117	DBR1	100	86.630	Myotis_lucifugus
ENSBTAG00000019949	DBR1	100	86.765	ENSNGAG00000003518	Dbr1	99	86.765	Nannospalax_galili
ENSBTAG00000019949	DBR1	99	53.616	ENSNBRG00000016318	dbr1	99	54.497	Neolamprologus_brichardi
ENSBTAG00000019949	DBR1	99	88.476	ENSNLEG00000032263	DBR1	97	88.376	Nomascus_leucogenys
ENSBTAG00000019949	DBR1	99	76.374	ENSMEUG00000009188	DBR1	100	76.374	Notamacropus_eugenii
ENSBTAG00000019949	DBR1	93	72.277	ENSOPRG00000016510	DBR1	99	72.277	Ochotona_princeps
ENSBTAG00000019949	DBR1	99	84.162	ENSODEG00000018178	DBR1	99	84.162	Octodon_degus
ENSBTAG00000019949	DBR1	99	54.049	ENSONIG00000013801	dbr1	99	54.754	Oreochromis_niloticus
ENSBTAG00000019949	DBR1	88	71.341	ENSOANG00000007783	DBR1	100	72.358	Ornithorhynchus_anatinus
ENSBTAG00000019949	DBR1	94	86.667	ENSOCUG00000015129	DBR1	90	86.293	Oryctolagus_cuniculus
ENSBTAG00000019949	DBR1	100	56.137	ENSORLG00015001112	dbr1	99	56.498	Oryzias_latipes_hsok
ENSBTAG00000019949	DBR1	100	54.069	ENSOMEG00000000857	dbr1	99	54.611	Oryzias_melastigma
ENSBTAG00000019949	DBR1	98	89.474	ENSOGAG00000033095	DBR1	99	89.483	Otolemur_garnettii
ENSBTAG00000019949	DBR1	100	96.691	ENSOARG00000007589	DBR1	100	96.691	Ovis_aries
ENSBTAG00000019949	DBR1	98	88.224	ENSPPAG00000031137	DBR1	99	88.192	Pan_paniscus
ENSBTAG00000019949	DBR1	98	90.467	ENSPPRG00000013629	DBR1	100	90.257	Panthera_pardus
ENSBTAG00000019949	DBR1	96	90.057	ENSPTIG00000012674	DBR1	98	89.850	Panthera_tigris_altaica
ENSBTAG00000019949	DBR1	98	88.224	ENSPTRG00000015441	DBR1	99	88.192	Pan_troglodytes
ENSBTAG00000019949	DBR1	98	88.534	ENSPANG00000012664	DBR1	99	88.419	Papio_anubis
ENSBTAG00000019949	DBR1	100	56.316	ENSPKIG00000000310	dbr1	100	56.316	Paramormyrops_kingsleyae
ENSBTAG00000019949	DBR1	88	70.084	ENSPSIG00000015486	DBR1	99	70.084	Pelodiscus_sinensis
ENSBTAG00000019949	DBR1	98	85.981	ENSPEMG00000020602	Dbr1	98	85.793	Peromyscus_maniculatus_bairdii
ENSBTAG00000019949	DBR1	70	62.105	ENSPMAG00000008620	dbr1	100	62.105	Petromyzon_marinus
ENSBTAG00000019949	DBR1	99	76.234	ENSPCIG00000006494	DBR1	99	76.234	Phascolarctos_cinereus
ENSBTAG00000019949	DBR1	73	45.026	ENSPLAG00000002421	-	99	45.550	Poecilia_latipinna
ENSBTAG00000019949	DBR1	99	55.109	ENSPLAG00000011665	dbr1	99	55.474	Poecilia_latipinna
ENSBTAG00000019949	DBR1	74	45.128	ENSPMEG00000020884	-	94	45.385	Poecilia_mexicana
ENSBTAG00000019949	DBR1	99	55.172	ENSPMEG00000010080	dbr1	99	55.354	Poecilia_mexicana
ENSBTAG00000019949	DBR1	99	54.909	ENSPREG00000020157	dbr1	99	55.091	Poecilia_reticulata
ENSBTAG00000019949	DBR1	99	88.848	ENSPPYG00000014139	DBR1	99	88.745	Pongo_abelii
ENSBTAG00000019949	DBR1	72	90.231	ENSPCAG00000012956	DBR1	99	90.231	Procavia_capensis
ENSBTAG00000019949	DBR1	98	89.346	ENSPCOG00000016894	DBR1	99	88.930	Propithecus_coquereli
ENSBTAG00000019949	DBR1	91	98.462	ENSPVAG00000007713	DBR1	100	81.250	Pteropus_vampyrus
ENSBTAG00000019949	DBR1	99	54.674	ENSPNYG00000015453	dbr1	99	54.850	Pundamilia_nyererei
ENSBTAG00000019949	DBR1	99	54.561	ENSPNAG00000025595	dbr1	100	56.021	Pygocentrus_nattereri
ENSBTAG00000019949	DBR1	99	84.899	ENSRNOG00000014588	Dbr1	99	84.899	Rattus_norvegicus
ENSBTAG00000019949	DBR1	98	88.037	ENSRBIG00000045002	DBR1	99	88.007	Rhinopithecus_bieti
ENSBTAG00000019949	DBR1	98	88.224	ENSRROG00000044819	DBR1	99	88.192	Rhinopithecus_roxellana
ENSBTAG00000019949	DBR1	51	39.385	YKL149C	DBR1	79	39.385	Saccharomyces_cerevisiae
ENSBTAG00000019949	DBR1	98	87.664	ENSSBOG00000032048	DBR1	99	87.638	Saimiri_boliviensis_boliviensis
ENSBTAG00000019949	DBR1	100	76.095	ENSSHAG00000006752	DBR1	99	76.234	Sarcophilus_harrisii
ENSBTAG00000019949	DBR1	99	56.498	ENSSFOG00015011410	dbr1	99	56.498	Scleropages_formosus
ENSBTAG00000019949	DBR1	99	55.872	ENSSMAG00000016078	dbr1	99	56.250	Scophthalmus_maximus
ENSBTAG00000019949	DBR1	99	55.148	ENSSDUG00000017849	dbr1	99	55.614	Seriola_dumerili
ENSBTAG00000019949	DBR1	99	54.306	ENSSLDG00000019891	dbr1	99	55.634	Seriola_lalandi_dorsalis
ENSBTAG00000019949	DBR1	99	74.632	ENSSARG00000009558	-	99	74.632	Sorex_araneus
ENSBTAG00000019949	DBR1	55	97.333	ENSSARG00000003148	-	74	97.333	Sorex_araneus
ENSBTAG00000019949	DBR1	89	65.844	ENSSPUG00000004724	DBR1	93	65.779	Sphenodon_punctatus
ENSBTAG00000019949	DBR1	99	56.318	ENSSPAG00000016892	dbr1	99	56.757	Stegastes_partitus
ENSBTAG00000019949	DBR1	100	92.463	ENSSSCG00000031098	DBR1	100	92.463	Sus_scrofa
ENSBTAG00000019949	DBR1	96	69.886	ENSTGUG00000007073	DBR1	99	69.886	Taeniopygia_guttata
ENSBTAG00000019949	DBR1	99	53.805	ENSTRUG00000021594	dbr1	98	53.805	Takifugu_rubripes
ENSBTAG00000019949	DBR1	99	53.943	ENSTNIG00000006710	dbr1	99	54.480	Tetraodon_nigroviridis
ENSBTAG00000019949	DBR1	100	94.118	ENSTTRG00000004020	DBR1	100	94.118	Tursiops_truncatus
ENSBTAG00000019949	DBR1	100	89.154	ENSUAMG00000004639	DBR1	100	89.154	Ursus_americanus
ENSBTAG00000019949	DBR1	98	89.720	ENSUMAG00000015012	DBR1	100	89.522	Ursus_maritimus
ENSBTAG00000019949	DBR1	100	87.132	ENSVPAG00000011711	DBR1	100	87.132	Vicugna_pacos
ENSBTAG00000019949	DBR1	98	89.346	ENSVVUG00000026604	DBR1	100	89.154	Vulpes_vulpes
ENSBTAG00000019949	DBR1	99	64.954	ENSXETG00000027491	dbr1	99	64.954	Xenopus_tropicalis
ENSBTAG00000019949	DBR1	99	55.091	ENSXCOG00000018078	dbr1	99	55.455	Xiphophorus_couchianus
ENSBTAG00000019949	DBR1	99	55.191	ENSXMAG00000007311	dbr1	99	55.373	Xiphophorus_maculatus