EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000020149 (Gene tree)
Gene ID: 509258
Gene Symbol: RNASEH2B
Alias: -
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 76692 bases
Position: chr12:20346401-20423092
Accession: 509258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000066367	RNase_H2-Ydr279	PF09468.10	2.4e-15	1	1
ENSBTAP00000026838	RNase_H2-Ydr279	PF09468.10	5.3e-15	1	1
ENSBTAP00000064504	RNase_H2-Ydr279	PF09468.10	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000026838	-	2066	-	ENSBTAP00000026838	309 (aa)	-	Q3ZBI3
ENSBTAT00000077051	-	2106	-	ENSBTAP00000066367	284 (aa)	-	-
ENSBTAT00000075284	-	924	-	ENSBTAP00000064504	307 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000020149's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000020149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000020149	RNASEH2B	99	83.442	ENSG00000136104	RNASEH2B	97	90.164	Homo_sapiens
ENSBTAG00000020149	RNASEH2B	90	50.896	ENSAPOG00000010496	rnaseh2b	90	50.896	Acanthochromis_polyacanthus
ENSBTAG00000020149	RNASEH2B	94	82.712	ENSAMEG00000012040	RNASEH2B	99	82.712	Ailuropoda_melanoleuca
ENSBTAG00000020149	RNASEH2B	83	47.876	ENSACIG00000021991	rnaseh2b	95	48.990	Amphilophus_citrinellus
ENSBTAG00000020149	RNASEH2B	90	50.538	ENSAOCG00000013398	rnaseh2b	90	50.538	Amphiprion_ocellaris
ENSBTAG00000020149	RNASEH2B	90	50.179	ENSAPEG00000006033	rnaseh2b	90	50.179	Amphiprion_percula
ENSBTAG00000020149	RNASEH2B	90	51.971	ENSATEG00000008370	rnaseh2b	90	51.971	Anabas_testudineus
ENSBTAG00000020149	RNASEH2B	84	62.934	ENSAPLG00000008955	RNASEH2B	98	63.197	Anas_platyrhynchos
ENSBTAG00000020149	RNASEH2B	93	55.208	ENSACAG00000011679	RNASEH2B	96	55.208	Anolis_carolinensis
ENSBTAG00000020149	RNASEH2B	99	83.117	ENSANAG00000020662	RNASEH2B	99	83.117	Aotus_nancymaae
ENSBTAG00000020149	RNASEH2B	90	48.746	ENSACLG00000000467	rnaseh2b	90	48.746	Astatotilapia_calliptera
ENSBTAG00000020149	RNASEH2B	87	52.788	ENSAMXG00000014351	rnaseh2b	87	52.788	Astyanax_mexicanus
ENSBTAG00000020149	RNASEH2B	98	83.553	ENSCJAG00000008585	-	99	83.553	Callithrix_jacchus
ENSBTAG00000020149	RNASEH2B	88	80.000	ENSCJAG00000003822	-	92	80.000	Callithrix_jacchus
ENSBTAG00000020149	RNASEH2B	95	81.570	ENSCAFG00000004295	RNASEH2B	93	81.882	Canis_familiaris
ENSBTAG00000020149	RNASEH2B	98	81.518	ENSCAFG00020000250	RNASEH2B	98	81.518	Canis_lupus_dingo
ENSBTAG00000020149	RNASEH2B	78	81.328	ENSCHIG00000012982	-	84	81.328	Capra_hircus
ENSBTAG00000020149	RNASEH2B	100	95.146	ENSCHIG00000018220	RNASEH2B	100	95.146	Capra_hircus
ENSBTAG00000020149	RNASEH2B	97	70.333	ENSTSYG00000031177	-	98	70.333	Carlito_syrichta
ENSBTAG00000020149	RNASEH2B	94	82.131	ENSTSYG00000009176	-	94	82.131	Carlito_syrichta
ENSBTAG00000020149	RNASEH2B	92	72.474	ENSCAPG00000009978	RNASEH2B	96	72.917	Cavia_aperea
ENSBTAG00000020149	RNASEH2B	95	80.000	ENSCPOG00000032527	RNASEH2B	99	78.641	Cavia_porcellus
ENSBTAG00000020149	RNASEH2B	99	82.792	ENSCCAG00000026979	RNASEH2B	99	83.224	Cebus_capucinus
ENSBTAG00000020149	RNASEH2B	96	85.473	ENSCATG00000031336	RNASEH2B	83	85.473	Cercocebus_atys
ENSBTAG00000020149	RNASEH2B	93	81.469	ENSCLAG00000003517	RNASEH2B	78	81.469	Chinchilla_lanigera
ENSBTAG00000020149	RNASEH2B	97	83.882	ENSCSAG00000017701	RNASEH2B	91	83.882	Chlorocebus_sabaeus
ENSBTAG00000020149	RNASEH2B	98	66.013	ENSCHOG00000013688	RNASEH2B	100	64.725	Choloepus_hoffmanni
ENSBTAG00000020149	RNASEH2B	94	57.931	ENSCPBG00000008684	RNASEH2B	89	57.931	Chrysemys_picta_bellii
ENSBTAG00000020149	RNASEH2B	94	36.039	ENSCING00000016454	-	96	35.430	Ciona_intestinalis
ENSBTAG00000020149	RNASEH2B	99	84.244	ENSCANG00000041511	-	99	84.244	Colobus_angolensis_palliatus
ENSBTAG00000020149	RNASEH2B	99	80.782	ENSCGRG00001000611	Rnaseh2b	99	80.782	Cricetulus_griseus_chok1gshd
ENSBTAG00000020149	RNASEH2B	99	80.782	ENSCGRG00000006077	Rnaseh2b	99	80.782	Cricetulus_griseus_crigri
ENSBTAG00000020149	RNASEH2B	87	50.741	ENSCSEG00000004910	rnaseh2b	86	53.036	Cynoglossus_semilaevis
ENSBTAG00000020149	RNASEH2B	90	49.104	ENSCVAG00000005212	rnaseh2b	90	49.104	Cyprinodon_variegatus
ENSBTAG00000020149	RNASEH2B	93	49.135	ENSDARG00000005128	rnaseh2b	93	49.135	Danio_rerio
ENSBTAG00000020149	RNASEH2B	100	71.521	ENSDNOG00000034290	-	99	71.521	Dasypus_novemcinctus
ENSBTAG00000020149	RNASEH2B	92	73.684	ENSDNOG00000049666	-	92	73.684	Dasypus_novemcinctus
ENSBTAG00000020149	RNASEH2B	99	81.169	ENSDORG00000010708	Rnaseh2b	99	81.169	Dipodomys_ordii
ENSBTAG00000020149	RNASEH2B	84	38.314	ENSEBUG00000005965	rnaseh2b	98	39.080	Eptatretus_burgeri
ENSBTAG00000020149	RNASEH2B	99	84.091	ENSEASG00005017323	RNASEH2B	99	84.091	Equus_asinus_asinus
ENSBTAG00000020149	RNASEH2B	100	83.099	ENSECAG00000014262	RNASEH2B	100	83.099	Equus_caballus
ENSBTAG00000020149	RNASEH2B	90	49.643	ENSELUG00000019560	rnaseh2b	89	49.643	Esox_lucius
ENSBTAG00000020149	RNASEH2B	94	85.223	ENSFCAG00000014257	RNASEH2B	90	85.223	Felis_catus
ENSBTAG00000020149	RNASEH2B	90	59.498	ENSFALG00000008435	RNASEH2B	94	59.498	Ficedula_albicollis
ENSBTAG00000020149	RNASEH2B	93	80.420	ENSFDAG00000009920	RNASEH2B	99	80.420	Fukomys_damarensis
ENSBTAG00000020149	RNASEH2B	90	49.643	ENSFHEG00000012160	rnaseh2b	90	49.643	Fundulus_heteroclitus
ENSBTAG00000020149	RNASEH2B	83	49.808	ENSGMOG00000016830	rnaseh2b	90	49.808	Gadus_morhua
ENSBTAG00000020149	RNASEH2B	92	59.298	ENSGALG00000017015	RNASEH2B	95	59.661	Gallus_gallus
ENSBTAG00000020149	RNASEH2B	87	51.673	ENSGAFG00000021222	rnaseh2b	87	51.673	Gambusia_affinis
ENSBTAG00000020149	RNASEH2B	90	51.590	ENSGACG00000002821	rnaseh2b	90	51.590	Gasterosteus_aculeatus
ENSBTAG00000020149	RNASEH2B	88	59.410	ENSGAGG00000014722	RNASEH2B	96	59.410	Gopherus_agassizii
ENSBTAG00000020149	RNASEH2B	99	83.601	ENSGGOG00000001044	RNASEH2B	99	83.601	Gorilla_gorilla
ENSBTAG00000020149	RNASEH2B	90	49.104	ENSHBUG00000006049	rnaseh2b	90	49.104	Haplochromis_burtoni
ENSBTAG00000020149	RNASEH2B	93	81.533	ENSHGLG00100015953	RNASEH2B	97	81.533	Heterocephalus_glaber_male
ENSBTAG00000020149	RNASEH2B	90	46.454	ENSHCOG00000003318	rnaseh2b	90	46.290	Hippocampus_comes
ENSBTAG00000020149	RNASEH2B	87	52.399	ENSIPUG00000023815	rnaseh2b	87	52.399	Ictalurus_punctatus
ENSBTAG00000020149	RNASEH2B	93	83.217	ENSSTOG00000015126	RNASEH2B	97	83.217	Ictidomys_tridecemlineatus
ENSBTAG00000020149	RNASEH2B	95	78.498	ENSJJAG00000013335	Rnaseh2b	97	78.498	Jaculus_jaculus
ENSBTAG00000020149	RNASEH2B	90	50.357	ENSKMAG00000002198	rnaseh2b	90	50.357	Kryptolebias_marmoratus
ENSBTAG00000020149	RNASEH2B	90	53.047	ENSLBEG00000019331	rnaseh2b	90	53.047	Labrus_bergylta
ENSBTAG00000020149	RNASEH2B	69	56.542	ENSLACG00000010782	RNASEH2B	90	56.889	Latimeria_chalumnae
ENSBTAG00000020149	RNASEH2B	94	52.397	ENSLOCG00000009296	rnaseh2b	93	52.397	Lepisosteus_oculatus
ENSBTAG00000020149	RNASEH2B	98	75.410	ENSLAFG00000030158	RNASEH2B	98	75.410	Loxodonta_africana
ENSBTAG00000020149	RNASEH2B	99	84.691	ENSMFAG00000038464	-	98	84.691	Macaca_fascicularis
ENSBTAG00000020149	RNASEH2B	99	76.221	ENSMMUG00000021746	RNASEH2B	97	84.739	Macaca_mulatta
ENSBTAG00000020149	RNASEH2B	99	84.691	ENSMNEG00000030580	RNASEH2B	98	84.691	Macaca_nemestrina
ENSBTAG00000020149	RNASEH2B	99	83.871	ENSMLEG00000043911	-	98	83.871	Mandrillus_leucophaeus
ENSBTAG00000020149	RNASEH2B	90	51.064	ENSMAMG00000017109	rnaseh2b	90	51.064	Mastacembelus_armatus
ENSBTAG00000020149	RNASEH2B	85	49.242	ENSMZEG00005021926	rnaseh2b	86	49.242	Maylandia_zebra
ENSBTAG00000020149	RNASEH2B	88	59.124	ENSMGAG00000015025	RNASEH2B	98	59.507	Meleagris_gallopavo
ENSBTAG00000020149	RNASEH2B	99	79.479	ENSMAUG00000016520	Rnaseh2b	99	79.479	Mesocricetus_auratus
ENSBTAG00000020149	RNASEH2B	99	83.388	ENSMICG00000000528	RNASEH2B	99	83.388	Microcebus_murinus
ENSBTAG00000020149	RNASEH2B	90	50.179	ENSMMOG00000019799	rnaseh2b	96	50.179	Mola_mola
ENSBTAG00000020149	RNASEH2B	94	62.069	ENSMODG00000010775	RNASEH2B	94	62.069	Monodelphis_domestica
ENSBTAG00000020149	RNASEH2B	90	50.538	ENSMALG00000004463	rnaseh2b	90	50.538	Monopterus_albus
ENSBTAG00000020149	RNASEH2B	99	68.182	MGP_CAROLIEiJ_G0019389	Rnaseh2b	99	68.506	Mus_caroli
ENSBTAG00000020149	RNASEH2B	99	79.545	ENSMUSG00000021932	Rnaseh2b	99	79.870	Mus_musculus
ENSBTAG00000020149	RNASEH2B	99	62.931	MGP_PahariEiJ_G0030407	-	76	81.761	Mus_pahari
ENSBTAG00000020149	RNASEH2B	93	74.905	ENSMPUG00000018010	RNASEH2B	95	82.895	Mustela_putorius_furo
ENSBTAG00000020149	RNASEH2B	99	84.091	ENSMLUG00000004065	-	99	84.091	Myotis_lucifugus
ENSBTAG00000020149	RNASEH2B	90	49.110	ENSNBRG00000003253	rnaseh2b	90	49.110	Neolamprologus_brichardi
ENSBTAG00000020149	RNASEH2B	99	82.637	ENSNLEG00000003804	RNASEH2B	99	82.637	Nomascus_leucogenys
ENSBTAG00000020149	RNASEH2B	89	62.230	ENSMEUG00000003665	RNASEH2B	95	62.230	Notamacropus_eugenii
ENSBTAG00000020149	RNASEH2B	50	82.692	ENSOPRG00000003695	-	77	62.602	Ochotona_princeps
ENSBTAG00000020149	RNASEH2B	99	80.656	ENSODEG00000006793	-	98	80.656	Octodon_degus
ENSBTAG00000020149	RNASEH2B	87	73.684	ENSODEG00000005412	-	97	73.684	Octodon_degus
ENSBTAG00000020149	RNASEH2B	90	46.996	ENSONIG00000006657	rnaseh2b	90	48.029	Oreochromis_niloticus
ENSBTAG00000020149	RNASEH2B	91	63.066	ENSOANG00000015537	RNASEH2B	98	63.066	Ornithorhynchus_anatinus
ENSBTAG00000020149	RNASEH2B	100	81.877	ENSOCUG00000008904	RNASEH2B	97	81.877	Oryctolagus_cuniculus
ENSBTAG00000020149	RNASEH2B	93	50.865	ENSORLG00000011850	rnaseh2b	94	50.519	Oryzias_latipes
ENSBTAG00000020149	RNASEH2B	95	51.020	ENSORLG00020012081	rnaseh2b	94	50.865	Oryzias_latipes_hni
ENSBTAG00000020149	RNASEH2B	95	51.020	ENSORLG00015015468	rnaseh2b	94	50.865	Oryzias_latipes_hsok
ENSBTAG00000020149	RNASEH2B	95	48.649	ENSOMEG00000012441	rnaseh2b	95	48.136	Oryzias_melastigma
ENSBTAG00000020149	RNASEH2B	95	80.201	ENSOGAG00000016486	RNASEH2B	99	80.201	Otolemur_garnettii
ENSBTAG00000020149	RNASEH2B	94	93.836	ENSOARG00000008701	RNASEH2B	98	93.836	Ovis_aries
ENSBTAG00000020149	RNASEH2B	90	84.342	ENSPPAG00000026374	RNASEH2B	96	83.784	Pan_paniscus
ENSBTAG00000020149	RNASEH2B	98	83.388	ENSPPRG00000012450	RNASEH2B	99	83.388	Panthera_pardus
ENSBTAG00000020149	RNASEH2B	90	84.397	ENSPTIG00000013918	RNASEH2B	99	84.397	Panthera_tigris_altaica
ENSBTAG00000020149	RNASEH2B	99	82.958	ENSPTRG00000005886	RNASEH2B	98	84.342	Pan_troglodytes
ENSBTAG00000020149	RNASEH2B	99	84.194	ENSPANG00000022424	-	98	84.194	Papio_anubis
ENSBTAG00000020149	RNASEH2B	95	47.475	ENSPKIG00000013386	rnaseh2b	94	47.475	Paramormyrops_kingsleyae
ENSBTAG00000020149	RNASEH2B	68	50.777	ENSPSIG00000002224	RNASEH2B	89	50.777	Pelodiscus_sinensis
ENSBTAG00000020149	RNASEH2B	62	54.592	ENSPMGG00000010299	rnaseh2b	94	53.571	Periophthalmus_magnuspinnatus
ENSBTAG00000020149	RNASEH2B	99	80.782	ENSPEMG00000019721	Rnaseh2b	99	80.782	Peromyscus_maniculatus_bairdii
ENSBTAG00000020149	RNASEH2B	92	59.387	ENSPCIG00000014535	-	93	56.989	Phascolarctos_cinereus
ENSBTAG00000020149	RNASEH2B	87	52.206	ENSPFOG00000016722	rnaseh2b	87	52.206	Poecilia_formosa
ENSBTAG00000020149	RNASEH2B	87	52.593	ENSPLAG00000011755	rnaseh2b	87	52.593	Poecilia_latipinna
ENSBTAG00000020149	RNASEH2B	87	52.593	ENSPMEG00000002721	rnaseh2b	87	52.593	Poecilia_mexicana
ENSBTAG00000020149	RNASEH2B	87	52.593	ENSPREG00000007737	rnaseh2b	87	52.593	Poecilia_reticulata
ENSBTAG00000020149	RNASEH2B	99	82.637	ENSPPYG00000005378	RNASEH2B	99	81.994	Pongo_abelii
ENSBTAG00000020149	RNASEH2B	99	83.766	ENSPCOG00000026623	RNASEH2B	99	83.766	Propithecus_coquereli
ENSBTAG00000020149	RNASEH2B	89	82.031	ENSPVAG00000000508	RNASEH2B	99	78.467	Pteropus_vampyrus
ENSBTAG00000020149	RNASEH2B	90	49.104	ENSPNYG00000013552	rnaseh2b	90	49.104	Pundamilia_nyererei
ENSBTAG00000020149	RNASEH2B	87	51.111	ENSPNAG00000024825	rnaseh2b	86	51.111	Pygocentrus_nattereri
ENSBTAG00000020149	RNASEH2B	99	78.827	ENSRNOG00000009192	Rnaseh2b	99	78.827	Rattus_norvegicus
ENSBTAG00000020149	RNASEH2B	99	84.091	ENSRBIG00000028928	-	99	84.091	Rhinopithecus_bieti
ENSBTAG00000020149	RNASEH2B	97	70.569	ENSRBIG00000036017	-	97	70.569	Rhinopithecus_bieti
ENSBTAG00000020149	RNASEH2B	99	84.091	ENSRROG00000018808	-	99	84.091	Rhinopithecus_roxellana
ENSBTAG00000020149	RNASEH2B	87	67.339	ENSRROG00000044915	-	92	67.339	Rhinopithecus_roxellana
ENSBTAG00000020149	RNASEH2B	98	83.882	ENSSBOG00000008081	RNASEH2B	99	84.892	Saimiri_boliviensis_boliviensis
ENSBTAG00000020149	RNASEH2B	94	63.103	ENSSHAG00000016190	RNASEH2B	94	63.103	Sarcophilus_harrisii
ENSBTAG00000020149	RNASEH2B	87	51.852	ENSSFOG00015010190	rnaseh2b	87	51.852	Scleropages_formosus
ENSBTAG00000020149	RNASEH2B	90	50.000	ENSSMAG00000001546	rnaseh2b	90	50.000	Scophthalmus_maximus
ENSBTAG00000020149	RNASEH2B	90	51.254	ENSSDUG00000007567	rnaseh2b	90	51.254	Seriola_dumerili
ENSBTAG00000020149	RNASEH2B	90	52.688	ENSSLDG00000012485	rnaseh2b	90	52.688	Seriola_lalandi_dorsalis
ENSBTAG00000020149	RNASEH2B	84	58.779	ENSSPUG00000006745	-	94	58.779	Sphenodon_punctatus
ENSBTAG00000020149	RNASEH2B	90	50.896	ENSSPAG00000020926	rnaseh2b	90	50.896	Stegastes_partitus
ENSBTAG00000020149	RNASEH2B	98	84.588	ENSSSCG00000024385	RNASEH2B	99	87.050	Sus_scrofa
ENSBTAG00000020149	RNASEH2B	87	60.967	ENSTGUG00000012104	RNASEH2B	98	60.967	Taeniopygia_guttata
ENSBTAG00000020149	RNASEH2B	92	51.228	ENSTRUG00000015098	rnaseh2b	90	51.786	Takifugu_rubripes
ENSBTAG00000020149	RNASEH2B	87	52.788	ENSTNIG00000013861	rnaseh2b	87	52.788	Tetraodon_nigroviridis
ENSBTAG00000020149	RNASEH2B	93	81.661	ENSTTRG00000010761	RNASEH2B	98	77.742	Tursiops_truncatus
ENSBTAG00000020149	RNASEH2B	93	85.315	ENSUAMG00000022849	RNASEH2B	99	85.199	Ursus_americanus
ENSBTAG00000020149	RNASEH2B	93	84.615	ENSUMAG00000018556	RNASEH2B	99	84.477	Ursus_maritimus
ENSBTAG00000020149	RNASEH2B	93	88.153	ENSVPAG00000005679	RNASEH2B	99	88.153	Vicugna_pacos
ENSBTAG00000020149	RNASEH2B	93	82.230	ENSVVUG00000024015	RNASEH2B	85	82.230	Vulpes_vulpes
ENSBTAG00000020149	RNASEH2B	98	54.098	ENSXETG00000020720	rnaseh2b	98	54.098	Xenopus_tropicalis
ENSBTAG00000020149	RNASEH2B	87	52.416	ENSXCOG00000018732	rnaseh2b	87	52.416	Xiphophorus_couchianus
ENSBTAG00000020149	RNASEH2B	87	52.045	ENSXMAG00000022554	rnaseh2b	87	52.045	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0006401	RNA catabolic process	-	ISS	Process
GO:0032299	ribonuclease H2 complex	-	ISS	Component
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process