EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000020301 (Gene tree)
Gene ID: 534148
Gene Symbol: BLM
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 93153 bases
Position: chr21:21840568-21933720
Accession: 57310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000027057	HRDC	PF00570.23	7.7e-12	1	1
ENSBTAP00000027057	BDHCT	PF08072.11	5.8e-21	1	1
ENSBTAP00000027057	DEAD	PF00270.29	3.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000027057	-	4815	XM_010816994	ENSBTAP00000027057	1317 (aa)	XP_010815296	E1BQ04

Gene Model

Click here to download ENSBTAG00000020301's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03440	Homologous recombination	KEGG
bta03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000020301's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000020301	BLM	100	84.718	ENSG00000197299	BLM	93	84.211	Homo_sapiens
ENSBTAG00000020301	BLM	51	79.675	ENSAPOG00000017966	blm	50	79.675	Acanthochromis_polyacanthus
ENSBTAG00000020301	BLM	100	85.526	ENSAMEG00000013843	BLM	93	85.526	Ailuropoda_melanoleuca
ENSBTAG00000020301	BLM	60	79.404	ENSACIG00000023762	blm	57	79.404	Amphilophus_citrinellus
ENSBTAG00000020301	BLM	56	79.133	ENSAPEG00000018105	blm	53	79.133	Amphiprion_percula
ENSBTAG00000020301	BLM	82	80.488	ENSATEG00000006421	blm	77	80.488	Anabas_testudineus
ENSBTAG00000020301	BLM	80	59.283	ENSAPLG00000006878	BLM	89	59.547	Anas_platyrhynchos
ENSBTAG00000020301	BLM	51	81.365	ENSACAG00000014275	BLM	50	80.940	Anolis_carolinensis
ENSBTAG00000020301	BLM	100	82.060	ENSANAG00000038415	BLM	93	81.579	Aotus_nancymaae
ENSBTAG00000020301	BLM	86	72.664	ENSACLG00000020354	blm	80	72.664	Astatotilapia_calliptera
ENSBTAG00000020301	BLM	54	70.312	ENSAMXG00000016970	blm	58	70.312	Astyanax_mexicanus
ENSBTAG00000020301	BLM	100	82.392	ENSCJAG00000009803	BLM	93	81.908	Callithrix_jacchus
ENSBTAG00000020301	BLM	100	84.262	ENSCAFG00000012385	BLM	93	84.262	Canis_familiaris
ENSBTAG00000020301	BLM	100	84.262	ENSCAFG00020016111	BLM	81	96.316	Canis_lupus_dingo
ENSBTAG00000020301	BLM	100	95.597	ENSCHIG00000010329	BLM	100	95.596	Capra_hircus
ENSBTAG00000020301	BLM	100	78.341	ENSTSYG00000012368	BLM	95	78.439	Carlito_syrichta
ENSBTAG00000020301	BLM	86	83.852	ENSCAPG00000017976	BLM	91	83.721	Cavia_aperea
ENSBTAG00000020301	BLM	100	81.250	ENSCPOG00000001761	BLM	93	81.250	Cavia_porcellus
ENSBTAG00000020301	BLM	100	81.728	ENSCCAG00000023069	BLM	93	81.250	Cebus_capucinus
ENSBTAG00000020301	BLM	100	83.553	ENSCATG00000040609	BLM	92	93.261	Cercocebus_atys
ENSBTAG00000020301	BLM	100	80.731	ENSCLAG00000012111	BLM	93	80.263	Chinchilla_lanigera
ENSBTAG00000020301	BLM	100	83.224	ENSCSAG00000017040	BLM	93	83.224	Chlorocebus_sabaeus
ENSBTAG00000020301	BLM	91	94.118	ENSCHOG00000006255	BLM	86	91.429	Choloepus_hoffmanni
ENSBTAG00000020301	BLM	66	80.526	ENSCPBG00000025000	BLM	87	80.526	Chrysemys_picta_bellii
ENSBTAG00000020301	BLM	87	73.689	ENSCANG00000034808	BLM	100	73.522	Colobus_angolensis_palliatus
ENSBTAG00000020301	BLM	100	78.289	ENSCGRG00001024897	Blm	93	78.289	Cricetulus_griseus_chok1gshd
ENSBTAG00000020301	BLM	73	71.399	ENSCGRG00000016261	Blm	96	72.021	Cricetulus_griseus_crigri
ENSBTAG00000020301	BLM	99	50.794	ENSDARG00000077089	blm	53	68.928	Danio_rerio
ENSBTAG00000020301	BLM	99	81.518	ENSDNOG00000010159	BLM	93	81.518	Dasypus_novemcinctus
ENSBTAG00000020301	BLM	72	78.241	ENSDORG00000011033	Blm	93	78.154	Dipodomys_ordii
ENSBTAG00000020301	BLM	79	71.552	ENSETEG00000015019	BLM	73	71.552	Echinops_telfairi
ENSBTAG00000020301	BLM	100	84.539	ENSEASG00005006727	BLM	93	84.539	Equus_asinus_asinus
ENSBTAG00000020301	BLM	100	84.539	ENSECAG00000011405	BLM	93	84.539	Equus_caballus
ENSBTAG00000020301	BLM	97	74.107	ENSEEUG00000001434	BLM	95	74.107	Erinaceus_europaeus
ENSBTAG00000020301	BLM	83	81.301	ENSELUG00000019098	blm	77	81.301	Esox_lucius
ENSBTAG00000020301	BLM	100	85.855	ENSFCAG00000006087	BLM	93	85.855	Felis_catus
ENSBTAG00000020301	BLM	57	71.429	ENSFALG00000010981	BLM	83	54.192	Ficedula_albicollis
ENSBTAG00000020301	BLM	100	61.135	ENSFDAG00000012658	BLM	100	60.991	Fukomys_damarensis
ENSBTAG00000020301	BLM	66	69.556	ENSFHEG00000002553	blm	58	71.795	Fundulus_heteroclitus
ENSBTAG00000020301	BLM	82	77.333	ENSGMOG00000016431	blm	86	67.749	Gadus_morhua
ENSBTAG00000020301	BLM	99	58.033	ENSGALG00000008256	BLM	92	58.416	Gallus_gallus
ENSBTAG00000020301	BLM	51	78.591	ENSGAFG00000001117	blm	51	78.591	Gambusia_affinis
ENSBTAG00000020301	BLM	65	66.189	ENSGACG00000010863	blm	81	80.791	Gasterosteus_aculeatus
ENSBTAG00000020301	BLM	87	58.523	ENSGAGG00000005383	BLM	85	78.372	Gopherus_agassizii
ENSBTAG00000020301	BLM	100	84.718	ENSGGOG00000007710	BLM	92	94.070	Gorilla_gorilla
ENSBTAG00000020301	BLM	86	72.664	ENSHBUG00000015943	blm	80	72.664	Haplochromis_burtoni
ENSBTAG00000020301	BLM	100	80.731	ENSHGLG00000013231	BLM	96	75.463	Heterocephalus_glaber_female
ENSBTAG00000020301	BLM	57	70.897	ENSHCOG00000011455	blm	72	72.390	Hippocampus_comes
ENSBTAG00000020301	BLM	57	69.032	ENSIPUG00000000529	blm	59	76.786	Ictalurus_punctatus
ENSBTAG00000020301	BLM	100	79.934	ENSSTOG00000005000	BLM	93	79.934	Ictidomys_tridecemlineatus
ENSBTAG00000020301	BLM	72	83.411	ENSJJAG00000016322	Blm	94	83.411	Jaculus_jaculus
ENSBTAG00000020301	BLM	55	76.169	ENSLACG00000006490	BLM	54	76.169	Latimeria_chalumnae
ENSBTAG00000020301	BLM	86	72.158	ENSLOCG00000014302	blm	79	72.158	Lepisosteus_oculatus
ENSBTAG00000020301	BLM	100	83.224	ENSMFAG00000042982	BLM	92	93.801	Macaca_fascicularis
ENSBTAG00000020301	BLM	100	83.553	ENSMMUG00000019526	BLM	92	93.801	Macaca_mulatta
ENSBTAG00000020301	BLM	99	82.566	ENSMNEG00000031251	BLM	92	93.531	Macaca_nemestrina
ENSBTAG00000020301	BLM	100	83.721	ENSMLEG00000032934	BLM	93	83.224	Mandrillus_leucophaeus
ENSBTAG00000020301	BLM	86	72.664	ENSMZEG00005022323	blm	62	72.664	Maylandia_zebra
ENSBTAG00000020301	BLM	100	79.070	ENSMAUG00000008953	Blm	93	78.618	Mesocricetus_auratus
ENSBTAG00000020301	BLM	100	84.385	ENSMICG00000034442	BLM	93	83.882	Microcebus_murinus
ENSBTAG00000020301	BLM	100	78.073	ENSMOCG00000016367	Blm	93	77.632	Microtus_ochrogaster
ENSBTAG00000020301	BLM	65	70.737	ENSMMOG00000006959	blm	80	70.737	Mola_mola
ENSBTAG00000020301	BLM	99	72.876	ENSMODG00000019449	BLM	93	72.459	Monodelphis_domestica
ENSBTAG00000020301	BLM	68	71.694	ENSMALG00000007323	blm	64	71.694	Monopterus_albus
ENSBTAG00000020301	BLM	100	78.289	MGP_CAROLIEiJ_G0029907	Blm	93	77.632	Mus_caroli
ENSBTAG00000020301	BLM	100	77.632	ENSMUSG00000030528	Blm	93	76.974	Mus_musculus
ENSBTAG00000020301	BLM	100	77.778	MGP_PahariEiJ_G0013129	Blm	93	77.778	Mus_pahari
ENSBTAG00000020301	BLM	100	78.618	MGP_SPRETEiJ_G0031009	Blm	93	77.961	Mus_spretus
ENSBTAG00000020301	BLM	83	83.333	ENSMPUG00000015657	BLM	90	83.333	Mustela_putorius_furo
ENSBTAG00000020301	BLM	100	78.363	ENSMLUG00000014697	BLM	95	78.058	Myotis_lucifugus
ENSBTAG00000020301	BLM	100	79.934	ENSNGAG00000001275	Blm	93	79.934	Nannospalax_galili
ENSBTAG00000020301	BLM	86	72.706	ENSNBRG00000019702	blm	57	80.217	Neolamprologus_brichardi
ENSBTAG00000020301	BLM	100	83.389	ENSNLEG00000012087	BLM	93	82.895	Nomascus_leucogenys
ENSBTAG00000020301	BLM	99	68.182	ENSMEUG00000007253	BLM	92	67.857	Notamacropus_eugenii
ENSBTAG00000020301	BLM	95	95.268	ENSOPRG00000011667	BLM	90	94.671	Ochotona_princeps
ENSBTAG00000020301	BLM	72	80.399	ENSODEG00000015373	BLM	93	79.934	Octodon_degus
ENSBTAG00000020301	BLM	86	72.146	ENSONIG00000015193	blm	81	72.146	Oreochromis_niloticus
ENSBTAG00000020301	BLM	99	75.920	ENSOCUG00000013969	BLM	93	75.497	Oryctolagus_cuniculus
ENSBTAG00000020301	BLM	86	72.897	ENSORLG00000008110	blm	80	72.897	Oryzias_latipes
ENSBTAG00000020301	BLM	86	72.897	ENSORLG00020004812	blm	80	72.897	Oryzias_latipes_hni
ENSBTAG00000020301	BLM	86	64.953	ENSORLG00015018640	blm	68	80.000	Oryzias_latipes_hsok
ENSBTAG00000020301	BLM	100	76.023	ENSOGAG00000005708	BLM	95	75.973	Otolemur_garnettii
ENSBTAG00000020301	BLM	100	95.010	ENSOARG00000012875	BLM	93	94.824	Ovis_aries
ENSBTAG00000020301	BLM	100	84.053	ENSPPAG00000032173	BLM	93	83.553	Pan_paniscus
ENSBTAG00000020301	BLM	100	85.855	ENSPPRG00000002471	BLM	93	85.855	Panthera_pardus
ENSBTAG00000020301	BLM	100	84.211	ENSPTIG00000016168	BLM	93	84.211	Panthera_tigris_altaica
ENSBTAG00000020301	BLM	100	84.053	ENSPTRG00000007460	BLM	93	83.553	Pan_troglodytes
ENSBTAG00000020301	BLM	100	83.721	ENSPANG00000018572	BLM	92	93.531	Papio_anubis
ENSBTAG00000020301	BLM	86	71.560	ENSPKIG00000008954	blm	79	71.560	Paramormyrops_kingsleyae
ENSBTAG00000020301	BLM	100	79.344	ENSPEMG00000017348	Blm	93	78.689	Peromyscus_maniculatus_bairdii
ENSBTAG00000020301	BLM	99	71.287	ENSPCIG00000006609	BLM	93	70.164	Phascolarctos_cinereus
ENSBTAG00000020301	BLM	100	83.553	ENSPPYG00000006784	BLM	93	83.553	Pongo_abelii
ENSBTAG00000020301	BLM	70	93.939	ENSPCAG00000008960	BLM	65	93.939	Procavia_capensis
ENSBTAG00000020301	BLM	96	84.211	ENSPCOG00000000439	BLM	92	84.211	Propithecus_coquereli
ENSBTAG00000020301	BLM	81	100.000	ENSPVAG00000011642	BLM	80	95.806	Pteropus_vampyrus
ENSBTAG00000020301	BLM	86	50.346	ENSPNYG00000010956	blm	79	50.346	Pundamilia_nyererei
ENSBTAG00000020301	BLM	54	73.488	ENSPNAG00000011714	blm	60	72.172	Pygocentrus_nattereri
ENSBTAG00000020301	BLM	100	76.066	ENSRNOG00000011213	Blm	93	75.410	Rattus_norvegicus
ENSBTAG00000020301	BLM	100	84.385	ENSRBIG00000029656	BLM	92	92.453	Rhinopithecus_bieti
ENSBTAG00000020301	BLM	100	84.385	ENSRROG00000037871	BLM	92	92.453	Rhinopithecus_roxellana
ENSBTAG00000020301	BLM	100	72.184	ENSSBOG00000030957	BLM	100	72.260	Saimiri_boliviensis_boliviensis
ENSBTAG00000020301	BLM	99	64.118	ENSSHAG00000007988	BLM	95	64.118	Sarcophilus_harrisii
ENSBTAG00000020301	BLM	54	72.143	ENSSFOG00015015462	blm	58	72.143	Scleropages_formosus
ENSBTAG00000020301	BLM	68	70.439	ENSSMAG00000001120	blm	59	70.439	Scophthalmus_maximus
ENSBTAG00000020301	BLM	54	60.821	ENSSDUG00000010955	blm	58	60.821	Seriola_dumerili
ENSBTAG00000020301	BLM	55	71.562	ENSSLDG00000000634	blm	52	71.562	Seriola_lalandi_dorsalis
ENSBTAG00000020301	BLM	90	81.063	ENSSARG00000006398	BLM	87	80.592	Sorex_araneus
ENSBTAG00000020301	BLM	78	58.804	ENSSPUG00000000013	BLM	87	57.807	Sphenodon_punctatus
ENSBTAG00000020301	BLM	100	85.714	ENSSSCG00000001816	BLM	92	86.585	Sus_scrofa
ENSBTAG00000020301	BLM	77	55.204	ENSTGUG00000009959	-	63	74.099	Taeniopygia_guttata
ENSBTAG00000020301	BLM	78	49.674	ENSTRUG00000019860	blm	75	49.495	Takifugu_rubripes
ENSBTAG00000020301	BLM	72	78.591	ENSTNIG00000019246	blm	53	78.591	Tetraodon_nigroviridis
ENSBTAG00000020301	BLM	78	93.388	ENSTBEG00000006706	BLM	76	93.388	Tupaia_belangeri
ENSBTAG00000020301	BLM	100	89.145	ENSTTRG00000016386	BLM	93	89.145	Tursiops_truncatus
ENSBTAG00000020301	BLM	100	85.526	ENSUMAG00000009105	BLM	83	96.084	Ursus_maritimus
ENSBTAG00000020301	BLM	99	87.162	ENSVPAG00000000085	BLM	92	87.162	Vicugna_pacos
ENSBTAG00000020301	BLM	95	96.865	ENSVVUG00000006402	BLM	92	96.262	Vulpes_vulpes
ENSBTAG00000020301	BLM	99	56.250	ENSXETG00000007847	blm	74	31.776	Xenopus_tropicalis