EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000020398 (Gene tree)
Gene ID: 516516
Gene Symbol: TRMT12
Alias: -
Full Name: Bos taurus tRNA methyltransferase 12 homolog (TRMT12)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 1893 bases
Position: chr14:15616492-15618384
Accession: NM_001024552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000027186	Met_10	PF02475.16	1.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000027186	-	1893	-	ENSBTAP00000027186	462 (aa)	-	A6QQ88

Gene Model

Click here to download ENSBTAG00000020398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000020398's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000020398	TRMT12	97	83.669	ENSG00000183665	TRMT12	99	83.669	Homo_sapiens
ENSBTAG00000020398	TRMT12	89	51.332	ENSAPOG00000011979	trmt12	96	51.332	Acanthochromis_polyacanthus
ENSBTAG00000020398	TRMT12	97	86.607	ENSAMEG00000019612	TRMT12	100	86.607	Ailuropoda_melanoleuca
ENSBTAG00000020398	TRMT12	88	49.386	ENSACIG00000012982	trmt12	99	49.386	Amphilophus_citrinellus
ENSBTAG00000020398	TRMT12	88	51.589	ENSAOCG00000020570	trmt12	98	51.870	Amphiprion_ocellaris
ENSBTAG00000020398	TRMT12	88	51.961	ENSAPEG00000006335	trmt12	98	52.250	Amphiprion_percula
ENSBTAG00000020398	TRMT12	89	51.214	ENSATEG00000018316	trmt12	96	51.214	Anabas_testudineus
ENSBTAG00000020398	TRMT12	89	49.515	ENSACLG00000001008	trmt12	96	49.515	Astatotilapia_calliptera
ENSBTAG00000020398	TRMT12	90	52.758	ENSAMXG00000040366	trmt12	97	52.758	Astyanax_mexicanus
ENSBTAG00000020398	TRMT12	95	82.579	ENSCJAG00000022174	TRMT12	99	82.579	Callithrix_jacchus
ENSBTAG00000020398	TRMT12	95	85.649	ENSCAFG00000001040	TRMT12	100	85.649	Canis_familiaris
ENSBTAG00000020398	TRMT12	95	85.649	ENSCAFG00020006500	TRMT12	100	85.649	Canis_lupus_dingo
ENSBTAG00000020398	TRMT12	94	96.560	ENSCHIG00000016574	TRMT12	99	96.560	Capra_hircus
ENSBTAG00000020398	TRMT12	96	78.153	ENSCPOG00000026520	TRMT12	100	78.153	Cavia_porcellus
ENSBTAG00000020398	TRMT12	95	83.447	ENSCSAG00000018615	TRMT12	98	83.447	Chlorocebus_sabaeus
ENSBTAG00000020398	TRMT12	95	63.697	ENSCPBG00000014290	TRMT12	98	63.697	Chrysemys_picta_bellii
ENSBTAG00000020398	TRMT12	67	44.479	ENSCING00000019633	-	97	44.479	Ciona_intestinalis
ENSBTAG00000020398	TRMT12	69	47.188	ENSCSAVG00000000415	-	93	47.188	Ciona_savignyi
ENSBTAG00000020398	TRMT12	94	62.870	ENSCGRG00001014834	Trmt12	99	62.870	Cricetulus_griseus_chok1gshd
ENSBTAG00000020398	TRMT12	90	50.725	ENSCSEG00000002675	trmt12	92	50.725	Cynoglossus_semilaevis
ENSBTAG00000020398	TRMT12	90	49.640	ENSCVAG00000005590	trmt12	98	49.642	Cyprinodon_variegatus
ENSBTAG00000020398	TRMT12	90	50.240	ENSDARG00000060338	trmt12	97	50.240	Danio_rerio
ENSBTAG00000020398	TRMT12	96	76.286	ENSETEG00000009373	TRMT12	99	76.286	Echinops_telfairi
ENSBTAG00000020398	TRMT12	95	85.649	ENSEASG00005022441	TRMT12	100	85.649	Equus_asinus_asinus
ENSBTAG00000020398	TRMT12	96	78.104	ENSEEUG00000004844	TRMT12	99	78.104	Erinaceus_europaeus
ENSBTAG00000020398	TRMT12	90	49.639	ENSELUG00000004240	trmt12	99	50.508	Esox_lucius
ENSBTAG00000020398	TRMT12	61	63.793	ENSFALG00000003825	TRMT12	98	70.507	Ficedula_albicollis
ENSBTAG00000020398	TRMT12	95	82.460	ENSFDAG00000016647	TRMT12	100	82.460	Fukomys_damarensis
ENSBTAG00000020398	TRMT12	87	43.627	ENSFHEG00000017338	trmt12	98	43.627	Fundulus_heteroclitus
ENSBTAG00000020398	TRMT12	76	64.789	ENSGALG00000006773	TRMT12	76	64.789	Gallus_gallus
ENSBTAG00000020398	TRMT12	89	50.000	ENSGAFG00000020056	trmt12	96	50.000	Gambusia_affinis
ENSBTAG00000020398	TRMT12	84	51.680	ENSGACG00000017351	trmt12	100	50.488	Gasterosteus_aculeatus
ENSBTAG00000020398	TRMT12	94	63.657	ENSGAGG00000006032	TRMT12	99	63.657	Gopherus_agassizii
ENSBTAG00000020398	TRMT12	89	49.515	ENSHBUG00000016412	trmt12	96	49.515	Haplochromis_burtoni
ENSBTAG00000020398	TRMT12	95	81.050	ENSHGLG00000020498	TRMT12	99	81.050	Heterocephalus_glaber_female
ENSBTAG00000020398	TRMT12	95	81.050	ENSHGLG00100020132	TRMT12	99	81.050	Heterocephalus_glaber_male
ENSBTAG00000020398	TRMT12	89	49.515	ENSHCOG00000005050	trmt12	94	53.161	Hippocampus_comes
ENSBTAG00000020398	TRMT12	92	51.179	ENSIPUG00000018011	trmt12	91	51.179	Ictalurus_punctatus
ENSBTAG00000020398	TRMT12	94	82.488	ENSSTOG00000030617	TRMT12	98	82.488	Ictidomys_tridecemlineatus
ENSBTAG00000020398	TRMT12	89	50.725	ENSKMAG00000000891	trmt12	96	50.725	Kryptolebias_marmoratus
ENSBTAG00000020398	TRMT12	89	49.034	ENSLBEG00000028712	trmt12	96	49.034	Labrus_bergylta
ENSBTAG00000020398	TRMT12	52	57.083	ENSLBEG00000017456	-	88	57.500	Labrus_bergylta
ENSBTAG00000020398	TRMT12	94	56.463	ENSLACG00000015869	TRMT12	98	56.463	Latimeria_chalumnae
ENSBTAG00000020398	TRMT12	92	56.235	ENSLOCG00000015290	trmt12	99	56.235	Lepisosteus_oculatus
ENSBTAG00000020398	TRMT12	95	84.510	ENSLAFG00000012519	TRMT12	100	84.510	Loxodonta_africana
ENSBTAG00000020398	TRMT12	95	84.475	ENSMMUG00000015490	TRMT12	98	84.475	Macaca_mulatta
ENSBTAG00000020398	TRMT12	89	50.360	ENSMAMG00000020311	trmt12	97	50.360	Mastacembelus_armatus
ENSBTAG00000020398	TRMT12	89	49.515	ENSMZEG00005007349	trmt12	96	49.515	Maylandia_zebra
ENSBTAG00000020398	TRMT12	95	59.318	ENSMGAG00000004174	TRMT12	98	59.318	Meleagris_gallopavo
ENSBTAG00000020398	TRMT12	88	50.976	ENSMMOG00000000412	trmt12	95	50.976	Mola_mola
ENSBTAG00000020398	TRMT12	95	67.198	ENSMODG00000021403	-	98	67.198	Monodelphis_domestica
ENSBTAG00000020398	TRMT12	99	66.022	ENSMODG00000011798	-	95	66.022	Monodelphis_domestica
ENSBTAG00000020398	TRMT12	89	50.728	ENSMALG00000008668	trmt12	96	50.728	Monopterus_albus
ENSBTAG00000020398	TRMT12	93	80.974	MGP_CAROLIEiJ_G0019820	Trmt12	97	80.974	Mus_caroli
ENSBTAG00000020398	TRMT12	92	81.455	ENSMUSG00000037085	Trmt12	95	81.455	Mus_musculus
ENSBTAG00000020398	TRMT12	93	80.886	MGP_PahariEiJ_G0019829	Trmt12	96	80.886	Mus_pahari
ENSBTAG00000020398	TRMT12	92	81.221	MGP_SPRETEiJ_G0020717	Trmt12	95	81.221	Mus_spretus
ENSBTAG00000020398	TRMT12	96	85.650	ENSMPUG00000019150	TRMT12	100	85.650	Mustela_putorius_furo
ENSBTAG00000020398	TRMT12	95	84.738	ENSMLUG00000003753	TRMT12	100	84.738	Myotis_lucifugus
ENSBTAG00000020398	TRMT12	95	79.271	ENSNGAG00000014548	Trmt12	100	79.271	Nannospalax_galili
ENSBTAG00000020398	TRMT12	89	50.000	ENSNBRG00000021510	trmt12	96	50.000	Neolamprologus_brichardi
ENSBTAG00000020398	TRMT12	94	72.477	ENSOPRG00000008067	TRMT12	98	72.477	Ochotona_princeps
ENSBTAG00000020398	TRMT12	95	80.182	ENSODEG00000018933	TRMT12	100	80.182	Octodon_degus
ENSBTAG00000020398	TRMT12	89	50.725	ENSONIG00000002614	trmt12	96	50.725	Oreochromis_niloticus
ENSBTAG00000020398	TRMT12	93	65.421	ENSOANG00000009987	TRMT12	99	65.421	Ornithorhynchus_anatinus
ENSBTAG00000020398	TRMT12	94	78.571	ENSOCUG00000026379	TRMT12	97	78.571	Oryctolagus_cuniculus
ENSBTAG00000020398	TRMT12	89	51.208	ENSORLG00000001280	trmt12	96	51.449	Oryzias_latipes
ENSBTAG00000020398	TRMT12	89	51.208	ENSORLG00020000708	trmt12	96	51.449	Oryzias_latipes_hni
ENSBTAG00000020398	TRMT12	89	51.208	ENSORLG00015012344	trmt12	96	51.449	Oryzias_latipes_hsok
ENSBTAG00000020398	TRMT12	89	50.725	ENSOMEG00000015267	trmt12	95	50.725	Oryzias_melastigma
ENSBTAG00000020398	TRMT12	95	82.232	ENSOGAG00000015845	TRMT12	100	82.232	Otolemur_garnettii
ENSBTAG00000020398	TRMT12	92	55.294	ENSPKIG00000004640	trmt12	99	55.690	Paramormyrops_kingsleyae
ENSBTAG00000020398	TRMT12	56	67.910	ENSPSIG00000003476	TRMT12	99	67.910	Pelodiscus_sinensis
ENSBTAG00000020398	TRMT12	90	47.826	ENSPMGG00000016356	trmt12	94	47.826	Periophthalmus_magnuspinnatus
ENSBTAG00000020398	TRMT12	96	70.362	ENSPCIG00000002967	TRMT12	91	70.362	Phascolarctos_cinereus
ENSBTAG00000020398	TRMT12	92	48.000	ENSPFOG00000016931	trmt12	98	48.000	Poecilia_formosa
ENSBTAG00000020398	TRMT12	89	48.810	ENSPLAG00000020621	trmt12	96	48.810	Poecilia_latipinna
ENSBTAG00000020398	TRMT12	89	50.000	ENSPMEG00000000818	trmt12	96	50.000	Poecilia_mexicana
ENSBTAG00000020398	TRMT12	89	49.275	ENSPREG00000011621	trmt12	96	49.275	Poecilia_reticulata
ENSBTAG00000020398	TRMT12	95	84.163	ENSPPYG00000018866	TRMT12	99	84.163	Pongo_abelii
ENSBTAG00000020398	TRMT12	95	81.859	ENSPCAG00000000556	TRMT12	99	81.859	Procavia_capensis
ENSBTAG00000020398	TRMT12	95	84.091	ENSPVAG00000009149	TRMT12	99	84.091	Pteropus_vampyrus
ENSBTAG00000020398	TRMT12	88	49.510	ENSPNYG00000010696	trmt12	99	49.510	Pundamilia_nyererei
ENSBTAG00000020398	TRMT12	90	52.246	ENSPNAG00000019028	trmt12	97	52.246	Pygocentrus_nattereri
ENSBTAG00000020398	TRMT12	93	82.135	ENSRNOG00000008978	Trmt12	98	82.135	Rattus_norvegicus
ENSBTAG00000020398	TRMT12	96	68.100	ENSSHAG00000003345	TRMT12	99	68.100	Sarcophilus_harrisii
ENSBTAG00000020398	TRMT12	92	51.981	ENSSFOG00015006090	trmt12	99	51.981	Scleropages_formosus
ENSBTAG00000020398	TRMT12	89	50.725	ENSSMAG00000013247	trmt12	96	50.725	Scophthalmus_maximus
ENSBTAG00000020398	TRMT12	87	52.000	ENSSDUG00000006168	trmt12	94	52.000	Seriola_dumerili
ENSBTAG00000020398	TRMT12	89	51.214	ENSSLDG00000025007	trmt12	96	51.214	Seriola_lalandi_dorsalis
ENSBTAG00000020398	TRMT12	95	60.987	ENSSPUG00000005321	TRMT12	98	60.987	Sphenodon_punctatus
ENSBTAG00000020398	TRMT12	89	50.847	ENSSPAG00000009435	trmt12	93	50.847	Stegastes_partitus
ENSBTAG00000020398	TRMT12	92	57.870	ENSTGUG00000002280	TRMT12	99	58.741	Taeniopygia_guttata
ENSBTAG00000020398	TRMT12	91	50.000	ENSTRUG00000011548	trmt12	95	50.120	Takifugu_rubripes
ENSBTAG00000020398	TRMT12	90	50.119	ENSTNIG00000016866	trmt12	97	50.119	Tetraodon_nigroviridis
ENSBTAG00000020398	TRMT12	94	85.945	ENSUAMG00000002067	TRMT12	99	85.945	Ursus_americanus
ENSBTAG00000020398	TRMT12	95	87.783	ENSVPAG00000006519	TRMT12	99	87.783	Vicugna_pacos
ENSBTAG00000020398	TRMT12	93	85.417	ENSVVUG00000016790	TRMT12	97	85.417	Vulpes_vulpes
ENSBTAG00000020398	TRMT12	95	55.204	ENSXETG00000009641	trmt12	99	55.204	Xenopus_tropicalis
ENSBTAG00000020398	TRMT12	89	49.880	ENSXCOG00000016505	trmt12	99	47.653	Xiphophorus_couchianus
ENSBTAG00000020398	TRMT12	89	49.639	ENSXMAG00000025318	trmt12	96	49.639	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0102522	tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity	-	IEA	Function