EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000020633 (Gene tree)
Gene ID: 360191
Gene Symbol: NOB1
Alias: -
Full Name: Bos taurus NIN1 (RPN12) binding protein 1 homolog (NOB1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 16693 bases
Position: chr18:36812455-36829147
Accession: NM_183083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000027497	NOB1_Zn_bind	PF08772.11	8.3e-32	1	1
ENSBTAP00000070112	NOB1_Zn_bind	PF08772.11	8.3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000073783	-	1750	-	ENSBTAP00000070112	413 (aa)	-	UPI0000614B32
ENSBTAT00000027497	-	1741	-	ENSBTAP00000027497	413 (aa)	-	F1MDA9

Gene Model

Click here to download ENSBTAG00000020633's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000020633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000020633	NOB1	100	90.097	ENSG00000141101	NOB1	100	90.097	Homo_sapiens
ENSBTAG00000020633	NOB1	85	62.890	ENSAPOG00000008241	nob1	94	63.585	Acanthochromis_polyacanthus
ENSBTAG00000020633	NOB1	100	89.904	ENSAMEG00000006706	NOB1	99	89.904	Ailuropoda_melanoleuca
ENSBTAG00000020633	NOB1	99	62.619	ENSACIG00000001503	nob1	99	62.824	Amphilophus_citrinellus
ENSBTAG00000020633	NOB1	100	63.462	ENSAOCG00000006533	nob1	100	64.183	Amphiprion_ocellaris
ENSBTAG00000020633	NOB1	100	63.942	ENSAPEG00000000032	-	100	64.663	Amphiprion_percula
ENSBTAG00000020633	NOB1	100	63.942	ENSAPEG00000000029	nob1	100	64.663	Amphiprion_percula
ENSBTAG00000020633	NOB1	100	63.373	ENSATEG00000014585	nob1	100	64.096	Anabas_testudineus
ENSBTAG00000020633	NOB1	99	67.143	ENSACAG00000003697	NOB1	87	66.434	Anolis_carolinensis
ENSBTAG00000020633	NOB1	100	90.073	ENSANAG00000036611	NOB1	100	89.588	Aotus_nancymaae
ENSBTAG00000020633	NOB1	99	63.084	ENSACLG00000024897	nob1	99	63.023	Astatotilapia_calliptera
ENSBTAG00000020633	NOB1	95	57.377	ENSAMXG00000003642	nob1	100	58.974	Astyanax_mexicanus
ENSBTAG00000020633	NOB1	75	42.857	WBGene00021843	Y54E10BR.4	97	32.843	Caenorhabditis_elegans
ENSBTAG00000020633	NOB1	100	89.831	ENSCJAG00000015230	NOB1	100	89.346	Callithrix_jacchus
ENSBTAG00000020633	NOB1	100	90.821	ENSCAFG00000020251	NOB1	100	90.821	Canis_familiaris
ENSBTAG00000020633	NOB1	100	90.821	ENSCAFG00020020297	NOB1	100	90.821	Canis_lupus_dingo
ENSBTAG00000020633	NOB1	100	98.305	ENSCHIG00000027022	NOB1	100	98.305	Capra_hircus
ENSBTAG00000020633	NOB1	100	87.530	ENSTSYG00000003084	NOB1	100	88.010	Carlito_syrichta
ENSBTAG00000020633	NOB1	84	84.438	ENSCAPG00000015542	NOB1	100	85.057	Cavia_aperea
ENSBTAG00000020633	NOB1	100	85.714	ENSCPOG00000022538	NOB1	100	86.232	Cavia_porcellus
ENSBTAG00000020633	NOB1	100	90.144	ENSCCAG00000023773	NOB1	100	89.423	Cebus_capucinus
ENSBTAG00000020633	NOB1	100	89.372	ENSCATG00000039487	NOB1	100	89.372	Cercocebus_atys
ENSBTAG00000020633	NOB1	84	80.403	ENSCLAG00000005926	NOB1	100	81.268	Chinchilla_lanigera
ENSBTAG00000020633	NOB1	100	89.130	ENSCSAG00000004158	NOB1	100	89.372	Chlorocebus_sabaeus
ENSBTAG00000020633	NOB1	100	78.208	ENSCHOG00000011047	NOB1	100	78.208	Choloepus_hoffmanni
ENSBTAG00000020633	NOB1	100	71.596	ENSCPBG00000027035	NOB1	93	69.977	Chrysemys_picta_bellii
ENSBTAG00000020633	NOB1	99	48.357	ENSCING00000023441	-	99	49.880	Ciona_intestinalis
ENSBTAG00000020633	NOB1	99	46.189	ENSCSAVG00000009081	-	99	47.059	Ciona_savignyi
ENSBTAG00000020633	NOB1	100	87.893	ENSCGRG00001009255	Nob1	95	88.378	Cricetulus_griseus_chok1gshd
ENSBTAG00000020633	NOB1	100	87.893	ENSCGRG00000010869	Nob1	100	88.378	Cricetulus_griseus_crigri
ENSBTAG00000020633	NOB1	87	61.333	ENSCSEG00000019657	nob1	91	61.333	Cynoglossus_semilaevis
ENSBTAG00000020633	NOB1	99	59.633	ENSDARG00000016080	nob1	99	60.183	Danio_rerio
ENSBTAG00000020633	NOB1	100	87.409	ENSDNOG00000041643	NOB1	100	87.409	Dasypus_novemcinctus
ENSBTAG00000020633	NOB1	100	86.441	ENSDORG00000000483	Nob1	100	86.199	Dipodomys_ordii
ENSBTAG00000020633	NOB1	81	43.836	FBgn0030177	CG2972	98	35.560	Drosophila_melanogaster
ENSBTAG00000020633	NOB1	59	73.469	ENSETEG00000000011	-	58	74.286	Echinops_telfairi
ENSBTAG00000020633	NOB1	99	45.414	ENSEBUG00000004464	nob1	99	45.190	Eptatretus_burgeri
ENSBTAG00000020633	NOB1	100	93.510	ENSEASG00005021356	NOB1	84	93.750	Equus_asinus_asinus
ENSBTAG00000020633	NOB1	100	93.510	ENSECAG00000023748	NOB1	81	93.750	Equus_caballus
ENSBTAG00000020633	NOB1	68	73.333	ENSEEUG00000014384	NOB1	66	71.228	Erinaceus_europaeus
ENSBTAG00000020633	NOB1	99	61.048	ENSELUG00000016199	nob1	99	57.978	Esox_lucius
ENSBTAG00000020633	NOB1	100	91.787	ENSFCAG00000002958	NOB1	100	91.787	Felis_catus
ENSBTAG00000020633	NOB1	50	75.000	ENSFALG00000002747	NOB1	92	70.325	Ficedula_albicollis
ENSBTAG00000020633	NOB1	100	84.746	ENSFDAG00000009239	NOB1	100	84.746	Fukomys_damarensis
ENSBTAG00000020633	NOB1	62	57.414	ENSFHEG00000007657	nob1	58	63.948	Fundulus_heteroclitus
ENSBTAG00000020633	NOB1	99	62.990	ENSGMOG00000010638	nob1	98	63.971	Gadus_morhua
ENSBTAG00000020633	NOB1	100	64.554	ENSGALG00000000693	NOB1	100	62.989	Gallus_gallus
ENSBTAG00000020633	NOB1	100	57.849	ENSGAFG00000006104	nob1	100	57.849	Gambusia_affinis
ENSBTAG00000020633	NOB1	99	62.201	ENSGACG00000017552	nob1	99	62.530	Gasterosteus_aculeatus
ENSBTAG00000020633	NOB1	100	71.362	ENSGAGG00000003902	NOB1	100	69.746	Gopherus_agassizii
ENSBTAG00000020633	NOB1	100	90.580	ENSGGOG00000025456	NOB1	100	90.580	Gorilla_gorilla
ENSBTAG00000020633	NOB1	99	65.854	ENSHBUG00000002580	nob1	99	65.854	Haplochromis_burtoni
ENSBTAG00000020633	NOB1	100	86.232	ENSHGLG00000014260	NOB1	100	86.232	Heterocephalus_glaber_female
ENSBTAG00000020633	NOB1	100	86.232	ENSHGLG00100013978	NOB1	100	86.232	Heterocephalus_glaber_male
ENSBTAG00000020633	NOB1	99	60.817	ENSHCOG00000006699	nob1	99	60.817	Hippocampus_comes
ENSBTAG00000020633	NOB1	99	54.008	ENSIPUG00000007579	nob1	99	53.782	Ictalurus_punctatus
ENSBTAG00000020633	NOB1	100	88.620	ENSSTOG00000001204	NOB1	100	90.315	Ictidomys_tridecemlineatus
ENSBTAG00000020633	NOB1	100	87.167	ENSJJAG00000015543	Nob1	100	87.167	Jaculus_jaculus
ENSBTAG00000020633	NOB1	99	64.578	ENSKMAG00000018220	nob1	99	63.294	Kryptolebias_marmoratus
ENSBTAG00000020633	NOB1	100	65.385	ENSLBEG00000026375	nob1	100	65.625	Labrus_bergylta
ENSBTAG00000020633	NOB1	100	64.612	ENSLACG00000006973	NOB1	98	65.068	Latimeria_chalumnae
ENSBTAG00000020633	NOB1	99	60.403	ENSLOCG00000001411	nob1	99	60.444	Lepisosteus_oculatus
ENSBTAG00000020633	NOB1	100	89.157	ENSLAFG00000008978	NOB1	100	89.880	Loxodonta_africana
ENSBTAG00000020633	NOB1	100	89.588	ENSMFAG00000030131	NOB1	100	89.588	Macaca_fascicularis
ENSBTAG00000020633	NOB1	100	89.855	ENSMMUG00000006506	NOB1	100	90.097	Macaca_mulatta
ENSBTAG00000020633	NOB1	100	89.855	ENSMNEG00000028829	NOB1	100	82.609	Macaca_nemestrina
ENSBTAG00000020633	NOB1	100	89.855	ENSMLEG00000032913	NOB1	100	89.855	Mandrillus_leucophaeus
ENSBTAG00000020633	NOB1	99	65.122	ENSMZEG00005028346	nob1	99	64.878	Maylandia_zebra
ENSBTAG00000020633	NOB1	63	61.905	ENSMZEG00005003827	-	83	63.004	Maylandia_zebra
ENSBTAG00000020633	NOB1	64	69.630	ENSMGAG00000008675	NOB1	100	67.021	Meleagris_gallopavo
ENSBTAG00000020633	NOB1	100	85.956	ENSMAUG00000013554	Nob1	100	86.199	Mesocricetus_auratus
ENSBTAG00000020633	NOB1	100	91.525	ENSMICG00000012123	NOB1	100	91.525	Microcebus_murinus
ENSBTAG00000020633	NOB1	100	87.409	ENSMOCG00000010370	Nob1	100	88.378	Microtus_ochrogaster
ENSBTAG00000020633	NOB1	100	66.906	ENSMMOG00000002120	nob1	100	66.906	Mola_mola
ENSBTAG00000020633	NOB1	100	73.721	ENSMODG00000002677	NOB1	100	75.829	Monodelphis_domestica
ENSBTAG00000020633	NOB1	99	63.285	ENSMALG00000014580	nob1	100	64.251	Monopterus_albus
ENSBTAG00000020633	NOB1	100	85.472	MGP_CAROLIEiJ_G0031536	Nob1	98	85.230	Mus_caroli
ENSBTAG00000020633	NOB1	100	85.472	ENSMUSG00000003848	Nob1	100	85.230	Mus_musculus
ENSBTAG00000020633	NOB1	100	86.683	MGP_PahariEiJ_G0023136	Nob1	100	86.441	Mus_pahari
ENSBTAG00000020633	NOB1	100	85.714	MGP_SPRETEiJ_G0032654	Nob1	98	85.472	Mus_spretus
ENSBTAG00000020633	NOB1	100	88.889	ENSMPUG00000007483	NOB1	91	90.821	Mustela_putorius_furo
ENSBTAG00000020633	NOB1	100	90.315	ENSMLUG00000006667	NOB1	100	91.768	Myotis_lucifugus
ENSBTAG00000020633	NOB1	100	88.620	ENSNGAG00000008627	Nob1	100	87.893	Nannospalax_galili
ENSBTAG00000020633	NOB1	100	90.580	ENSNLEG00000005572	NOB1	100	90.580	Nomascus_leucogenys
ENSBTAG00000020633	NOB1	78	87.423	ENSOPRG00000006721	NOB1	100	86.850	Ochotona_princeps
ENSBTAG00000020633	NOB1	100	85.230	ENSODEG00000014376	NOB1	100	85.230	Octodon_degus
ENSBTAG00000020633	NOB1	99	61.224	ENSONIG00000003319	nob1	99	61.161	Oreochromis_niloticus
ENSBTAG00000020633	NOB1	84	86.494	ENSOCUG00000004400	NOB1	100	87.106	Oryctolagus_cuniculus
ENSBTAG00000020633	NOB1	100	63.942	ENSORLG00000018862	nob1	100	64.904	Oryzias_latipes
ENSBTAG00000020633	NOB1	100	64.269	ENSORLG00020014687	nob1	100	64.029	Oryzias_latipes_hni
ENSBTAG00000020633	NOB1	100	63.702	ENSORLG00015012156	nob1	100	64.904	Oryzias_latipes_hsok
ENSBTAG00000020633	NOB1	100	59.130	ENSOMEG00000022722	nob1	100	58.925	Oryzias_melastigma
ENSBTAG00000020633	NOB1	100	82.567	ENSOGAG00000004590	NOB1	100	83.816	Otolemur_garnettii
ENSBTAG00000020633	NOB1	100	97.337	ENSOARG00000003606	NOB1	100	97.337	Ovis_aries
ENSBTAG00000020633	NOB1	98	82.382	ENSPPAG00000003317	-	100	83.127	Pan_paniscus
ENSBTAG00000020633	NOB1	100	90.097	ENSPPAG00000040257	NOB1	100	90.097	Pan_paniscus
ENSBTAG00000020633	NOB1	100	91.304	ENSPPRG00000016949	NOB1	100	92.029	Panthera_pardus
ENSBTAG00000020633	NOB1	100	91.304	ENSPTIG00000011234	NOB1	100	92.029	Panthera_tigris_altaica
ENSBTAG00000020633	NOB1	100	90.338	ENSPTRG00000008285	NOB1	100	90.338	Pan_troglodytes
ENSBTAG00000020633	NOB1	100	90.821	ENSPANG00000015858	NOB1	100	90.097	Papio_anubis
ENSBTAG00000020633	NOB1	99	64.133	ENSPKIG00000020293	nob1	99	63.023	Paramormyrops_kingsleyae
ENSBTAG00000020633	NOB1	99	68.646	ENSPSIG00000012477	NOB1	98	69.188	Pelodiscus_sinensis
ENSBTAG00000020633	NOB1	99	60.964	ENSPMGG00000023476	nob1	100	62.319	Periophthalmus_magnuspinnatus
ENSBTAG00000020633	NOB1	100	86.715	ENSPEMG00000010995	Nob1	100	87.198	Peromyscus_maniculatus_bairdii
ENSBTAG00000020633	NOB1	84	61.433	ENSPFOG00000000027	nob1	100	62.259	Poecilia_formosa
ENSBTAG00000020633	NOB1	65	66.418	ENSPLAG00000011546	nob1	94	66.045	Poecilia_latipinna
ENSBTAG00000020633	NOB1	100	61.205	ENSPMEG00000023435	nob1	100	61.687	Poecilia_mexicana
ENSBTAG00000020633	NOB1	99	59.259	ENSPREG00000007675	nob1	100	59.041	Poecilia_reticulata
ENSBTAG00000020633	NOB1	100	91.525	ENSPPYG00000007509	NOB1	100	90.799	Pongo_abelii
ENSBTAG00000020633	NOB1	100	82.974	ENSPCAG00000001527	NOB1	100	83.933	Procavia_capensis
ENSBTAG00000020633	NOB1	100	91.525	ENSPCOG00000025515	NOB1	100	91.525	Propithecus_coquereli
ENSBTAG00000020633	NOB1	78	66.358	ENSPVAG00000013330	NOB1	78	65.432	Pteropus_vampyrus
ENSBTAG00000020633	NOB1	99	63.171	ENSPNYG00000018449	nob1	99	63.869	Pundamilia_nyererei
ENSBTAG00000020633	NOB1	99	56.552	ENSPNAG00000004244	nob1	99	58.219	Pygocentrus_nattereri
ENSBTAG00000020633	NOB1	100	87.409	ENSRNOG00000021890	Nob1	100	87.409	Rattus_norvegicus
ENSBTAG00000020633	NOB1	100	90.073	ENSRBIG00000019599	NOB1	100	90.073	Rhinopithecus_bieti
ENSBTAG00000020633	NOB1	100	90.073	ENSRROG00000033419	NOB1	100	90.073	Rhinopithecus_roxellana
ENSBTAG00000020633	NOB1	84	90.517	ENSSBOG00000029042	NOB1	89	89.943	Saimiri_boliviensis_boliviensis
ENSBTAG00000020633	NOB1	100	77.273	ENSSHAG00000015387	NOB1	100	77.990	Sarcophilus_harrisii
ENSBTAG00000020633	NOB1	100	63.678	ENSSFOG00015008503	nob1	100	64.253	Scleropages_formosus
ENSBTAG00000020633	NOB1	100	64.286	ENSSMAG00000003064	nob1	100	65.476	Scophthalmus_maximus
ENSBTAG00000020633	NOB1	100	63.981	ENSSDUG00000007307	nob1	100	63.084	Seriola_dumerili
ENSBTAG00000020633	NOB1	69	72.067	ENSSLDG00000011459	-	96	72.067	Seriola_lalandi_dorsalis
ENSBTAG00000020633	NOB1	94	65.239	ENSSPUG00000005621	NOB1	99	71.591	Sphenodon_punctatus
ENSBTAG00000020633	NOB1	100	64.819	ENSSPAG00000022362	nob1	100	64.133	Stegastes_partitus
ENSBTAG00000020633	NOB1	100	92.010	ENSSSCG00000002753	NOB1	100	92.010	Sus_scrofa
ENSBTAG00000020633	NOB1	50	76.279	ENSTGUG00000008124	NOB1	98	71.730	Taeniopygia_guttata
ENSBTAG00000020633	NOB1	99	62.100	ENSTRUG00000004780	nob1	100	60.586	Takifugu_rubripes
ENSBTAG00000020633	NOB1	99	62.100	ENSTRUG00000023145	nob1	100	60.586	Takifugu_rubripes
ENSBTAG00000020633	NOB1	99	62.740	ENSTNIG00000002552	nob1	100	63.007	Tetraodon_nigroviridis
ENSBTAG00000020633	NOB1	59	87.755	ENSTBEG00000000690	NOB1	52	87.755	Tupaia_belangeri
ENSBTAG00000020633	NOB1	62	90.234	ENSUAMG00000028135	NOB1	100	91.016	Ursus_americanus
ENSBTAG00000020633	NOB1	100	90.821	ENSUMAG00000018658	NOB1	95	91.304	Ursus_maritimus
ENSBTAG00000020633	NOB1	100	90.338	ENSVVUG00000017271	NOB1	100	90.338	Vulpes_vulpes
ENSBTAG00000020633	NOB1	100	62.844	ENSXETG00000017874	nob1	99	62.615	Xenopus_tropicalis
ENSBTAG00000020633	NOB1	84	61.714	ENSXCOG00000009734	nob1	100	61.429	Xiphophorus_couchianus
ENSBTAG00000020633	NOB1	100	62.945	ENSXMAG00000017371	nob1	100	62.708	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000469	cleavage involved in rRNA processing	-	IEA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process