EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000020777 (Gene tree)
Gene ID: 507984
Gene Symbol: ERCC3
Alias: -
Full Name: Bos taurus ERCC excision repair 3%2C TFIIH core complex helicase subunit (ERCC3)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 30319 bases
Position: chr2:5248748-5279066
Accession: NM_001045988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000067881	ResIII	PF04851.15	1.9e-15	1	1
ENSBTAP00000027687	ResIII	PF04851.15	1.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000069750	-	2334	-	ENSBTAP00000067881	777 (aa)	-	-
ENSBTAT00000027687	-	2754	XM_015474411	ENSBTAP00000027687	782 (aa)	XP_015329897	Q1RMT1

Gene Model

Click here to download ENSBTAG00000020777's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03022	Basal transcription factors	KEGG
bta03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000020777's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000020777	ERCC3	100	97.315	ENSG00000163161	ERCC3	99	99.379	Homo_sapiens
ENSBTAG00000020777	ERCC3	100	88.041	ENSAPOG00000014383	ercc3	100	88.041	Acanthochromis_polyacanthus
ENSBTAG00000020777	ERCC3	100	96.547	ENSAMEG00000016840	ERCC3	100	96.547	Ailuropoda_melanoleuca
ENSBTAG00000020777	ERCC3	99	86.744	ENSACIG00000000126	ercc3	100	86.744	Amphilophus_citrinellus
ENSBTAG00000020777	ERCC3	100	87.659	ENSAOCG00000009396	ercc3	100	87.913	Amphiprion_ocellaris
ENSBTAG00000020777	ERCC3	100	87.659	ENSAPEG00000023077	ercc3	100	87.913	Amphiprion_percula
ENSBTAG00000020777	ERCC3	100	87.150	ENSATEG00000014860	ercc3	100	87.659	Anabas_testudineus
ENSBTAG00000020777	ERCC3	90	93.362	ENSAPLG00000012068	ERCC3	98	93.362	Anas_platyrhynchos
ENSBTAG00000020777	ERCC3	92	93.324	ENSACAG00000009919	ERCC3	100	93.324	Anolis_carolinensis
ENSBTAG00000020777	ERCC3	100	97.442	ENSANAG00000031091	ERCC3	100	97.442	Aotus_nancymaae
ENSBTAG00000020777	ERCC3	100	86.896	ENSACLG00000022508	ercc3	100	86.896	Astatotilapia_calliptera
ENSBTAG00000020777	ERCC3	100	86.990	ENSAMXG00000036947	ercc3	100	86.990	Astyanax_mexicanus
ENSBTAG00000020777	ERCC3	99	62.907	WBGene00013441	xpb-1	99	63.171	Caenorhabditis_elegans
ENSBTAG00000020777	ERCC3	100	97.315	ENSCJAG00000010416	ERCC3	100	97.315	Callithrix_jacchus
ENSBTAG00000020777	ERCC3	100	97.315	ENSCAFG00000004497	ERCC3	100	97.315	Canis_familiaris
ENSBTAG00000020777	ERCC3	100	97.315	ENSCAFG00020003495	ERCC3	100	97.315	Canis_lupus_dingo
ENSBTAG00000020777	ERCC3	100	99.361	ENSCHIG00000014551	ERCC3	100	99.361	Capra_hircus
ENSBTAG00000020777	ERCC3	99	95.882	ENSTSYG00000004137	ERCC3	99	95.882	Carlito_syrichta
ENSBTAG00000020777	ERCC3	89	81.818	ENSCAPG00000017027	ERCC3	100	81.818	Cavia_aperea
ENSBTAG00000020777	ERCC3	100	96.036	ENSCPOG00000002144	ERCC3	100	96.036	Cavia_porcellus
ENSBTAG00000020777	ERCC3	100	97.442	ENSCCAG00000024421	ERCC3	100	97.442	Cebus_capucinus
ENSBTAG00000020777	ERCC3	100	97.570	ENSCATG00000032313	ERCC3	100	97.570	Cercocebus_atys
ENSBTAG00000020777	ERCC3	100	96.803	ENSCLAG00000002965	ERCC3	96	96.803	Chinchilla_lanigera
ENSBTAG00000020777	ERCC3	100	97.442	ENSCSAG00000016827	ERCC3	100	97.442	Chlorocebus_sabaeus
ENSBTAG00000020777	ERCC3	83	97.661	ENSCHOG00000007414	ERCC3	83	97.661	Choloepus_hoffmanni
ENSBTAG00000020777	ERCC3	92	93.324	ENSCPBG00000013638	ERCC3	100	93.324	Chrysemys_picta_bellii
ENSBTAG00000020777	ERCC3	95	72.464	ENSCING00000002867	ercc3	95	72.464	Ciona_intestinalis
ENSBTAG00000020777	ERCC3	100	97.315	ENSCANG00000007094	ERCC3	100	97.315	Colobus_angolensis_palliatus
ENSBTAG00000020777	ERCC3	100	95.908	ENSCGRG00001009426	Ercc3	100	95.908	Cricetulus_griseus_chok1gshd
ENSBTAG00000020777	ERCC3	97	95.000	ENSCGRG00000015547	Ercc3	100	95.000	Cricetulus_griseus_crigri
ENSBTAG00000020777	ERCC3	100	86.023	ENSCSEG00000016479	ercc3	100	86.150	Cynoglossus_semilaevis
ENSBTAG00000020777	ERCC3	100	87.277	ENSCVAG00000015177	ercc3	100	87.532	Cyprinodon_variegatus
ENSBTAG00000020777	ERCC3	96	89.007	ENSDARG00000002402	ercc3	100	87.771	Danio_rerio
ENSBTAG00000020777	ERCC3	57	97.506	ENSDNOG00000035027	ERCC3	95	97.506	Dasypus_novemcinctus
ENSBTAG00000020777	ERCC3	100	96.675	ENSDORG00000004671	Ercc3	100	96.675	Dipodomys_ordii
ENSBTAG00000020777	ERCC3	99	68.500	FBgn0001179	hay	94	70.658	Drosophila_melanogaster
ENSBTAG00000020777	ERCC3	90	97.764	ENSETEG00000019887	ERCC3	90	97.764	Echinops_telfairi
ENSBTAG00000020777	ERCC3	100	79.014	ENSEBUG00000009773	ercc3	100	79.014	Eptatretus_burgeri
ENSBTAG00000020777	ERCC3	100	95.636	ENSEASG00005022466	ERCC3	100	95.636	Equus_asinus_asinus
ENSBTAG00000020777	ERCC3	100	98.082	ENSECAG00000006589	ERCC3	100	98.082	Equus_caballus
ENSBTAG00000020777	ERCC3	93	95.225	ENSEEUG00000001057	ERCC3	100	95.225	Erinaceus_europaeus
ENSBTAG00000020777	ERCC3	100	85.769	ENSELUG00000000089	ercc3	99	85.769	Esox_lucius
ENSBTAG00000020777	ERCC3	100	97.570	ENSFCAG00000006989	ERCC3	100	97.570	Felis_catus
ENSBTAG00000020777	ERCC3	99	92.149	ENSFALG00000003936	ERCC3	99	92.149	Ficedula_albicollis
ENSBTAG00000020777	ERCC3	100	95.652	ENSFDAG00000011924	ERCC3	100	95.652	Fukomys_damarensis
ENSBTAG00000020777	ERCC3	100	87.277	ENSFHEG00000005185	ercc3	100	87.277	Fundulus_heteroclitus
ENSBTAG00000020777	ERCC3	100	84.311	ENSGMOG00000018032	ercc3	99	84.311	Gadus_morhua
ENSBTAG00000020777	ERCC3	98	92.559	ENSGALG00000011515	ERCC3	99	92.288	Gallus_gallus
ENSBTAG00000020777	ERCC3	100	87.532	ENSGAFG00000011936	ercc3	100	87.532	Gambusia_affinis
ENSBTAG00000020777	ERCC3	100	85.878	ENSGACG00000015218	ercc3	100	85.878	Gasterosteus_aculeatus
ENSBTAG00000020777	ERCC3	92	93.463	ENSGAGG00000018579	ERCC3	100	93.463	Gopherus_agassizii
ENSBTAG00000020777	ERCC3	100	97.442	ENSGGOG00000015255	ERCC3	100	97.442	Gorilla_gorilla
ENSBTAG00000020777	ERCC3	100	86.896	ENSHBUG00000003818	ercc3	100	86.896	Haplochromis_burtoni
ENSBTAG00000020777	ERCC3	100	96.675	ENSHGLG00000011014	ERCC3	100	96.675	Heterocephalus_glaber_female
ENSBTAG00000020777	ERCC3	100	96.675	ENSHGLG00100013806	ERCC3	100	96.675	Heterocephalus_glaber_male
ENSBTAG00000020777	ERCC3	100	86.624	ENSHCOG00000016924	ercc3	100	86.752	Hippocampus_comes
ENSBTAG00000020777	ERCC3	100	87.134	ENSIPUG00000021000	ercc3	100	87.134	Ictalurus_punctatus
ENSBTAG00000020777	ERCC3	100	97.442	ENSSTOG00000011001	ERCC3	100	97.442	Ictidomys_tridecemlineatus
ENSBTAG00000020777	ERCC3	90	95.319	ENSJJAG00000001117	Ercc3	100	95.319	Jaculus_jaculus
ENSBTAG00000020777	ERCC3	100	87.786	ENSKMAG00000021764	ercc3	100	87.786	Kryptolebias_marmoratus
ENSBTAG00000020777	ERCC3	100	86.369	ENSLBEG00000000468	ercc3	100	86.369	Labrus_bergylta
ENSBTAG00000020777	ERCC3	100	85.660	ENSLACG00000014815	ERCC3	100	85.660	Latimeria_chalumnae
ENSBTAG00000020777	ERCC3	94	81.016	ENSLOCG00000010907	ercc3	92	81.016	Lepisosteus_oculatus
ENSBTAG00000020777	ERCC3	100	97.315	ENSLAFG00000014866	ERCC3	100	97.315	Loxodonta_africana
ENSBTAG00000020777	ERCC3	100	97.570	ENSMFAG00000003370	ERCC3	100	97.570	Macaca_fascicularis
ENSBTAG00000020777	ERCC3	100	93.561	ENSMNEG00000004215	ERCC3	100	93.561	Macaca_nemestrina
ENSBTAG00000020777	ERCC3	100	97.570	ENSMLEG00000042061	ERCC3	100	97.570	Mandrillus_leucophaeus
ENSBTAG00000020777	ERCC3	100	87.405	ENSMAMG00000004505	ercc3	99	87.405	Mastacembelus_armatus
ENSBTAG00000020777	ERCC3	100	86.896	ENSMZEG00005004854	ercc3	100	86.896	Maylandia_zebra
ENSBTAG00000020777	ERCC3	90	93.475	ENSMGAG00000011706	ERCC3	100	93.475	Meleagris_gallopavo
ENSBTAG00000020777	ERCC3	100	95.658	ENSMAUG00000004515	Ercc3	100	95.658	Mesocricetus_auratus
ENSBTAG00000020777	ERCC3	100	97.187	ENSMICG00000009578	ERCC3	100	97.187	Microcebus_murinus
ENSBTAG00000020777	ERCC3	100	95.908	ENSMOCG00000021767	Ercc3	100	95.908	Microtus_ochrogaster
ENSBTAG00000020777	ERCC3	99	86.287	ENSMMOG00000018174	ercc3	99	86.287	Mola_mola
ENSBTAG00000020777	ERCC3	98	94.778	ENSMODG00000018695	ERCC3	100	94.381	Monodelphis_domestica
ENSBTAG00000020777	ERCC3	100	87.023	ENSMALG00000014944	ercc3	100	87.277	Monopterus_albus
ENSBTAG00000020777	ERCC3	100	95.524	MGP_CAROLIEiJ_G0022075	Ercc3	100	95.524	Mus_caroli
ENSBTAG00000020777	ERCC3	100	94.891	ENSMUSG00000024382	Ercc3	100	94.891	Mus_musculus
ENSBTAG00000020777	ERCC3	100	95.908	MGP_PahariEiJ_G0018809	Ercc3	100	95.908	Mus_pahari
ENSBTAG00000020777	ERCC3	100	95.147	MGP_SPRETEiJ_G0022987	Ercc3	100	95.147	Mus_spretus
ENSBTAG00000020777	ERCC3	100	97.442	ENSMPUG00000012021	ERCC3	100	97.442	Mustela_putorius_furo
ENSBTAG00000020777	ERCC3	92	92.149	ENSMLUG00000007429	ERCC3	99	92.149	Myotis_lucifugus
ENSBTAG00000020777	ERCC3	99	93.103	ENSNGAG00000019598	Ercc3	100	97.023	Nannospalax_galili
ENSBTAG00000020777	ERCC3	100	86.896	ENSNBRG00000019074	ercc3	100	86.896	Neolamprologus_brichardi
ENSBTAG00000020777	ERCC3	92	95.112	ENSNLEG00000015665	ERCC3	97	95.112	Nomascus_leucogenys
ENSBTAG00000020777	ERCC3	100	93.862	ENSOPRG00000004553	ERCC3	100	93.862	Ochotona_princeps
ENSBTAG00000020777	ERCC3	100	97.315	ENSODEG00000005795	ERCC3	100	97.315	Octodon_degus
ENSBTAG00000020777	ERCC3	100	86.896	ENSONIG00000003255	ercc3	100	86.896	Oreochromis_niloticus
ENSBTAG00000020777	ERCC3	100	97.570	ENSOCUG00000002248	ERCC3	100	97.570	Oryctolagus_cuniculus
ENSBTAG00000020777	ERCC3	100	86.896	ENSORLG00000004393	ercc3	100	86.896	Oryzias_latipes
ENSBTAG00000020777	ERCC3	100	86.896	ENSORLG00020017718	ercc3	100	86.896	Oryzias_latipes_hni
ENSBTAG00000020777	ERCC3	100	86.896	ENSORLG00015015695	ercc3	100	86.896	Oryzias_latipes_hsok
ENSBTAG00000020777	ERCC3	100	87.405	ENSOMEG00000015374	ercc3	100	87.405	Oryzias_melastigma
ENSBTAG00000020777	ERCC3	100	97.066	ENSOGAG00000009103	ERCC3	100	97.066	Otolemur_garnettii
ENSBTAG00000020777	ERCC3	100	99.233	ENSOARG00000016147	ERCC3	100	99.233	Ovis_aries
ENSBTAG00000020777	ERCC3	100	97.442	ENSPPAG00000036166	ERCC3	100	97.442	Pan_paniscus
ENSBTAG00000020777	ERCC3	100	97.698	ENSPPRG00000001305	ERCC3	100	97.698	Panthera_pardus
ENSBTAG00000020777	ERCC3	92	98.468	ENSPTIG00000016969	ERCC3	100	98.468	Panthera_tigris_altaica
ENSBTAG00000020777	ERCC3	100	97.442	ENSPTRG00000046940	ERCC3	100	97.442	Pan_troglodytes
ENSBTAG00000020777	ERCC3	100	97.570	ENSPANG00000007699	ERCC3	100	97.570	Papio_anubis
ENSBTAG00000020777	ERCC3	100	87.421	ENSPKIG00000001319	ercc3	100	87.421	Paramormyrops_kingsleyae
ENSBTAG00000020777	ERCC3	92	93.324	ENSPSIG00000014682	ERCC3	100	93.324	Pelodiscus_sinensis
ENSBTAG00000020777	ERCC3	96	89.523	ENSPMGG00000017885	ercc3	99	88.265	Periophthalmus_magnuspinnatus
ENSBTAG00000020777	ERCC3	100	96.036	ENSPEMG00000013733	Ercc3	100	96.036	Peromyscus_maniculatus_bairdii
ENSBTAG00000020777	ERCC3	90	78.322	ENSPMAG00000005081	ercc3	99	78.322	Petromyzon_marinus
ENSBTAG00000020777	ERCC3	99	94.961	ENSPCIG00000011821	ERCC3	100	94.636	Phascolarctos_cinereus
ENSBTAG00000020777	ERCC3	96	88.757	ENSPFOG00000015604	ercc3	100	87.532	Poecilia_formosa
ENSBTAG00000020777	ERCC3	96	86.551	ENSPLAG00000022245	ercc3	100	88.781	Poecilia_latipinna
ENSBTAG00000020777	ERCC3	96	88.757	ENSPMEG00000016987	ercc3	100	87.532	Poecilia_mexicana
ENSBTAG00000020777	ERCC3	100	87.913	ENSPREG00000020921	ercc3	100	87.913	Poecilia_reticulata
ENSBTAG00000020777	ERCC3	100	96.679	ENSPPYG00000012769	ERCC3	100	96.679	Pongo_abelii
ENSBTAG00000020777	ERCC3	100	97.570	ENSPCOG00000024903	ERCC3	100	97.570	Propithecus_coquereli
ENSBTAG00000020777	ERCC3	90	95.703	ENSPVAG00000013774	ERCC3	90	95.703	Pteropus_vampyrus
ENSBTAG00000020777	ERCC3	100	86.896	ENSPNYG00000001208	ercc3	100	86.896	Pundamilia_nyererei
ENSBTAG00000020777	ERCC3	100	88.408	ENSPNAG00000005748	ercc3	100	88.408	Pygocentrus_nattereri
ENSBTAG00000020777	ERCC3	100	95.780	ENSRNOG00000013180	Ercc3	100	95.780	Rattus_norvegicus
ENSBTAG00000020777	ERCC3	100	97.315	ENSRBIG00000027692	ERCC3	100	97.315	Rhinopithecus_bieti
ENSBTAG00000020777	ERCC3	100	97.442	ENSRROG00000040673	ERCC3	100	97.442	Rhinopithecus_roxellana
ENSBTAG00000020777	ERCC3	99	53.275	YIL143C	SSL2	85	55.738	Saccharomyces_cerevisiae
ENSBTAG00000020777	ERCC3	100	97.187	ENSSBOG00000023079	ERCC3	100	97.187	Saimiri_boliviensis_boliviensis
ENSBTAG00000020777	ERCC3	98	94.648	ENSSHAG00000007423	ERCC3	100	94.253	Sarcophilus_harrisii
ENSBTAG00000020777	ERCC3	96	88.477	ENSSFOG00015012753	ercc3	100	87.261	Scleropages_formosus
ENSBTAG00000020777	ERCC3	100	86.260	ENSSMAG00000011915	ercc3	100	86.260	Scophthalmus_maximus
ENSBTAG00000020777	ERCC3	100	86.785	ENSSDUG00000021181	ercc3	100	86.785	Seriola_dumerili
ENSBTAG00000020777	ERCC3	100	86.785	ENSSLDG00000008744	ercc3	98	86.785	Seriola_lalandi_dorsalis
ENSBTAG00000020777	ERCC3	65	76.712	ENSSARG00000000751	-	100	76.712	Sorex_araneus
ENSBTAG00000020777	ERCC3	90	92.624	ENSSPUG00000015183	ERCC3	91	92.624	Sphenodon_punctatus
ENSBTAG00000020777	ERCC3	100	87.659	ENSSPAG00000004748	ercc3	100	87.659	Stegastes_partitus
ENSBTAG00000020777	ERCC3	100	98.082	ENSSSCG00000015721	ERCC3	100	98.720	Sus_scrofa
ENSBTAG00000020777	ERCC3	99	92.765	ENSTGUG00000004920	-	100	93.411	Taeniopygia_guttata
ENSBTAG00000020777	ERCC3	100	86.497	ENSTRUG00000017185	ercc3	100	86.497	Takifugu_rubripes
ENSBTAG00000020777	ERCC3	97	84.273	ENSTNIG00000005457	ercc3	99	85.828	Tetraodon_nigroviridis
ENSBTAG00000020777	ERCC3	80	97.120	ENSTBEG00000009381	ERCC3	81	97.120	Tupaia_belangeri
ENSBTAG00000020777	ERCC3	68	98.674	ENSUAMG00000009589	-	100	98.674	Ursus_americanus
ENSBTAG00000020777	ERCC3	100	97.442	ENSUMAG00000008361	ERCC3	100	97.442	Ursus_maritimus
ENSBTAG00000020777	ERCC3	92	98.329	ENSVVUG00000010431	ERCC3	100	98.329	Vulpes_vulpes
ENSBTAG00000020777	ERCC3	100	90.076	ENSXETG00000033646	ercc3	100	90.076	Xenopus_tropicalis
ENSBTAG00000020777	ERCC3	99	87.500	ENSXCOG00000001791	ercc3	99	87.500	Xiphophorus_couchianus
ENSBTAG00000020777	ERCC3	100	87.659	ENSXMAG00000003641	ercc3	100	87.659	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000717	nucleotide-excision repair, DNA duplex unwinding	-	ISS	Process
GO:0003677	DNA binding	-	IEA	Function
GO:0004672	protein kinase activity	-	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005669	transcription factor TFIID complex	-	IEA	Component
GO:0005675	transcription factor TFIIH holo complex	-	ISS	Component
GO:0006265	DNA topological change	-	ISS	Process
GO:0006281	DNA repair	-	ISS	Process
GO:0006283	transcription-coupled nucleotide-excision repair	-	ISS	Process
GO:0006289	nucleotide-excision repair	-	ISS	Process
GO:0006366	transcription by RNA polymerase II	-	ISS	Process
GO:0006468	protein phosphorylation	-	IEA	Process
GO:0006915	apoptotic process	-	ISS	Process
GO:0006979	response to oxidative stress	-	ISS	Process
GO:0008022	protein C-terminus binding	-	ISS	Function
GO:0008094	DNA-dependent ATPase activity	-	ISS	Function
GO:0008104	protein localization	-	ISS	Process
GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	-	ISS	Function
GO:0009411	response to UV	-	ISS	Process
GO:0009650	UV protection	-	IEA	Process
GO:0016887	ATPase activity	-	ISS	Function
GO:0033683	nucleotide-excision repair, DNA incision	-	ISS	Process
GO:0035315	hair cell differentiation	-	ISS	Process
GO:0043065	positive regulation of apoptotic process	-	IEA	Process
GO:0043138	3'-5' DNA helicase activity	-	ISS	Function
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISS	Process
GO:0047485	protein N-terminus binding	-	ISS	Function
GO:1901990	regulation of mitotic cell cycle phase transition	-	ISS	Process