EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSBTAG00000020780 (Gene tree)
Gene ID: 512682
Gene Symbol: SBNO2
Alias: -
Full Name: Bos taurus strawberry notch homolog 2 (SBNO2)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 43279 bases
Position: chr7:43592131-43635409
Accession: NM_001077911
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000070644	ResIII	PF04851.15	8e-06	1	1
ENSBTAP00000071527	ResIII	PF04851.15	8.2e-06	1	1
ENSBTAP00000027693	ResIII	PF04851.15	8.7e-06	1	1
ENSBTAP00000073705	ResIII	PF04851.15	8.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000027693	-	4954	XM_010807237	ENSBTAP00000027693	1374 (aa)	XP_010805539	A0JND4
ENSBTAT00000074450	-	5011	XM_005209285	ENSBTAP00000071527	1322 (aa)	XP_005209342	UPI000383F0E4
ENSBTAT00000085675	-	4882	-	ENSBTAP00000070644	1303 (aa)	XP_005209343	UPI000383FE11
ENSBTAT00000074771	-	6008	-	ENSBTAP00000073705	1374 (aa)	XP_024849913	UPI0000E67455

Gene Model

Click here to download ENSBTAG00000020780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000020780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000020780	SBNO2	72	67.574	ENSBTAG00000020505	SBNO1	71	67.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000020780	SBNO2	100	86.084	ENSG00000064932	SBNO2	98	86.708	Homo_sapiens
ENSBTAG00000020780	SBNO2	87	70.200	ENSAPOG00000003185	si:ch73-63e15.2	88	68.534	Acanthochromis_polyacanthus
ENSBTAG00000020780	SBNO2	88	69.658	ENSAOCG00000016581	si:ch73-63e15.2	93	71.058	Amphiprion_ocellaris
ENSBTAG00000020780	SBNO2	88	69.573	ENSAPEG00000008862	si:ch73-63e15.2	76	69.871	Amphiprion_percula
ENSBTAG00000020780	SBNO2	88	69.411	ENSATEG00000023838	si:ch73-63e15.2	93	70.860	Anabas_testudineus
ENSBTAG00000020780	SBNO2	98	71.822	ENSAPLG00000007158	SBNO2	100	71.418	Anas_platyrhynchos
ENSBTAG00000020780	SBNO2	100	84.335	ENSANAG00000026685	SBNO2	98	84.621	Aotus_nancymaae
ENSBTAG00000020780	SBNO2	89	68.305	ENSACLG00000005090	si:ch73-63e15.2	78	65.504	Astatotilapia_calliptera
ENSBTAG00000020780	SBNO2	88	69.211	ENSAMXG00000015881	si:ch73-63e15.2	83	69.019	Astyanax_mexicanus
ENSBTAG00000020780	SBNO2	91	65.818	ENSAMXG00000018868	sbno2a	98	69.369	Astyanax_mexicanus
ENSBTAG00000020780	SBNO2	100	89.600	ENSCAFG00000019543	SBNO2	100	89.600	Canis_familiaris
ENSBTAG00000020780	SBNO2	92	92.054	ENSCAFG00020017115	SBNO2	99	91.835	Canis_lupus_dingo
ENSBTAG00000020780	SBNO2	100	98.693	ENSCHIG00000026127	SBNO2	100	98.693	Capra_hircus
ENSBTAG00000020780	SBNO2	87	86.116	ENSCAPG00000005731	SBNO2	99	84.102	Cavia_aperea
ENSBTAG00000020780	SBNO2	98	82.541	ENSCPOG00000007477	SBNO2	99	80.427	Cavia_porcellus
ENSBTAG00000020780	SBNO2	100	84.323	ENSCCAG00000037518	SBNO2	98	84.699	Cebus_capucinus
ENSBTAG00000020780	SBNO2	100	86.388	ENSCATG00000037046	SBNO2	98	87.172	Cercocebus_atys
ENSBTAG00000020780	SBNO2	88	88.985	ENSCLAG00000010178	SBNO2	99	89.159	Chinchilla_lanigera
ENSBTAG00000020780	SBNO2	100	85.445	ENSCSAG00000012317	SBNO2	99	85.486	Chlorocebus_sabaeus
ENSBTAG00000020780	SBNO2	98	71.172	ENSCPBG00000008920	SBNO2	92	77.332	Chrysemys_picta_bellii
ENSBTAG00000020780	SBNO2	85	88.475	ENSCANG00000036745	SBNO2	96	89.209	Colobus_angolensis_palliatus
ENSBTAG00000020780	SBNO2	98	83.216	ENSCGRG00001023960	Sbno2	100	80.145	Cricetulus_griseus_chok1gshd
ENSBTAG00000020780	SBNO2	98	85.110	ENSCGRG00000011984	Sbno2	100	81.904	Cricetulus_griseus_crigri
ENSBTAG00000020780	SBNO2	87	66.988	ENSCSEG00000006856	si:ch73-63e15.2	96	67.482	Cynoglossus_semilaevis
ENSBTAG00000020780	SBNO2	88	68.686	ENSCVAG00000005663	si:ch73-63e15.2	77	68.809	Cyprinodon_variegatus
ENSBTAG00000020780	SBNO2	90	64.151	ENSDARG00000098801	sbno2a	96	60.886	Danio_rerio
ENSBTAG00000020780	SBNO2	88	67.639	ENSDARG00000016188	SBNO2	82	67.639	Danio_rerio
ENSBTAG00000020780	SBNO2	100	85.642	ENSDORG00000002916	Sbno2	100	85.113	Dipodomys_ordii
ENSBTAG00000020780	SBNO2	100	89.195	ENSEASG00005021621	SBNO2	100	88.800	Equus_asinus_asinus
ENSBTAG00000020780	SBNO2	100	89.195	ENSECAG00000011827	SBNO2	100	88.800	Equus_caballus
ENSBTAG00000020780	SBNO2	88	69.456	ENSELUG00000020457	si:ch73-63e15.2	79	69.086	Esox_lucius
ENSBTAG00000020780	SBNO2	90	76.020	ENSFALG00000013988	SBNO2	95	72.485	Ficedula_albicollis
ENSBTAG00000020780	SBNO2	98	80.503	ENSFDAG00000015186	SBNO2	100	78.400	Fukomys_damarensis
ENSBTAG00000020780	SBNO2	88	68.291	ENSFHEG00000022262	si:ch73-63e15.2	76	68.412	Fundulus_heteroclitus
ENSBTAG00000020780	SBNO2	91	67.615	ENSGMOG00000007542	si:ch73-63e15.2	96	68.862	Gadus_morhua
ENSBTAG00000020780	SBNO2	99	69.773	ENSGALG00000037522	SBNO2	99	67.684	Gallus_gallus
ENSBTAG00000020780	SBNO2	88	69.218	ENSGAFG00000004860	si:ch73-63e15.2	91	69.092	Gambusia_affinis
ENSBTAG00000020780	SBNO2	87	69.948	ENSGACG00000013190	si:ch73-63e15.2	94	70.122	Gasterosteus_aculeatus
ENSBTAG00000020780	SBNO2	99	70.935	ENSGAGG00000008348	SBNO2	99	70.861	Gopherus_agassizii
ENSBTAG00000020780	SBNO2	89	68.336	ENSHBUG00000010742	si:ch73-63e15.2	77	68.777	Haplochromis_burtoni
ENSBTAG00000020780	SBNO2	100	84.203	ENSHGLG00000008739	SBNO2	100	84.359	Heterocephalus_glaber_female
ENSBTAG00000020780	SBNO2	93	84.578	ENSHGLG00100005269	SBNO2	99	89.592	Heterocephalus_glaber_male
ENSBTAG00000020780	SBNO2	87	68.476	ENSHCOG00000000884	si:ch73-63e15.2	85	69.372	Hippocampus_comes
ENSBTAG00000020780	SBNO2	87	69.546	ENSIPUG00000000537	si:ch73-63e15.2	83	69.634	Ictalurus_punctatus
ENSBTAG00000020780	SBNO2	87	68.278	ENSIPUG00000019672	sbno2	93	70.539	Ictalurus_punctatus
ENSBTAG00000020780	SBNO2	100	85.932	ENSSTOG00000025832	SBNO2	100	84.704	Ictidomys_tridecemlineatus
ENSBTAG00000020780	SBNO2	99	81.231	ENSJJAG00000017397	Sbno2	99	80.317	Jaculus_jaculus
ENSBTAG00000020780	SBNO2	88	69.444	ENSKMAG00000005541	si:ch73-63e15.2	77	69.290	Kryptolebias_marmoratus
ENSBTAG00000020780	SBNO2	88	68.166	ENSLBEG00000025016	si:ch73-63e15.2	95	70.052	Labrus_bergylta
ENSBTAG00000020780	SBNO2	50	72.247	ENSLACG00000012598	SBNO2	100	73.970	Latimeria_chalumnae
ENSBTAG00000020780	SBNO2	97	65.328	ENSLOCG00000004643	si:ch73-63e15.2	84	70.747	Lepisosteus_oculatus
ENSBTAG00000020780	SBNO2	97	82.418	ENSLAFG00000008824	SBNO2	100	82.025	Loxodonta_africana
ENSBTAG00000020780	SBNO2	100	83.562	ENSMFAG00000040030	SBNO2	98	84.300	Macaca_fascicularis
ENSBTAG00000020780	SBNO2	100	85.518	ENSMMUG00000010886	SBNO2	99	85.559	Macaca_mulatta
ENSBTAG00000020780	SBNO2	100	86.464	ENSMNEG00000039927	SBNO2	98	87.172	Macaca_nemestrina
ENSBTAG00000020780	SBNO2	84	87.771	ENSMLEG00000038556	SBNO2	98	87.771	Mandrillus_leucophaeus
ENSBTAG00000020780	SBNO2	88	69.119	ENSMAMG00000018758	si:ch73-63e15.2	75	69.416	Mastacembelus_armatus
ENSBTAG00000020780	SBNO2	89	68.251	ENSMZEG00005010682	si:ch73-63e15.2	78	65.449	Maylandia_zebra
ENSBTAG00000020780	SBNO2	99	72.401	ENSMGAG00000003801	SBNO2	99	71.875	Meleagris_gallopavo
ENSBTAG00000020780	SBNO2	98	85.255	ENSMAUG00000008034	Sbno2	100	81.745	Mesocricetus_auratus
ENSBTAG00000020780	SBNO2	100	87.367	ENSMICG00000013071	SBNO2	99	87.452	Microcebus_murinus
ENSBTAG00000020780	SBNO2	100	81.917	ENSMOCG00000010504	Sbno2	100	82.267	Microtus_ochrogaster
ENSBTAG00000020780	SBNO2	98	75.208	ENSMODG00000005382	SBNO2	100	72.740	Monodelphis_domestica
ENSBTAG00000020780	SBNO2	73	65.236	ENSMALG00000021831	si:ch73-63e15.2	98	64.609	Monopterus_albus
ENSBTAG00000020780	SBNO2	100	82.656	ENSMUSG00000035673	Sbno2	100	84.831	Mus_musculus
ENSBTAG00000020780	SBNO2	98	85.188	MGP_PahariEiJ_G0030976	Sbno2	100	81.745	Mus_pahari
ENSBTAG00000020780	SBNO2	100	82.789	MGP_SPRETEiJ_G0016381	Sbno2	99	84.548	Mus_spretus
ENSBTAG00000020780	SBNO2	79	91.405	ENSMPUG00000008747	SBNO2	100	91.405	Mustela_putorius_furo
ENSBTAG00000020780	SBNO2	98	82.732	ENSNGAG00000004308	Sbno2	100	80.582	Nannospalax_galili
ENSBTAG00000020780	SBNO2	84	68.677	ENSNBRG00000022968	si:ch73-63e15.2	93	72.919	Neolamprologus_brichardi
ENSBTAG00000020780	SBNO2	94	84.670	ENSNLEG00000001305	SBNO2	99	83.871	Nomascus_leucogenys
ENSBTAG00000020780	SBNO2	76	75.238	ENSMEUG00000013511	-	81	74.815	Notamacropus_eugenii
ENSBTAG00000020780	SBNO2	94	85.191	ENSOPRG00000017238	SBNO2	100	85.110	Ochotona_princeps
ENSBTAG00000020780	SBNO2	98	84.169	ENSODEG00000011822	SBNO2	99	82.985	Octodon_degus
ENSBTAG00000020780	SBNO2	92	65.595	ENSONIG00000002490	si:ch73-63e15.2	97	65.944	Oreochromis_niloticus
ENSBTAG00000020780	SBNO2	88	67.637	ENSORLG00000000913	si:ch73-63e15.2	78	67.146	Oryzias_latipes
ENSBTAG00000020780	SBNO2	88	67.637	ENSORLG00020010978	si:ch73-63e15.2	78	67.146	Oryzias_latipes_hni
ENSBTAG00000020780	SBNO2	88	67.723	ENSORLG00015000202	si:ch73-63e15.2	78	67.231	Oryzias_latipes_hsok
ENSBTAG00000020780	SBNO2	89	67.064	ENSOMEG00000000359	si:ch73-63e15.2	79	64.511	Oryzias_melastigma
ENSBTAG00000020780	SBNO2	100	91.140	ENSOARG00000011130	SBNO2	100	91.140	Ovis_aries
ENSBTAG00000020780	SBNO2	100	83.964	ENSPPAG00000032482	SBNO2	98	84.739	Pan_paniscus
ENSBTAG00000020780	SBNO2	100	86.084	ENSPTRG00000010185	SBNO2	99	86.280	Pan_troglodytes
ENSBTAG00000020780	SBNO2	100	83.194	ENSPANG00000009658	SBNO2	98	83.849	Papio_anubis
ENSBTAG00000020780	SBNO2	81	69.165	ENSPKIG00000009707	-	86	69.953	Paramormyrops_kingsleyae
ENSBTAG00000020780	SBNO2	88	67.530	ENSPKIG00000024201	si:ch73-63e15.2	83	68.272	Paramormyrops_kingsleyae
ENSBTAG00000020780	SBNO2	75	79.878	ENSPSIG00000002852	SBNO2	100	79.980	Pelodiscus_sinensis
ENSBTAG00000020780	SBNO2	87	67.622	ENSPMGG00000014375	si:ch73-63e15.2	87	68.246	Periophthalmus_magnuspinnatus
ENSBTAG00000020780	SBNO2	98	82.053	ENSPEMG00000024122	Sbno2	100	79.070	Peromyscus_maniculatus_bairdii
ENSBTAG00000020780	SBNO2	98	75.686	ENSPCIG00000011264	SBNO2	100	73.558	Phascolarctos_cinereus
ENSBTAG00000020780	SBNO2	88	69.637	ENSPFOG00000004096	si:ch73-63e15.2	99	69.278	Poecilia_formosa
ENSBTAG00000020780	SBNO2	88	69.723	ENSPLAG00000014653	si:ch73-63e15.2	77	69.139	Poecilia_latipinna
ENSBTAG00000020780	SBNO2	88	69.607	ENSPMEG00000002129	si:ch73-63e15.2	92	70.279	Poecilia_mexicana
ENSBTAG00000020780	SBNO2	88	69.810	ENSPREG00000006755	si:ch73-63e15.2	78	66.375	Poecilia_reticulata
ENSBTAG00000020780	SBNO2	94	83.116	ENSPCAG00000012256	SBNO2	99	77.269	Procavia_capensis
ENSBTAG00000020780	SBNO2	100	79.680	ENSPCOG00000015216	SBNO2	99	80.201	Propithecus_coquereli
ENSBTAG00000020780	SBNO2	89	68.537	ENSPNYG00000019926	si:ch73-63e15.2	77	68.691	Pundamilia_nyererei
ENSBTAG00000020780	SBNO2	88	69.151	ENSPNAG00000020260	si:ch73-63e15.2	83	69.013	Pygocentrus_nattereri
ENSBTAG00000020780	SBNO2	91	65.375	ENSPNAG00000026609	sbno2a	82	70.141	Pygocentrus_nattereri
ENSBTAG00000020780	SBNO2	98	85.066	ENSRNOG00000013987	Sbno2	99	84.429	Rattus_norvegicus
ENSBTAG00000020780	SBNO2	91	80.605	ENSRBIG00000009740	SBNO2	93	81.330	Rhinopithecus_bieti
ENSBTAG00000020780	SBNO2	89	89.231	ENSRROG00000044671	SBNO2	97	90.447	Rhinopithecus_roxellana
ENSBTAG00000020780	SBNO2	100	83.523	ENSSBOG00000023562	SBNO2	98	84.621	Saimiri_boliviensis_boliviensis
ENSBTAG00000020780	SBNO2	88	79.430	ENSSHAG00000010241	SBNO2	98	79.756	Sarcophilus_harrisii
ENSBTAG00000020780	SBNO2	88	66.752	ENSSFOG00015005861	si:ch73-63e15.2	93	67.179	Scleropages_formosus
ENSBTAG00000020780	SBNO2	88	68.520	ENSSMAG00000012489	si:ch73-63e15.2	74	68.900	Scophthalmus_maximus
ENSBTAG00000020780	SBNO2	88	69.349	ENSSDUG00000003527	si:ch73-63e15.2	74	69.647	Seriola_dumerili
ENSBTAG00000020780	SBNO2	88	69.435	ENSSLDG00000004623	si:ch73-63e15.2	74	69.733	Seriola_lalandi_dorsalis
ENSBTAG00000020780	SBNO2	88	70.060	ENSSPAG00000017717	si:ch73-63e15.2	76	70.060	Stegastes_partitus
ENSBTAG00000020780	SBNO2	98	93.012	ENSSSCG00000030042	SBNO2	97	93.840	Sus_scrofa
ENSBTAG00000020780	SBNO2	86	69.027	ENSTRUG00000018193	si:ch73-63e15.2	88	68.531	Takifugu_rubripes
ENSBTAG00000020780	SBNO2	88	92.738	ENSUAMG00000006568	SBNO2	100	91.416	Ursus_americanus
ENSBTAG00000020780	SBNO2	100	85.999	ENSVVUG00000022823	SBNO2	100	87.231	Vulpes_vulpes
ENSBTAG00000020780	SBNO2	79	78.812	ENSXETG00000021579	sbno2	91	77.426	Xenopus_tropicalis
ENSBTAG00000020780	SBNO2	74	70.010	ENSXCOG00000009209	si:ch73-63e15.2	91	70.308	Xiphophorus_couchianus
ENSBTAG00000020780	SBNO2	88	69.520	ENSXMAG00000012091	si:ch73-63e15.2	87	69.003	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001503	ossification	-	IEA	Process
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process