EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSBTAG00000020782 (Gene tree)
Gene ID: 533968
Gene Symbol: CNOT1
Alias: -
Full Name: Bos taurus CCR4-NOT transcription complex subunit 1 (CNOT1)%2C mRNA.
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Minus strand
Length: 83372 bases
Position: chr18:26304976-26388347
Accession: NM_001206039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000064516	Not1	PF04054.15	1.2e-152	1	1
ENSBTAP00000027695	Not1	PF04054.15	1.3e-152	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000027695	-	8091	XM_005218664	ENSBTAP00000027695	2376 (aa)	XP_005218721	F1MHU9
ENSBTAT00000067460	-	7689	-	ENSBTAP00000064516	2242 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000020782's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000020782's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000020782	CNOT1	100	99.747	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSBTAG00000020782	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSBTAG00000020782	CNOT1	100	99.579	ENSAMEG00000017298	CNOT1	100	99.579	Ailuropoda_melanoleuca
ENSBTAG00000020782	CNOT1	89	97.521	ENSACIG00000016003	cnot1	94	97.521	Amphilophus_citrinellus
ENSBTAG00000020782	CNOT1	100	96.407	ENSAPEG00000022342	cnot1	95	96.407	Amphiprion_percula
ENSBTAG00000020782	CNOT1	97	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSBTAG00000020782	CNOT1	100	98.406	ENSAPLG00000007162	CNOT1	100	97.731	Anas_platyrhynchos
ENSBTAG00000020782	CNOT1	91	96.336	ENSACAG00000001602	CNOT1	98	96.336	Anolis_carolinensis
ENSBTAG00000020782	CNOT1	100	99.373	ENSANAG00000038198	CNOT1	100	96.858	Aotus_nancymaae
ENSBTAG00000020782	CNOT1	100	96.407	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSBTAG00000020782	CNOT1	100	96.982	ENSAMXG00000013170	cnot1	100	91.505	Astyanax_mexicanus
ENSBTAG00000020782	CNOT1	80	53.770	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSBTAG00000020782	CNOT1	100	99.705	ENSCJAG00000011318	CNOT1	100	99.705	Callithrix_jacchus
ENSBTAG00000020782	CNOT1	100	99.496	ENSCAFG00000008426	CNOT1	100	99.496	Canis_familiaris
ENSBTAG00000020782	CNOT1	100	99.430	ENSCAFG00020010156	CNOT1	100	99.430	Canis_lupus_dingo
ENSBTAG00000020782	CNOT1	100	100.000	ENSCHIG00000010452	CNOT1	100	100.000	Capra_hircus
ENSBTAG00000020782	CNOT1	100	99.874	ENSTSYG00000006888	CNOT1	100	99.874	Carlito_syrichta
ENSBTAG00000020782	CNOT1	100	98.802	ENSCPOG00000013026	CNOT1	100	95.160	Cavia_porcellus
ENSBTAG00000020782	CNOT1	100	98.802	ENSCCAG00000026333	CNOT1	100	98.148	Cebus_capucinus
ENSBTAG00000020782	CNOT1	100	99.790	ENSCATG00000032625	CNOT1	100	99.790	Cercocebus_atys
ENSBTAG00000020782	CNOT1	100	99.832	ENSCLAG00000006289	CNOT1	100	99.832	Chinchilla_lanigera
ENSBTAG00000020782	CNOT1	100	99.790	ENSCSAG00000004731	CNOT1	100	99.790	Chlorocebus_sabaeus
ENSBTAG00000020782	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSBTAG00000020782	CNOT1	98	98.606	ENSCPBG00000026222	CNOT1	99	98.611	Chrysemys_picta_bellii
ENSBTAG00000020782	CNOT1	100	82.258	ENSCING00000009149	-	95	82.258	Ciona_intestinalis
ENSBTAG00000020782	CNOT1	89	82.353	ENSCSAVG00000002414	-	94	81.984	Ciona_savignyi
ENSBTAG00000020782	CNOT1	100	98.805	ENSCANG00000040534	CNOT1	100	97.660	Colobus_angolensis_palliatus
ENSBTAG00000020782	CNOT1	100	99.411	ENSCGRG00001016365	Cnot1	100	99.411	Cricetulus_griseus_chok1gshd
ENSBTAG00000020782	CNOT1	100	99.411	ENSCGRG00000001714	Cnot1	100	99.411	Cricetulus_griseus_crigri
ENSBTAG00000020782	CNOT1	97	96.008	ENSCVAG00000018930	cnot1	95	96.008	Cyprinodon_variegatus
ENSBTAG00000020782	CNOT1	100	95.808	ENSDARG00000004174	cnot1	95	95.808	Danio_rerio
ENSBTAG00000020782	CNOT1	100	97.265	ENSDNOG00000013250	CNOT1	100	97.265	Dasypus_novemcinctus
ENSBTAG00000020782	CNOT1	99	68.815	FBgn0085436	Not1	94	68.530	Drosophila_melanogaster
ENSBTAG00000020782	CNOT1	84	97.590	ENSETEG00000012806	CNOT1	84	97.590	Echinops_telfairi
ENSBTAG00000020782	CNOT1	81	76.831	ENSEBUG00000011534	cnot1	95	76.831	Eptatretus_burgeri
ENSBTAG00000020782	CNOT1	100	98.805	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSBTAG00000020782	CNOT1	100	99.874	ENSECAG00000009889	CNOT1	100	99.907	Equus_caballus
ENSBTAG00000020782	CNOT1	90	99.451	ENSEEUG00000006015	CNOT1	90	99.451	Erinaceus_europaeus
ENSBTAG00000020782	CNOT1	100	92.529	ENSELUG00000014085	cnot1	100	89.541	Esox_lucius
ENSBTAG00000020782	CNOT1	100	99.580	ENSFCAG00000025155	CNOT1	100	99.580	Felis_catus
ENSBTAG00000020782	CNOT1	100	98.403	ENSFALG00000007285	CNOT1	100	97.769	Ficedula_albicollis
ENSBTAG00000020782	CNOT1	100	99.747	ENSFDAG00000013399	CNOT1	100	99.747	Fukomys_damarensis
ENSBTAG00000020782	CNOT1	100	95.609	ENSFHEG00000020574	cnot1	95	95.609	Fundulus_heteroclitus
ENSBTAG00000020782	CNOT1	90	95.290	ENSGMOG00000012864	cnot1	100	89.912	Gadus_morhua
ENSBTAG00000020782	CNOT1	100	98.204	ENSGALG00000002301	CNOT1	100	97.811	Gallus_gallus
ENSBTAG00000020782	CNOT1	100	96.579	ENSGAFG00000015005	cnot1	95	95.808	Gambusia_affinis
ENSBTAG00000020782	CNOT1	90	95.307	ENSGACG00000002606	cnot1	100	95.752	Gasterosteus_aculeatus
ENSBTAG00000020782	CNOT1	100	98.603	ENSGAGG00000022646	CNOT1	100	97.897	Gopherus_agassizii
ENSBTAG00000020782	CNOT1	100	99.705	ENSGGOG00000009547	CNOT1	100	99.705	Gorilla_gorilla
ENSBTAG00000020782	CNOT1	100	96.407	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSBTAG00000020782	CNOT1	100	99.663	ENSHGLG00000014322	CNOT1	100	99.663	Heterocephalus_glaber_female
ENSBTAG00000020782	CNOT1	100	95.020	ENSHCOG00000006501	cnot1	95	95.020	Hippocampus_comes
ENSBTAG00000020782	CNOT1	100	93.898	ENSIPUG00000011915	cnot1	100	89.388	Ictalurus_punctatus
ENSBTAG00000020782	CNOT1	100	99.663	ENSSTOG00000005490	CNOT1	100	99.663	Ictidomys_tridecemlineatus
ENSBTAG00000020782	CNOT1	100	99.074	ENSJJAG00000000633	Cnot1	100	99.074	Jaculus_jaculus
ENSBTAG00000020782	CNOT1	100	96.208	ENSKMAG00000006149	cnot1	95	96.208	Kryptolebias_marmoratus
ENSBTAG00000020782	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSBTAG00000020782	CNOT1	100	98.204	ENSLACG00000010869	CNOT1	100	95.160	Latimeria_chalumnae
ENSBTAG00000020782	CNOT1	100	96.607	ENSLOCG00000006324	cnot1	100	93.037	Lepisosteus_oculatus
ENSBTAG00000020782	CNOT1	100	99.622	ENSLAFG00000000098	CNOT1	100	99.622	Loxodonta_africana
ENSBTAG00000020782	CNOT1	100	99.537	ENSMFAG00000035888	CNOT1	100	99.537	Macaca_fascicularis
ENSBTAG00000020782	CNOT1	100	99.747	ENSMMUG00000014625	CNOT1	100	99.747	Macaca_mulatta
ENSBTAG00000020782	CNOT1	100	98.805	ENSMNEG00000031820	CNOT1	100	99.860	Macaca_nemestrina
ENSBTAG00000020782	CNOT1	100	99.430	ENSMLEG00000040933	CNOT1	100	98.359	Mandrillus_leucophaeus
ENSBTAG00000020782	CNOT1	100	94.012	ENSMAMG00000016524	cnot1	100	89.253	Mastacembelus_armatus
ENSBTAG00000020782	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSBTAG00000020782	CNOT1	100	98.204	ENSMGAG00000001908	CNOT1	100	97.559	Meleagris_gallopavo
ENSBTAG00000020782	CNOT1	100	99.663	ENSMICG00000007071	CNOT1	100	99.663	Microcebus_murinus
ENSBTAG00000020782	CNOT1	100	99.453	ENSMOCG00000017969	Cnot1	100	99.453	Microtus_ochrogaster
ENSBTAG00000020782	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSBTAG00000020782	CNOT1	100	98.008	ENSMODG00000014199	CNOT1	100	97.981	Monodelphis_domestica
ENSBTAG00000020782	CNOT1	100	96.208	ENSMALG00000008645	cnot1	95	96.208	Monopterus_albus
ENSBTAG00000020782	CNOT1	95	99.889	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	Mus_caroli
ENSBTAG00000020782	CNOT1	100	99.537	ENSMUSG00000036550	Cnot1	100	99.537	Mus_musculus
ENSBTAG00000020782	CNOT1	100	99.579	MGP_PahariEiJ_G0023028	Cnot1	100	99.579	Mus_pahari
ENSBTAG00000020782	CNOT1	100	99.537	MGP_SPRETEiJ_G0032549	Cnot1	100	99.537	Mus_spretus
ENSBTAG00000020782	CNOT1	100	99.874	ENSMPUG00000004830	CNOT1	100	99.874	Mustela_putorius_furo
ENSBTAG00000020782	CNOT1	100	99.200	ENSMLUG00000003728	CNOT1	100	99.200	Myotis_lucifugus
ENSBTAG00000020782	CNOT1	100	99.705	ENSNGAG00000018628	Cnot1	100	99.705	Nannospalax_galili
ENSBTAG00000020782	CNOT1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSBTAG00000020782	CNOT1	100	99.663	ENSNLEG00000003566	CNOT1	100	99.663	Nomascus_leucogenys
ENSBTAG00000020782	CNOT1	86	98.658	ENSMEUG00000006145	CNOT1	87	98.658	Notamacropus_eugenii
ENSBTAG00000020782	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSBTAG00000020782	CNOT1	100	99.705	ENSODEG00000016337	CNOT1	100	99.705	Octodon_degus
ENSBTAG00000020782	CNOT1	100	96.407	ENSONIG00000007358	cnot1	95	96.024	Oreochromis_niloticus
ENSBTAG00000020782	CNOT1	91	98.047	ENSOANG00000012109	CNOT1	100	98.402	Ornithorhynchus_anatinus
ENSBTAG00000020782	CNOT1	100	99.790	ENSOCUG00000006911	CNOT1	100	99.790	Oryctolagus_cuniculus
ENSBTAG00000020782	CNOT1	100	96.208	ENSORLG00000013734	cnot1	95	96.208	Oryzias_latipes
ENSBTAG00000020782	CNOT1	100	88.954	ENSORLG00020017012	cnot1	100	88.633	Oryzias_latipes_hni
ENSBTAG00000020782	CNOT1	100	88.870	ENSORLG00015007091	cnot1	100	88.381	Oryzias_latipes_hsok
ENSBTAG00000020782	CNOT1	100	88.208	ENSOMEG00000015124	cnot1	100	88.497	Oryzias_melastigma
ENSBTAG00000020782	CNOT1	100	99.705	ENSOGAG00000000543	CNOT1	100	99.705	Otolemur_garnettii
ENSBTAG00000020782	CNOT1	100	100.000	ENSOARG00000001567	CNOT1	100	100.000	Ovis_aries
ENSBTAG00000020782	CNOT1	100	99.747	ENSPPAG00000022013	CNOT1	100	99.747	Pan_paniscus
ENSBTAG00000020782	CNOT1	100	99.874	ENSPPRG00000004867	CNOT1	100	99.874	Panthera_pardus
ENSBTAG00000020782	CNOT1	100	99.874	ENSPTIG00000012589	CNOT1	100	99.874	Panthera_tigris_altaica
ENSBTAG00000020782	CNOT1	100	99.454	ENSPTRG00000008183	CNOT1	100	99.454	Pan_troglodytes
ENSBTAG00000020782	CNOT1	100	98.805	ENSPANG00000020901	CNOT1	100	96.228	Papio_anubis
ENSBTAG00000020782	CNOT1	97	93.800	ENSPKIG00000002914	CNOT1	99	93.258	Paramormyrops_kingsleyae
ENSBTAG00000020782	CNOT1	100	96.607	ENSPKIG00000023538	CNOT1	100	92.321	Paramormyrops_kingsleyae
ENSBTAG00000020782	CNOT1	100	98.204	ENSPSIG00000005499	CNOT1	100	97.769	Pelodiscus_sinensis
ENSBTAG00000020782	CNOT1	100	90.020	ENSPMAG00000009381	cnot1	95	89.662	Petromyzon_marinus
ENSBTAG00000020782	CNOT1	100	98.207	ENSPCIG00000007343	CNOT1	100	98.611	Phascolarctos_cinereus
ENSBTAG00000020782	CNOT1	99	96.610	ENSPFOG00000003497	cnot1	95	95.397	Poecilia_formosa
ENSBTAG00000020782	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSBTAG00000020782	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSBTAG00000020782	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSBTAG00000020782	CNOT1	100	99.705	ENSPPYG00000007410	CNOT1	100	99.705	Pongo_abelii
ENSBTAG00000020782	CNOT1	93	97.615	ENSPCAG00000003241	CNOT1	90	97.615	Procavia_capensis
ENSBTAG00000020782	CNOT1	100	99.413	ENSPCOG00000027139	CNOT1	100	99.413	Propithecus_coquereli
ENSBTAG00000020782	CNOT1	100	99.031	ENSPVAG00000004243	CNOT1	100	97.222	Pteropus_vampyrus
ENSBTAG00000020782	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSBTAG00000020782	CNOT1	100	96.982	ENSPNAG00000000246	cnot1	95	96.208	Pygocentrus_nattereri
ENSBTAG00000020782	CNOT1	100	99.537	ENSRNOG00000012271	Cnot1	100	99.537	Rattus_norvegicus
ENSBTAG00000020782	CNOT1	100	98.805	ENSRBIG00000044598	CNOT1	100	97.440	Rhinopithecus_bieti
ENSBTAG00000020782	CNOT1	100	99.790	ENSRROG00000000906	CNOT1	100	99.790	Rhinopithecus_roxellana
ENSBTAG00000020782	CNOT1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSBTAG00000020782	CNOT1	100	95.382	ENSSBOG00000029155	CNOT1	100	95.312	Saimiri_boliviensis_boliviensis
ENSBTAG00000020782	CNOT1	100	98.204	ENSSHAG00000012187	CNOT1	100	98.150	Sarcophilus_harrisii
ENSBTAG00000020782	CNOT1	100	90.584	ENSSFOG00015017614	cnot1	100	90.310	Scleropages_formosus
ENSBTAG00000020782	CNOT1	100	96.407	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSBTAG00000020782	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSBTAG00000020782	CNOT1	100	96.208	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSBTAG00000020782	CNOT1	86	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSBTAG00000020782	CNOT1	100	96.407	ENSSPAG00000018802	cnot1	95	96.407	Stegastes_partitus
ENSBTAG00000020782	CNOT1	100	99.732	ENSSSCG00000002799	CNOT1	100	99.732	Sus_scrofa
ENSBTAG00000020782	CNOT1	100	98.403	ENSTGUG00000005919	CNOT1	100	97.646	Taeniopygia_guttata
ENSBTAG00000020782	CNOT1	100	95.808	ENSTNIG00000018706	cnot1	95	95.808	Tetraodon_nigroviridis
ENSBTAG00000020782	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSBTAG00000020782	CNOT1	95	99.592	ENSTTRG00000008460	CNOT1	95	99.592	Tursiops_truncatus
ENSBTAG00000020782	CNOT1	100	99.874	ENSUAMG00000009251	CNOT1	100	99.874	Ursus_americanus
ENSBTAG00000020782	CNOT1	100	99.874	ENSUMAG00000021291	CNOT1	100	99.874	Ursus_maritimus
ENSBTAG00000020782	CNOT1	97	98.802	ENSVPAG00000008846	CNOT1	97	97.389	Vicugna_pacos
ENSBTAG00000020782	CNOT1	100	99.430	ENSVVUG00000024037	CNOT1	100	99.430	Vulpes_vulpes
ENSBTAG00000020782	CNOT1	100	99.394	ENSXETG00000015900	cnot1	95	99.394	Xenopus_tropicalis
ENSBTAG00000020782	CNOT1	100	96.781	ENSXCOG00000013552	cnot1	95	96.008	Xiphophorus_couchianus
ENSBTAG00000020782	CNOT1	100	96.781	ENSXMAG00000006031	cnot1	95	96.008	Xiphophorus_maculatus