EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSBTAG00000021058 (Gene tree)
Gene ID: 100140430
Gene Symbol: DDX42
Alias: -
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Bos_taurus
Status: putative
Strand: Plus strand
Length: 27710 bases
Position: chr19:48043369-48071078
Accession: 27968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSBTAP00000063772	ResIII	PF04851.15	1.8e-05	1	1
ENSBTAP00000062705	ResIII	PF04851.15	2.1e-05	1	1
ENSBTAP00000028046	ResIII	PF04851.15	2.2e-05	1	1
ENSBTAP00000061504	ResIII	PF04851.15	3.8e-05	1	1
ENSBTAP00000061486	ResIII	PF04851.15	4.2e-05	1	1
ENSBTAP00000063772	DEAD	PF00270.29	1.4e-45	1	1
ENSBTAP00000061504	DEAD	PF00270.29	2.4e-45	1	1
ENSBTAP00000061486	DEAD	PF00270.29	2.8e-45	1	1
ENSBTAP00000062705	DEAD	PF00270.29	2.8e-45	1	1
ENSBTAP00000028046	DEAD	PF00270.29	2.9e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSBTAT00000028046	-	2820	-	ENSBTAP00000028046	939 (aa)	-	E1BJD2
ENSBTAT00000074471	-	2121	-	ENSBTAP00000063772	706 (aa)	-	-
ENSBTAT00000083231	-	2778	-	ENSBTAP00000061486	925 (aa)	-	-
ENSBTAT00000068100	-	2787	-	ENSBTAP00000062705	928 (aa)	-	-
ENSBTAT00000084084	-	2634	-	ENSBTAP00000061504	877 (aa)	-	-

Gene Model

Click here to download ENSBTAG00000021058's gene model file

Pathways

Pathway ID	Pathway Name	Source
bta03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSBTAG00000021058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSBTAG00000021058	DDX42	61	36.971	ENSBTAG00000021814	-	68	36.971
ENSBTAG00000021058	DDX42	54	38.038	ENSBTAG00000021810	DDX23	51	38.038
ENSBTAG00000021058	DDX42	59	35.253	ENSBTAG00000046635	-	70	35.253
ENSBTAG00000021058	DDX42	53	34.257	ENSBTAG00000010313	DDX52	65	34.257
ENSBTAG00000021058	DDX42	50	30.959	ENSBTAG00000014490	DDX39B	87	30.446
ENSBTAG00000021058	DDX42	50	30.914	ENSBTAG00000020714	DDX19B	75	30.914
ENSBTAG00000021058	DDX42	50	34.309	ENSBTAG00000000811	DDX49	78	33.582
ENSBTAG00000021058	DDX42	61	38.178	ENSBTAG00000015187	DDX41	72	38.178
ENSBTAG00000021058	DDX42	51	30.851	ENSBTAG00000021820	DDX39A	86	30.851
ENSBTAG00000021058	DDX42	61	32.071	ENSBTAG00000020563	DDX59	69	32.644
ENSBTAG00000021058	DDX42	50	30.645	ENSBTAG00000003570	DDX19A	80	30.645
ENSBTAG00000021058	DDX42	76	37.276	ENSBTAG00000018423	DDX5	78	39.712
ENSBTAG00000021058	DDX42	56	37.681	ENSBTAG00000008871	DDX4	65	35.870
ENSBTAG00000021058	DDX42	60	42.725	ENSBTAG00000009887	DDX17	87	42.391
ENSBTAG00000021058	DDX42	54	37.226	ENSBTAG00000035907	DDX3X	69	36.854

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSBTAG00000021058	DDX42	98	96.286	ENSG00000198231	DDX42	100	98.077	Homo_sapiens
ENSBTAG00000021058	DDX42	97	76.312	ENSAPOG00000017675	ddx42	97	75.344	Acanthochromis_polyacanthus
ENSBTAG00000021058	DDX42	98	97.286	ENSAMEG00000003200	DDX42	100	95.248	Ailuropoda_melanoleuca
ENSBTAG00000021058	DDX42	89	81.056	ENSACIG00000007376	ddx42	99	71.518	Amphilophus_citrinellus
ENSBTAG00000021058	DDX42	92	80.543	ENSAOCG00000003520	ddx42	99	71.384	Amphiprion_ocellaris
ENSBTAG00000021058	DDX42	92	80.635	ENSAPEG00000000984	ddx42	99	71.429	Amphiprion_percula
ENSBTAG00000021058	DDX42	100	70.842	ENSATEG00000022920	ddx42	99	71.623	Anabas_testudineus
ENSBTAG00000021058	DDX42	97	90.216	ENSAPLG00000010544	DDX42	100	82.932	Anas_platyrhynchos
ENSBTAG00000021058	DDX42	98	88.160	ENSACAG00000003994	DDX42	99	83.369	Anolis_carolinensis
ENSBTAG00000021058	DDX42	100	95.299	ENSANAG00000035693	DDX42	99	96.733	Aotus_nancymaae
ENSBTAG00000021058	DDX42	92	80.602	ENSACLG00000025113	ddx42	99	72.293	Astatotilapia_calliptera
ENSBTAG00000021058	DDX42	88	82.671	ENSAMXG00000011435	ddx42	100	69.168	Astyanax_mexicanus
ENSBTAG00000021058	DDX42	82	51.669	WBGene00008119	C46F11.4	78	51.956	Caenorhabditis_elegans
ENSBTAG00000021058	DDX42	100	95.192	ENSCJAG00000019649	DDX42	99	97.650	Callithrix_jacchus
ENSBTAG00000021058	DDX42	100	95.459	ENSCAFG00000012818	DDX42	100	95.459	Canis_familiaris
ENSBTAG00000021058	DDX42	100	95.565	ENSCAFG00020026631	DDX42	100	95.565	Canis_lupus_dingo
ENSBTAG00000021058	DDX42	100	97.679	ENSCHIG00000014431	DDX42	100	97.679	Capra_hircus
ENSBTAG00000021058	DDX42	100	93.882	ENSTSYG00000001380	DDX42	100	93.354	Carlito_syrichta
ENSBTAG00000021058	DDX42	94	74.629	ENSCAPG00000013621	DDX42	94	74.629	Cavia_aperea
ENSBTAG00000021058	DDX42	100	94.872	ENSCPOG00000005633	DDX42	100	95.085	Cavia_porcellus
ENSBTAG00000021058	DDX42	97	96.542	ENSCCAG00000020612	DDX42	100	93.439	Cebus_capucinus
ENSBTAG00000021058	DDX42	100	94.872	ENSCATG00000030490	DDX42	100	94.338	Cercocebus_atys
ENSBTAG00000021058	DDX42	100	95.299	ENSCLAG00000003497	DDX42	100	94.771	Chinchilla_lanigera
ENSBTAG00000021058	DDX42	100	90.690	ENSCSAG00000003914	DDX42	100	90.167	Chlorocebus_sabaeus
ENSBTAG00000021058	DDX42	79	94.643	ENSCHOG00000006241	DDX42	79	94.643	Choloepus_hoffmanni
ENSBTAG00000021058	DDX42	97	89.316	ENSCPBG00000026682	DDX42	100	83.178	Chrysemys_picta_bellii
ENSBTAG00000021058	DDX42	65	63.248	ENSCING00000001837	-	94	66.667	Ciona_intestinalis
ENSBTAG00000021058	DDX42	53	70.052	ENSCSAVG00000002180	-	99	70.052	Ciona_savignyi
ENSBTAG00000021058	DDX42	100	94.979	ENSCANG00000034663	DDX42	99	96.978	Colobus_angolensis_palliatus
ENSBTAG00000021058	DDX42	100	94.231	ENSCGRG00001009775	Ddx42	100	93.483	Cricetulus_griseus_chok1gshd
ENSBTAG00000021058	DDX42	100	94.231	ENSCGRG00000011718	Ddx42	100	93.483	Cricetulus_griseus_crigri
ENSBTAG00000021058	DDX42	97	75.827	ENSCSEG00000021574	ddx42	99	70.170	Cynoglossus_semilaevis
ENSBTAG00000021058	DDX42	91	79.969	ENSCVAG00000011404	ddx42	99	70.383	Cyprinodon_variegatus
ENSBTAG00000021058	DDX42	88	82.047	ENSDARG00000037928	ddx42	99	69.055	Danio_rerio
ENSBTAG00000021058	DDX42	100	87.789	ENSDNOG00000007961	DDX42	100	87.474	Dasypus_novemcinctus
ENSBTAG00000021058	DDX42	97	91.810	ENSDORG00000004199	Ddx42	100	85.745	Dipodomys_ordii
ENSBTAG00000021058	DDX42	83	59.375	FBgn0036104	CG6418	84	56.437	Drosophila_melanogaster
ENSBTAG00000021058	DDX42	87	75.360	ENSEBUG00000001155	ddx42	91	72.414	Eptatretus_burgeri
ENSBTAG00000021058	DDX42	100	95.565	ENSEASG00005013089	DDX42	99	96.571	Equus_asinus_asinus
ENSBTAG00000021058	DDX42	100	95.565	ENSECAG00000022684	DDX42	100	95.565	Equus_caballus
ENSBTAG00000021058	DDX42	66	97.297	ENSEEUG00000009144	DDX42	82	97.297	Erinaceus_europaeus
ENSBTAG00000021058	DDX42	94	76.324	ENSELUG00000020593	ddx42	100	69.348	Esox_lucius
ENSBTAG00000021058	DDX42	100	95.987	ENSFCAG00000003499	DDX42	100	95.987	Felis_catus
ENSBTAG00000021058	DDX42	98	89.031	ENSFALG00000004675	DDX42	74	88.138	Ficedula_albicollis
ENSBTAG00000021058	DDX42	100	95.085	ENSFDAG00000020516	DDX42	100	95.085	Fukomys_damarensis
ENSBTAG00000021058	DDX42	97	75.966	ENSFHEG00000023290	ddx42	99	69.979	Fundulus_heteroclitus
ENSBTAG00000021058	DDX42	81	77.873	ENSGMOG00000004595	ddx42	79	77.292	Gadus_morhua
ENSBTAG00000021058	DDX42	97	87.746	ENSGALG00000000581	DDX42	100	81.715	Gallus_gallus
ENSBTAG00000021058	DDX42	91	79.389	ENSGAFG00000011846	ddx42	94	74.596	Gambusia_affinis
ENSBTAG00000021058	DDX42	92	75.000	ENSGACG00000009782	ddx42	99	69.005	Gasterosteus_aculeatus
ENSBTAG00000021058	DDX42	97	90.000	ENSGAGG00000024411	DDX42	99	83.039	Gopherus_agassizii
ENSBTAG00000021058	DDX42	100	94.765	ENSGGOG00000006779	DDX42	100	94.231	Gorilla_gorilla
ENSBTAG00000021058	DDX42	92	80.602	ENSHBUG00000008705	ddx42	99	72.505	Haplochromis_burtoni
ENSBTAG00000021058	DDX42	100	90.675	ENSHGLG00000010024	DDX42	100	90.139	Heterocephalus_glaber_female
ENSBTAG00000021058	DDX42	98	72.857	ENSHGLG00100007138	-	95	72.374	Heterocephalus_glaber_male
ENSBTAG00000021058	DDX42	100	94.192	ENSHGLG00100004479	-	100	93.664	Heterocephalus_glaber_male
ENSBTAG00000021058	DDX42	90	80.404	ENSHCOG00000003357	ddx42	97	74.453	Hippocampus_comes
ENSBTAG00000021058	DDX42	87	82.372	ENSIPUG00000013327	ddx42	100	69.239	Ictalurus_punctatus
ENSBTAG00000021058	DDX42	100	95.197	ENSSTOG00000008922	DDX42	100	94.883	Ictidomys_tridecemlineatus
ENSBTAG00000021058	DDX42	100	94.444	ENSJJAG00000011727	Ddx42	100	94.444	Jaculus_jaculus
ENSBTAG00000021058	DDX42	92	78.884	ENSKMAG00000009914	ddx42	99	71.022	Kryptolebias_marmoratus
ENSBTAG00000021058	DDX42	88	75.894	ENSLBEG00000004687	ddx42	99	66.738	Labrus_bergylta
ENSBTAG00000021058	DDX42	99	76.575	ENSLACG00000013476	DDX42	97	77.533	Latimeria_chalumnae
ENSBTAG00000021058	DDX42	97	80.347	ENSLOCG00000011764	ddx42	100	74.038	Lepisosteus_oculatus
ENSBTAG00000021058	DDX42	100	94.931	ENSLAFG00000003249	DDX42	100	94.931	Loxodonta_africana
ENSBTAG00000021058	DDX42	100	94.872	ENSMFAG00000031356	DDX42	100	94.338	Macaca_fascicularis
ENSBTAG00000021058	DDX42	100	94.894	ENSMMUG00000016762	DDX42	100	94.362	Macaca_mulatta
ENSBTAG00000021058	DDX42	100	94.872	ENSMNEG00000038250	DDX42	100	94.338	Macaca_nemestrina
ENSBTAG00000021058	DDX42	98	96.429	ENSMLEG00000043080	DDX42	100	93.901	Mandrillus_leucophaeus
ENSBTAG00000021058	DDX42	92	80.514	ENSMAMG00000021888	ddx42	98	71.280	Mastacembelus_armatus
ENSBTAG00000021058	DDX42	92	80.602	ENSMZEG00005023103	ddx42	99	72.293	Maylandia_zebra
ENSBTAG00000021058	DDX42	97	88.592	ENSMGAG00000001822	DDX42	100	81.921	Meleagris_gallopavo
ENSBTAG00000021058	DDX42	97	96.681	ENSMAUG00000020774	-	94	96.307	Mesocricetus_auratus
ENSBTAG00000021058	DDX42	100	95.299	ENSMICG00000009952	DDX42	100	94.872	Microcebus_murinus
ENSBTAG00000021058	DDX42	98	95.565	ENSMOCG00000015504	Ddx42	100	92.949	Microtus_ochrogaster
ENSBTAG00000021058	DDX42	89	75.781	ENSMMOG00000016963	ddx42	86	70.901	Mola_mola
ENSBTAG00000021058	DDX42	51	92.719	ENSMODG00000009917	-	98	95.717	Monodelphis_domestica
ENSBTAG00000021058	DDX42	92	80.152	ENSMALG00000007800	ddx42	99	71.444	Monopterus_albus
ENSBTAG00000021058	DDX42	100	94.444	MGP_CAROLIEiJ_G0017314	Ddx42	100	94.338	Mus_caroli
ENSBTAG00000021058	DDX42	100	94.444	ENSMUSG00000020705	Ddx42	100	94.338	Mus_musculus
ENSBTAG00000021058	DDX42	81	96.274	MGP_PahariEiJ_G0018444	-	100	98.361	Mus_pahari
ENSBTAG00000021058	DDX42	100	94.444	MGP_SPRETEiJ_G0018158	Ddx42	100	94.338	Mus_spretus
ENSBTAG00000021058	DDX42	100	95.776	ENSMPUG00000014921	DDX42	100	95.776	Mustela_putorius_furo
ENSBTAG00000021058	DDX42	98	96.000	ENSMLUG00000011645	DDX42	100	93.613	Myotis_lucifugus
ENSBTAG00000021058	DDX42	100	94.444	ENSNGAG00000021897	Ddx42	100	94.444	Nannospalax_galili
ENSBTAG00000021058	DDX42	94	75.505	ENSNBRG00000004466	ddx42	99	72.687	Neolamprologus_brichardi
ENSBTAG00000021058	DDX42	100	94.765	ENSNLEG00000004248	DDX42	99	96.839	Nomascus_leucogenys
ENSBTAG00000021058	DDX42	81	81.067	ENSMEUG00000013227	-	85	81.067	Notamacropus_eugenii
ENSBTAG00000021058	DDX42	98	96.143	ENSOPRG00000014960	DDX42	100	93.962	Ochotona_princeps
ENSBTAG00000021058	DDX42	100	92.457	ENSODEG00000007810	DDX42	100	92.457	Octodon_degus
ENSBTAG00000021058	DDX42	92	80.752	ENSONIG00000000734	ddx42	99	72.399	Oreochromis_niloticus
ENSBTAG00000021058	DDX42	75	90.824	ENSOANG00000000265	DDX42	100	90.909	Ornithorhynchus_anatinus
ENSBTAG00000021058	DDX42	97	96.254	ENSOCUG00000004304	DDX42	88	93.645	Oryctolagus_cuniculus
ENSBTAG00000021058	DDX42	90	79.846	ENSORLG00000002395	ddx42	100	71.761	Oryzias_latipes
ENSBTAG00000021058	DDX42	100	70.633	ENSORLG00020011621	ddx42	100	71.713	Oryzias_latipes_hni
ENSBTAG00000021058	DDX42	90	80.000	ENSORLG00015004487	ddx42	100	71.634	Oryzias_latipes_hsok
ENSBTAG00000021058	DDX42	91	80.551	ENSOMEG00000020093	ddx42	100	70.933	Oryzias_melastigma
ENSBTAG00000021058	DDX42	100	94.421	ENSOGAG00000006872	DDX42	100	94.000	Otolemur_garnettii
ENSBTAG00000021058	DDX42	100	98.523	ENSOARG00000013540	DDX42	100	98.523	Ovis_aries
ENSBTAG00000021058	DDX42	100	94.979	ENSPPAG00000007496	DDX42	100	94.444	Pan_paniscus
ENSBTAG00000021058	DDX42	100	95.776	ENSPPRG00000002740	DDX42	100	95.776	Panthera_pardus
ENSBTAG00000021058	DDX42	100	95.671	ENSPTIG00000009932	DDX42	100	95.671	Panthera_tigris_altaica
ENSBTAG00000021058	DDX42	100	94.979	ENSPTRG00000009523	DDX42	100	94.444	Pan_troglodytes
ENSBTAG00000021058	DDX42	100	94.872	ENSPANG00000020990	DDX42	100	94.338	Papio_anubis
ENSBTAG00000021058	DDX42	100	70.321	ENSPKIG00000002901	ddx42	100	69.836	Paramormyrops_kingsleyae
ENSBTAG00000021058	DDX42	94	91.336	ENSPSIG00000010289	DDX42	98	91.133	Pelodiscus_sinensis
ENSBTAG00000021058	DDX42	100	67.784	ENSPMGG00000009323	ddx42	100	69.493	Periophthalmus_magnuspinnatus
ENSBTAG00000021058	DDX42	100	94.344	ENSPEMG00000006755	Ddx42	100	94.023	Peromyscus_maniculatus_bairdii
ENSBTAG00000021058	DDX42	87	74.173	ENSPMAG00000005580	ddx42	100	72.215	Petromyzon_marinus
ENSBTAG00000021058	DDX42	97	93.103	ENSPCIG00000009093	DDX42	100	89.368	Phascolarctos_cinereus
ENSBTAG00000021058	DDX42	92	80.670	ENSPFOG00000014104	ddx42	100	69.928	Poecilia_formosa
ENSBTAG00000021058	DDX42	92	80.518	ENSPLAG00000010522	ddx42	100	69.928	Poecilia_latipinna
ENSBTAG00000021058	DDX42	92	80.518	ENSPMEG00000010744	ddx42	99	70.877	Poecilia_mexicana
ENSBTAG00000021058	DDX42	92	79.909	ENSPREG00000009926	ddx42	99	70.301	Poecilia_reticulata
ENSBTAG00000021058	DDX42	100	92.251	ENSPPYG00000008531	DDX42	100	91.728	Pongo_abelii
ENSBTAG00000021058	DDX42	97	89.337	ENSPCAG00000002474	DDX42	100	88.316	Procavia_capensis
ENSBTAG00000021058	DDX42	100	85.316	ENSPCOG00000001559	DDX42	98	88.365	Propithecus_coquereli
ENSBTAG00000021058	DDX42	98	94.571	ENSPVAG00000000160	DDX42	100	90.552	Pteropus_vampyrus
ENSBTAG00000021058	DDX42	90	80.282	ENSPNYG00000013954	ddx42	97	71.302	Pundamilia_nyererei
ENSBTAG00000021058	DDX42	87	82.665	ENSPNAG00000017352	ddx42	99	68.846	Pygocentrus_nattereri
ENSBTAG00000021058	DDX42	100	94.551	ENSRNOG00000009474	Ddx42	100	94.444	Rattus_norvegicus
ENSBTAG00000021058	DDX42	100	94.872	ENSRBIG00000004781	DDX42	99	96.835	Rhinopithecus_bieti
ENSBTAG00000021058	DDX42	100	94.872	ENSRROG00000029794	DDX42	100	94.338	Rhinopithecus_roxellana
ENSBTAG00000021058	DDX42	100	95.192	ENSSBOG00000029624	DDX42	100	94.658	Saimiri_boliviensis_boliviensis
ENSBTAG00000021058	DDX42	97	93.534	ENSSHAG00000012896	-	100	89.474	Sarcophilus_harrisii
ENSBTAG00000021058	DDX42	77	64.469	ENSSHAG00000007919	-	99	60.149	Sarcophilus_harrisii
ENSBTAG00000021058	DDX42	89	81.011	ENSSFOG00015014064	ddx42	83	79.665	Scleropages_formosus
ENSBTAG00000021058	DDX42	92	80.121	ENSSMAG00000009077	ddx42	99	71.202	Scophthalmus_maximus
ENSBTAG00000021058	DDX42	92	79.522	ENSSDUG00000022221	ddx42	99	70.964	Seriola_dumerili
ENSBTAG00000021058	DDX42	92	80.945	ENSSLDG00000018483	ddx42	99	71.413	Seriola_lalandi_dorsalis
ENSBTAG00000021058	DDX42	100	94.087	ENSSARG00000009847	DDX42	100	93.875	Sorex_araneus
ENSBTAG00000021058	DDX42	98	90.258	ENSSPUG00000018806	DDX42	100	82.924	Sphenodon_punctatus
ENSBTAG00000021058	DDX42	92	80.271	ENSSPAG00000013055	ddx42	99	71.898	Stegastes_partitus
ENSBTAG00000021058	DDX42	96	97.529	ENSSSCG00000017289	DDX42	97	95.567	Sus_scrofa
ENSBTAG00000021058	DDX42	98	89.700	ENSTGUG00000001931	DDX42	100	82.733	Taeniopygia_guttata
ENSBTAG00000021058	DDX42	91	78.811	ENSTRUG00000010711	ddx42	99	77.899	Takifugu_rubripes
ENSBTAG00000021058	DDX42	89	92.138	ENSTBEG00000010159	DDX42	99	92.368	Tupaia_belangeri
ENSBTAG00000021058	DDX42	100	95.992	ENSTTRG00000006962	DDX42	100	95.992	Tursiops_truncatus
ENSBTAG00000021058	DDX42	98	97.286	ENSUAMG00000007321	DDX42	100	95.112	Ursus_americanus
ENSBTAG00000021058	DDX42	98	97.286	ENSUMAG00000017438	DDX42	100	93.776	Ursus_maritimus
ENSBTAG00000021058	DDX42	95	98.601	ENSVPAG00000009633	DDX42	93	98.601	Vicugna_pacos
ENSBTAG00000021058	DDX42	100	95.776	ENSVVUG00000006095	DDX42	100	95.776	Vulpes_vulpes
ENSBTAG00000021058	DDX42	98	80.912	ENSXETG00000003245	ddx42	100	75.393	Xenopus_tropicalis
ENSBTAG00000021058	DDX42	89	80.945	ENSXCOG00000017560	ddx42	97	70.311	Xiphophorus_couchianus
ENSBTAG00000021058	DDX42	92	80.640	ENSXMAG00000008138	ddx42	100	71.188	Xiphophorus_maculatus